Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000117
CDS Infomation

pacid=37439639 polypeptide=PGSC0003DMP400000088 locus=PGSC0003DMG400000031 ID=PGSC0003DMT400000117.v4.03 annot-version=v4.03
Sequence

ATGGTGCAAAAGTCGACTCGAATAGCAAGCAGGAAAAGACCGAAAATCGATCCTTTGTCT
GTTTATGAATTTACTGATGATGATTTATCAGTAGAAATTAGTTCTGATTCTGTCGATTCC
AAGTTGAATTCAACCCCTAAATCTGCTCGGAAAAACTCCACTGGAAGAAGGACTCGCTCT
CAGATGACTCCCGATGGAGCAATTGTGGGTACTGAATCTAATGCGATGAAATCCCCTAGA
ACGAAAGGTGAATTATCTAGAAAAAGGAAGGATGTTAATGCTGCTGGGAAAAATAAGGGT
AAATCTGTACAGGTGGATGAAGTTGTTACATCAAAAAAGAGAAAGATGTATGATGGACAA
AACGAAGAAGAGCCTCCAAGCTCCTCCAATTTGAAGACTTGGGATTTCTACATCCCACCA
AACAAACATTTCCACACGCGTGTAAGTTCGCACACAAATTGTAATGCTGTTACATTGTTG
AAAAGCAAGTTGGATGATAGACAGCTCCAGATCTTCAGGGGAACCCCATTCGGGTACTTT
CTAGATTTGCCTCGTGTAGTTGTACAGAACCAGCTTATACATTCCCTATTGCTCAGGCAG
GTGGTCCCGGAAAGAGAGGATGAACTGTGGTTTAAAGTGAACGGAACCAAGTTGCGTTTC
GGTCTGGCAGAATTGGGGATTATTACTGGCTTGCGATGTTGTGGTGATGCTGATAAGGGT
TATGAATCTAGTGATACCAATAGGTTGATGGATATGTACTTTCCTGGACTTGAAAAGGTA
CCCAAGCAATCACTGATTGACTGCTTCCTCCAAAAGAAATGGAGGTCGGACGAGGATGCG
GTCAAGATTGGTGTGTTGTATTTCATACACACATTCTTGATCTCAACTGCTAATATTAAC
ACATTCATCACAAAGGCTGATTTTTGTATTGTTGAGAGCGGGGATTATGAGACATTCCCT
TGGGGTATACTTGTATTTAGAGCCATGATGGAGTCCATAAACAATAGGTTGCGTGTGGGT
CTAAAGATGTATAGGCTTGGGGGTTTACCTTTGGCTTTGCAGTGTTGGTTCTACGAGTGC
TGCACTAATGCTGATGGTAAGTTGGCTCACCGGGTTGACAACAAAGTGCCTCGTATTCTT
AATTGGAAAATTGAGAAGCAACCGACCTTGAATGAGTTGTCTGGTGGGTTATTCAAGATC
AGAAGTGACAAGTTGAAGTTCAAGAATGTTTCTCCCACGGAGTTTGAGCAACTTCACTTG
GATTTGCCTGAATCATCTGGAAATCCAAATGATAAGGAGGTGGCATACAGAGATCTTCCT
GAAGTTCATCCTCGTGATGATGACTTTAGCTCTCCTCCTAAAAGAAGCAAAACTCAGCCC
AAAACCAAATTGGATTCCCCAGTGAATAATTTGGAGAGGAGTGCCGAGCTCAAACGACTT
TCAGATGAACAGTCAGAGTTGAAGAGTAATATTCGAGAGGTTTTCAAAGCAACTGAGTTG
CTCAAGAAACAAATGATGGTGTCATTTGCTGATGTCTTTAAAGCAATCGAGTCGTTGTCG
AAGAAACAGTCAGAAAAGGATAATTCAGAAGCATTGCATATTGATAGAAGAGATGGCCAC
CATGACAAACATGGTGATGGTGATTCCAATGGTTTTGACGCTAATAATGGCCATGGTAGT
GATGGCCCAGATCGTGGCAAGGACTCCCTTGGTGACAAGGAGAATAGCGAGAAAGTCAAT
ATTGGGGCCTTGAGTGGAATTACTACAAACACATAG

Peptide Sequence

PEP ID

PGSC0003DMP400000088
PEP Infomation

pacid=37439639 transcript=PGSC0003DMT400000117 locus=PGSC0003DMG400000031 ID=PGSC0003DMT400000117.v4.03 annot-version=v4.03
Sequence

