Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000108
CDS Infomation

pacid=37437817 polypeptide=PGSC0003DMP400000081 locus=PGSC0003DMG401000029 ID=PGSC0003DMT400000108.v4.03 annot-version=v4.03
Sequence

ATGAGTAACCTCAAGCTTGGGGTTGAAGTTGTTGGTGCCCACAATCTTTTGTCTAAAGAT
GGCCAAGGTTCATCTAGTCCCTTTGTAGAGCTTCACTTTGATGGCCAAAAATTCCGCACC
ACAATCAAAGAAAAAGATTTGGACCCTGCTTGGAATGAAACTTTCTATTTCAACGTTTCT
GATCCTAATGACTTGTCCAGCCTCACACTTGAAGCTCTTGTTTTCAACAATAACAAATCA
AGCCAATCTAAATCATCTCTTGGGAAGGTCAAGATCAATGGATCATCCTTTGTTCCATAC
TCTGATGCTGTTGTTTTGCATTACCCTTTGGAAAAGGCAGGTGTTTTCTCGCGTACTAGG
GGAGAGCTTGGCCTGAAAGTATTTATAACTGATGATCCATCTGTTAGGGTATCAAACTCA
TTTCCTGCAACAGATTCTTCATCACATATTGGTTCCCTTTCAAGCCTAAATGATGAACCT
ACACAACGAGTTCCGGATTTCATCTCTGAACCAGTCGCTAATGGTAAAAAAGGGACTAGA
CGCACATTCCACCACCTGCCAAACGTGAAGCAACAGCAACAAGAGCCTTATTCTTCCTTT
GCAGAATCCAGTCAACCGATAAGATTTGGGCCTGATCAGATGAAATCTACCTCTCAGGGG
CCGAAAGTAGTGCGGATGTACTCAGGTTCATCTTCACAGCCAGCTGAATATTCATTGAAA
GAGACAAGCCCTGTCCTTGGAGGAGGGCGTATAGTAGGGGGTCGAGTTGTTCGAGGTGGC
AGAAAATCCAGCACATATGACCTTGTTGAGCCTATGCAATTCCTGTTTGTAAGAGTTGTG
AAAGCACAAGATTTGCCTTCTAAAGATATCACAGGAAGTCTTGACCCTTATGTTGAAGTA
AGAGTTGGGAACTACAAAGGAGTCACACAACACTTCGAGAAAAATCAAAGTCCAGAATGG
AATACAGTATTTGCTTTTTCTAAAGAAAGAATGCAGTCTTCTGTTTTGGATGTTGTGGTC
AAGGATAAGGATATGTTGAAAGATGACTTTGTTGGGATTGTTCGAGTTGATCTGCATGAA
GTTCCAACCCGAGTTGCTCCAGATAGTCCATTGGCTCCAGAGTGGTATCGCCTGGAAAAC
AAGAAAGGGGAGAAAAAGAAGGGGGAACTGATGCTTGCTGTGTGGATTGGTACACAAGCT
GACGAAGCATTTCCCGATGCTTTCCATACAGATGTAGCTAGTCCAATAGATATGTCAGTG
CCGTCCACCCAAATCCGCGGAAAAGTGTACCATTCTCCTAGGCTGTGGTATGTTCGTGTC
AATGTTATTGAAGCACAAGACTTAGTTGTGTCAGAGAAAAATCGTATTCCTGATGTCTTT
GTGAAGGCTCGGATTGGTATCCAGTTTCTGAGGACTAAGCCAATTAGATCTCAAACTATG
