Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000130
CDS Infomation

pacid=37437052 polypeptide=PGSC0003DMP400000096 locus=PGSC0003DMG400000038 ID=PGSC0003DMT400000130.v4.03 annot-version=v4.03
Sequence

ATGTCAGTTGCCTGTTGTGTTCCAGTTGTTGAATGTGTATACTGCTTAGGTTGTGTACGT
TGGGTGTGGAAGAAGTTCCTTTATACTGCTGGCCGTGAAAGTGAGAATTGGGGACTTGCA
ATTGCCAGTGAGTTTGAGCCTGTGCCAAGGTTCTGTCGATATATTATGGCGGTATATGAG
GATGATATTAGAAATCCCATATCGACTCCACCTGGTGGATATGGCATTGATCCAGATTGG
GTTATTGTAAAAAAAAGTCATGAAGATACTCAAGGGAAGGTGTCTCCTTATTTGATTTAT
GTTGATCATCAGAATACTGATATAGTTGTAGCAATTAGGGGTCTTAATATGGCAAAGGAT
AGTGATTTTTTGGTCCTACTTGATGATAAACTTGGGCAAGCAGAATTTGATGGGGGGTAT
GTTCATAATGGTCTACTGAAGGCAGCTGAATGGGTTTGGGAAGCTGAATCACAACTTTTA
AGGGAATTGGTGGAGAGGTATCCAGATTATACCTTGACATTTGCTGGGCATTCTTTAGGG
GCAGGGGTGGTAACGCTGTTGACGATGTTGACTGTGAAGAACAGAGAAAAGTTGGGGCTC
TTAGACAGAAAAAGGATCAGGTGCTTTGCGATTGCTCCTACAAGATGTGTCTCGCTGAAT
TTGGCTGTGAGATATGCGGACATCATAAACTCTGTTGTACTTCAGGATGATTTCTTACCT
CGGACCACTGTAGCACTGGAACATGCTTTCAAGTCACTTCTCTGTTTCCCATGCTTGATG
TGCATAATGTGCCTAAAGGATACATTCACCATGGAGGAGAAGATGTTAAAAGATCCAAGA
CGCCTTTATGCTCCAGGTCGTCTTTATCATATTATTGTCAGGAAGCCCTTCAGCTCTGCT
AATATTAAACCCATTGTGAGGACTGCTATACCTGTTGATGGACGGTTTGAGCACATAGTT
CTTTCATGCAACATGACATCTGATCATGGCATTCTTCGGATACTGACAGAATCACAAAGA
ACAATTGATTTGATGTTGGAGAAGCATCAGAGTACAGATTCTATGAATATCCCCGAGCAG
CAGAGAATGGATAGACGGGACTCTCTCGCTAAGGAGCACATGGAGGAACACAAGGCTGCT
TTGCAAAGGGCAGTAGCACTGGATGTGCCCCAAGCATATTCTCCTTCTGCATATGGAACT
TTCCGCAACATAGAGGAAGGACCGGATTTTGGAAAACCGGGGGAGTCCTCTCTCACCATT
TCCCAAAAAAGGAGAGAAAGCTGGGATGAGTTAGCAGGGCGTCTTTTTTTAGACAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400000096
PEP Infomation

pacid=37437052 transcript=PGSC0003DMT400000130 locus=PGSC0003DMG400000038 ID=PGSC0003DMT400000130.v4.03 annot-version=v4.03
Sequence

MSVACCVPVVECVYCLGCVRWVWKKFLYTAGRESENWGLAIASEFEPVPRFCRYIMAVYE
DDIRNPISTPPGGYGIDPDWVIVKKSHEDTQGKVSPYLIYVDHQNTDIVVAIRGLNMAKD
SDFLVLLDDKLGQAEFDGGYVHNGLLKAAEWVWEAESQLLRELVERYPDYTLTFAGHSLG
AGVVTLLTMLTVKNREKLGLLDRKRIRCFAIAPTRCVSLNLAVRYADIINSVVLQDDFLP
RTTVALEHAFKSLLCFPCLMCIMCLKDTFTMEEKMLKDPRRLYAPGRLYHIIVRKPFSSA
NIKPIVRTAIPVDGRFEHIVLSCNMTSDHGILRILTESQRTIDLMLEKHQSTDSMNIPEQ
QRMDRRDSLAKEHMEEHKAALQRAVALDVPQAYSPSAYGTFRNIEEGPDFGKPGESSLTI
SQKRRESWDELAGRLFLDR*

Transcript Sequence

Transcript ID

PGSC0003DMT400000130
Transcript Infomation

pacid=37437052 locus=PGSC0003DMG400000038 ID=PGSC0003DMT400000130.v4.03 annot-version=v4.03
Sequence

ATGTCAGTTGCCTGTTGTGTTCCAGTTGTTGAATGTGTATACTGCTTAGGTTGTGTACGT
TGGGTGTGGAAGAAGTTCCTTTATACTGCTGGCCGTGAAAGTGAGAATTGGGGACTTGCA
ATTGCCAGTGAGTTTGAGCCTGTGCCAAGGTTCTGTCGATATATTATGGCGGTATATGAG
GATGATATTAGAAATCCCATATCGACTCCACCTGGTGGATATGGCATTGATCCAGATTGG
GTTATTGTAAAAAAAAGTCATGAAGATACTCAAGGGAAGGTGTCTCCTTATTTGATTTAT
GTTGATCATCAGAATACTGATATAGTTGTAGCAATTAGGGGTCTTAATATGGCAAAGGAT
AGTGATTTTTTGGTCCTACTTGATGATAAACTTGGGCAAGCAGAATTTGATGGGGGGTAT
GTTCATAATGGTCTACTGAAGGCAGCTGAATGGGTTTGGGAAGCTGAATCACAACTTTTA
AGGGAATTGGTGGAGAGGTATCCAGATTATACCTTGACATTTGCTGGGCATTCTTTAGGG
GCAGGGGTGGTAACGCTGTTGACGATGTTGACTGTGAAGAACAGAGAAAAGTTGGGGCTC
TTAGACAGAAAAAGGATCAGGTGCTTTGCGATTGCTCCTACAAGATGTGTCTCGCTGAAT
TTGGCTGTGAGATATGCGGACATCATAAACTCTGTTGTACTTCAGGATGATTTCTTACCT
CGGACCACTGTAGCACTGGAACATGCTTTCAAGTCACTTCTCTGTTTCCCATGCTTGATG
TGCATAATGTGCCTAAAGGATACATTCACCATGGAGGAGAAGATGTTAAAAGATCCAAGA
CGCCTTTATGCTCCAGGTCGTCTTTATCATATTATTGTCAGGAAGCCCTTCAGCTCTGCT
AATATTAAACCCATTGTGAGGACTGCTATACCTGTTGATGGACGGTTTGAGCACATAGTT
CTTTCATGCAACATGACATCTGATCATGGCATTCTTCGGATACTGACAGAATCACAAAGA
ACAATTGATTTGATGTTGGAGAAGCATCAGAGTACAGATTCTATGAATATCCCCGAGCAG
CAGAGAATGGATAGACGGGACTCTCTCGCTAAGGAGCACATGGAGGAACACAAGGCTGCT
TTGCAAAGGGCAGTAGCACTGGATGTGCCCCAAGCATATTCTCCTTCTGCATATGGAACT
TTCCGCAACATAGAGGAAGGACCGGATTTTGGAAAACCGGGGGAGTCCTCTCTCACCATT
TCCCAAAAAAGGAGAGAAAGCTGGGATGAGTTAGCAGGGCGTCTTTTTTTAGACAGATGA