MVQKSTRIASRKRPKIDPLSVYEFTDDDLSVEISSDSVDSKLNSTPKSARKNSTGRRTRS
QMTPDGAIVGTESNAMKSPRTKGELSRKRKDVNAAGKNKGKSVQVDEVVTSKKRKMYDGQ
NEEEPPSSSNLKTWDFYIPPNKHFHTRVSSHTNCNAVTLLKSKLDDRQLQIFRGTPFGYF
LDLPRVVVQNQLIHSLLLRQVVPEREDELWFKVNGTKLRFGLAELGIITGLRCCGDADKG
YESSDTNRLMDMYFPGLEKVPKQSLIDCFLQKKWRSDEDAVKIGVLYFIHTFLISTANIN
TFITKADFCIVESGDYETFPWGILVFRAMMESINNRLRVGLKMYRLGGLPLALQCWFYEC
CTNADGKLAHRVDNKVPRILNWKIEKQPTLNELSGGLFKIRSDKLKFKNVSPTEFEQLHL
DLPESSGNPNDKEVAYRDLPEVHPRDDDFSSPPKRSKTQPKTKLDSPVNNLERSAELKRL
SDEQSELKSNIREVFKATELLKKQMMVSFADVFKAIESLSKKQSEKDNSEALHIDRRDGH
HDKHGDGDSNGFDANNGHGSDGPDRGKDSLGDKENSEKVNIGALSGITTNT*

Transcript Sequence

Transcript ID

PGSC0003DMT400000117
Transcript Infomation

pacid=37439639 locus=PGSC0003DMG400000031 ID=PGSC0003DMT400000117.v4.03 annot-version=v4.03
Sequence

ATGGTGCAAAAGTCGACTCGAATAGCAAGCAGGAAAAGACCGAAAATCGATCCTTTGTCT
GTTTATGAATTTACTGATGATGATTTATCAGTAGAAATTAGTTCTGATTCTGTCGATTCC
AAGTTGAATTCAACCCCTAAATCTGCTCGGAAAAACTCCACTGGAAGAAGGACTCGCTCT
CAGATGACTCCCGATGGAGCAATTGTGGGTACTGAATCTAATGCGATGAAATCCCCTAGA
ACGAAAGGTGAATTATCTAGAAAAAGGAAGGATGTTAATGCTGCTGGGAAAAATAAGGGT
AAATCTGTACAGGTGGATGAAGTTGTTACATCAAAAAAGAGAAAGATGTATGATGGACAA
AACGAAGAAGAGCCTCCAAGCTCCTCCAATTTGAAGACTTGGGATTTCTACATCCCACCA
AACAAACATTTCCACACGCGTGTAAGTTCGCACACAAATTGTAATGCTGTTACATTGTTG
AAAAGCAAGTTGGATGATAGACAGCTCCAGATCTTCAGGGGAACCCCATTCGGGTACTTT
CTAGATTTGCCTCGTGTAGTTGTACAGAACCAGCTTATACATTCCCTATTGCTCAGGCAG
GTGGTCCCGGAAAGAGAGGATGAACTGTGGTTTAAAGTGAACGGAACCAAGTTGCGTTTC
GGTCTGGCAGAATTGGGGATTATTACTGGCTTGCGATGTTGTGGTGATGCTGATAAGGGT
TATGAATCTAGTGATACCAATAGGTTGATGGATATGTACTTTCCTGGACTTGAAAAGGTA
CCCAAGCAATCACTGATTGACTGCTTCCTCCAAAAGAAATGGAGGTCGGACGAGGATGCG
GTCAAGATTGGTGTGTTGTATTTCATACACACATTCTTGATCTCAACTGCTAATATTAAC
ACATTCATCACAAAGGCTGATTTTTGTATTGTTGAGAGCGGGGATTATGAGACATTCCCT
TGGGGTATACTTGTATTTAGAGCCATGATGGAGTCCATAAACAATAGGTTGCGTGTGGGT
CTAAAGATGTATAGGCTTGGGGGTTTACCTTTGGCTTTGCAGTGTTGGTTCTACGAGTGC
TGCACTAATGCTGATGGTAAGTTGGCTCACCGGGTTGACAACAAAGTGCCTCGTATTCTT
AATTGGAAAATTGAGAAGCAACCGACCTTGAATGAGTTGTCTGGTGGGTTATTCAAGATC
AGAAGTGACAAGTTGAAGTTCAAGAATGTTTCTCCCACGGAGTTTGAGCAACTTCACTTG
GATTTGCCTGAATCATCTGGAAATCCAAATGATAAGGAGGTGGCATACAGAGATCTTCCT
GAAGTTCATCCTCGTGATGATGACTTTAGCTCTCCTCCTAAAAGAAGCAAAACTCAGCCC
AAAACCAAATTGGATTCCCCAGTGAATAATTTGGAGAGGAGTGCCGAGCTCAAACGACTT
TCAGATGAACAGTCAGAGTTGAAGAGTAATATTCGAGAGGTTTTCAAAGCAACTGAGTTG
CTCAAGAAACAAATGATGGTGTCATTTGCTGATGTCTTTAAAGCAATCGAGTCGTTGTCG
AAGAAACAGTCAGAAAAGGATAATTCAGAAGCATTGCATATTGATAGAAGAGATGGCCAC
CATGACAAACATGGTGATGGTGATTCCAATGGTTTTGACGCTAATAATGGCCATGGTAGT
GATGGCCCAGATCGTGGCAAGGACTCCCTTGGTGACAAGGAGAATAGCGAGAAAGTCAAT
ATTGGGGCCTTGAGTGGAATTACTACAAACACATAG