AATGCTATGTGGAATGAGGATCTGATGTTCGTTGCTGCTGAGCCATTTGAAGAACATCTG
ATACTTTCAGTTGAAGATCGTGTTGCTTCCAACAAAGATGAGGCCCTGGGAGTGGTCATT
ATACCATTAACCACTGTTGAAAAGCGTGCAGATGATCGATTTGTTCGATCAAGATGGTAC
AACCTCCAAGAACCAGGTTCAGCTGAGATTGAAGAGCCAAAGAAGAAAGAAAAGTTTTCC
AGTAGGATCCATCTTCGTGTAACACTTGATGGAGGATACCATGTACTTGATGAGTCAACT
CATTATAGTAGTGATCTTCGACCTACGGCAAAGCAGCTGTGGAAGCCATCAATTGGTATC
TTGGAATTAGGTATCCTGAATGTTGATGGACTACACCCATCAAAAACAAGAGATGGAAGG
GGTACAACAGATACATATTGTGTGGCGAAGTATGGTCATAAGTGGGTGCGGACCAGGACG
GTTATCGACAGCTTAAATCCGAAGTTTAATGAGCAATACACTTGGGAAGTCTATGACCCA
GCAACTGTTCTGACAGTTGGGGTGTTTGACAATGGACAGCTTGAAGAAAAAGGTTCAAAT
GGCAAAATAGACATGAAAATTGGGAAGGTTCGTATTCGGGTCTCAACACTTGAAACTGGT
CGAGTATACACGCATTCTTATCCATTGCTCATCCTTCACCCCTCGGGTGTGAAGAAGATG
GGAGAATTGCATCTCGCCATACGATTTTCATGTGCATCAATGGTCAACATGATGTTTCTC
TACTCTAGACCGCTTTTACCAAAAATGCATTATGTGAAGCCATTGTCTGTAACGCAGCAA
GATATGCTGCGACATCAAGCTGTAAATATTGTGGCTGCAAGGCTAAGCCGTGCAGAACCT
CCTCTCAGAAAAGAAGTTGTTGAATACATGAGTGATGCAGATGCACACCTCTGGAGCATG
AGGCGCAGCAAAGCGAACTTTTTCAGACTGATGTCTGTCTTTAGAGGATTACTCTCTGTT
GGGAACTGGTTCGGAGATGTATGCATGTGGAAGAATCCTATCACGACATCATTAGTACAT
GTTCTCTTCCTTATGCTTGTCTGTTTCCCAGAATTAATCCTCCCAACGGTGTTTCTGTAC
ATGTGCCTAATAGGGCTTTGGAACTATCAGTACCGGCCAAGGTACCCTCCTCATATGAAC
ATAAGAATATCACATGCTGATTCAACACATCCTGATGAGCTTGATGAGGAATTCGACACC
TTTCCTACATCACGGAGTTCAGATCTTGTTAGGATGAGGTATGATCGTCTTAGAAGTCTA
GCTGGTCGAATTCAGACAGTAGTAGGAGATGTGGCGACACAAGGTGAGCGAATCCAGGCA
TTGCTTAGTTGGCGAGACCCGCGTGCCACTGTACTATTCATTATATTCTGCCTGCTCGCC
GCCATTGTGTTGTATTCTACACCTTTTCAGATATTTGCTGGCCTGTCTGGCTTTTATGCA
ATGAGGCATCCCAGGTTCCGCCACAAATTGCCATCAGCACCCCTGAATTTCTTTCGCCGG
CTTCCAGCTCAGACTGATAGTATGCTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400000081
PEP Infomation

pacid=37437817 transcript=PGSC0003DMT400000108 locus=PGSC0003DMG401000029 ID=PGSC0003DMT400000108.v4.03 annot-version=v4.03
Sequence

MSNLKLGVEVVGAHNLLSKDGQGSSSPFVELHFDGQKFRTTIKEKDLDPAWNETFYFNVS
DPNDLSSLTLEALVFNNNKSSQSKSSLGKVKINGSSFVPYSDAVVLHYPLEKAGVFSRTR
GELGLKVFITDDPSVRVSNSFPATDSSSHIGSLSSLNDEPTQRVPDFISEPVANGKKGTR
RTFHHLPNVKQQQQEPYSSFAESSQPIRFGPDQMKSTSQGPKVVRMYSGSSSQPAEYSLK
ETSPVLGGGRIVGGRVVRGGRKSSTYDLVEPMQFLFVRVVKAQDLPSKDITGSLDPYVEV
RVGNYKGVTQHFEKNQSPEWNTVFAFSKERMQSSVLDVVVKDKDMLKDDFVGIVRVDLHE
VPTRVAPDSPLAPEWYRLENKKGEKKKGELMLAVWIGTQADEAFPDAFHTDVASPIDMSV
PSTQIRGKVYHSPRLWYVRVNVIEAQDLVVSEKNRIPDVFVKARIGIQFLRTKPIRSQTM
NAMWNEDLMFVAAEPFEEHLILSVEDRVASNKDEALGVVIIPLTTVEKRADDRFVRSRWY
NLQEPGSAEIEEPKKKEKFSSRIHLRVTLDGGYHVLDESTHYSSDLRPTAKQLWKPSIGI
LELGILNVDGLHPSKTRDGRGTTDTYCVAKYGHKWVRTRTVIDSLNPKFNEQYTWEVYDP
ATVLTVGVFDNGQLEEKGSNGKIDMKIGKVRIRVSTLETGRVYTHSYPLLILHPSGVKKM
GELHLAIRFSCASMVNMMFLYSRPLLPKMHYVKPLSVTQQDMLRHQAVNIVAARLSRAEP
PLRKEVVEYMSDADAHLWSMRRSKANFFRLMSVFRGLLSVGNWFGDVCMWKNPITTSLVH
VLFLMLVCFPELILPTVFLYMCLIGLWNYQYRPRYPPHMNIRISHADSTHPDELDEEFDT
FPTSRSSDLVRMRYDRLRSLAGRIQTVVGDVATQGERIQALLSWRDPRATVLFIIFCLLA
AIVLYSTPFQIFAGLSGFYAMRHPRFRHKLPSAPLNFFRRLPAQTDSML*

Transcript Sequence

Transcript ID

PGSC0003DMT400000108
Transcript Infomation

pacid=37437817 locus=PGSC0003DMG401000029 ID=PGSC0003DMT400000108.v4.03 annot-version=v4.03
Sequence

ATGAGTAACCTCAAGCTTGGGGTTGAAGTTGTTGGTGCCCACAATCTTTTGTCTAAAGAT
GGCCAAGGTTCATCTAGTCCCTTTGTAGAGCTTCACTTTGATGGCCAAAAATTCCGCACC
ACAATCAAAGAAAAAGATTTGGACCCTGCTTGGAATGAAACTTTCTATTTCAACGTTTCT
GATCCTAATGACTTGTCCAGCCTCACACTTGAAGCTCTTGTTTTCAACAATAACAAATCA
AGCCAATCTAAATCATCTCTTGGGAAGGTCAAGATCAATGGATCATCCTTTGTTCCATAC
TCTGATGCTGTTGTTTTGCATTACCCTTTGGAAAAGGCAGGTGTTTTCTCGCGTACTAGG
GGAGAGCTTGGCCTGAAAGTATTTATAACTGATGATCCATCTGTTAGGGTATCAAACTCA
TTTCCTGCAACAGATTCTTCATCACATATTGGTTCCCTTTCAAGCCTAAATGATGAACCT
ACACAACGAGTTCCGGATTTCATCTCTGAACCAGTCGCTAATGGTAAAAAAGGGACTAGA
CGCACATTCCACCACCTGCCAAACGTGAAGCAACAGCAACAAGAGCCTTATTCTTCCTTT
GCAGAATCCAGTCAACCGATAAGATTTGGGCCTGATCAGATGAAATCTACCTCTCAGGGG
CCGAAAGTAGTGCGGATGTACTCAGGTTCATCTTCACAGCCAGCTGAATATTCATTGAAA
GAGACAAGCCCTGTCCTTGGAGGAGGGCGTATAGTAGGGGGTCGAGTTGTTCGAGGTGGC
AGAAAATCCAGCACATATGACCTTGTTGAGCCTATGCAATTCCTGTTTGTAAGAGTTGTG
AAAGCACAAGATTTGCCTTCTAAAGATATCACAGGAAGTCTTGACCCTTATGTTGAAGTA
AGAGTTGGGAACTACAAAGGAGTCACACAACACTTCGAGAAAAATCAAAGTCCAGAATGG
AATACAGTATTTGCTTTTTCTAAAGAAAGAATGCAGTCTTCTGTTTTGGATGTTGTGGTC
AAGGATAAGGATATGTTGAAAGATGACTTTGTTGGGATTGTTCGAGTTGATCTGCATGAA
GTTCCAACCCGAGTTGCTCCAGATAGTCCATTGGCTCCAGAGTGGTATCGCCTGGAAAAC
AAGAAAGGGGAGAAAAAGAAGGGGGAACTGATGCTTGCTGTGTGGATTGGTACACAAGCT
GACGAAGCATTTCCCGATGCTTTCCATACAGATGTAGCTAGTCCAATAGATATGTCAGTG
CCGTCCACCCAAATCCGCGGAAAAGTGTACCATTCTCCTAGGCTGTGGTATGTTCGTGTC
AATGTTATTGAAGCACAAGACTTAGTTGTGTCAGAGAAAAATCGTATTCCTGATGTCTTT
GTGAAGGCTCGGATTGGTATCCAGTTTCTGAGGACTAAGCCAATTAGATCTCAAACTATG
AATGCTATGTGGAATGAGGATCTGATGTTCGTTGCTGCTGAGCCATTTGAAGAACATCTG
ATACTTTCAGTTGAAGATCGTGTTGCTTCCAACAAAGATGAGGCCCTGGGAGTGGTCATT
ATACCATTAACCACTGTTGAAAAGCGTGCAGATGATCGATTTGTTCGATCAAGATGGTAC
AACCTCCAAGAACCAGGTTCAGCTGAGATTGAAGAGCCAAAGAAGAAAGAAAAGTTTTCC
AGTAGGATCCATCTTCGTGTAACACTTGATGGAGGATACCATGTACTTGATGAGTCAACT
CATTATAGTAGTGATCTTCGACCTACGGCAAAGCAGCTGTGGAAGCCATCAATTGGTATC
TTGGAATTAGGTATCCTGAATGTTGATGGACTACACCCATCAAAAACAAGAGATGGAAGG
GGTACAACAGATACATATTGTGTGGCGAAGTATGGTCATAAGTGGGTGCGGACCAGGACG
GTTATCGACAGCTTAAATCCGAAGTTTAATGAGCAATACACTTGGGAAGTCTATGACCCA
GCAACTGTTCTGACAGTTGGGGTGTTTGACAATGGACAGCTTGAAGAAAAAGGTTCAAAT
GGCAAAATAGACATGAAAATTGGGAAGGTTCGTATTCGGGTCTCAACACTTGAAACTGGT
CGAGTATACACGCATTCTTATCCATTGCTCATCCTTCACCCCTCGGGTGTGAAGAAGATG
GGAGAATTGCATCTCGCCATACGATTTTCATGTGCATCAATGGTCAACATGATGTTTCTC
TACTCTAGACCGCTTTTACCAAAAATGCATTATGTGAAGCCATTGTCTGTAACGCAGCAA
GATATGCTGCGACATCAAGCTGTAAATATTGTGGCTGCAAGGCTAAGCCGTGCAGAACCT
CCTCTCAGAAAAGAAGTTGTTGAATACATGAGTGATGCAGATGCACACCTCTGGAGCATG
AGGCGCAGCAAAGCGAACTTTTTCAGACTGATGTCTGTCTTTAGAGGATTACTCTCTGTT
GGGAACTGGTTCGGAGATGTATGCATGTGGAAGAATCCTATCACGACATCATTAGTACAT
GTTCTCTTCCTTATGCTTGTCTGTTTCCCAGAATTAATCCTCCCAACGGTGTTTCTGTAC
ATGTGCCTAATAGGGCTTTGGAACTATCAGTACCGGCCAAGGTACCCTCCTCATATGAAC
ATAAGAATATCACATGCTGATTCAACACATCCTGATGAGCTTGATGAGGAATTCGACACC
TTTCCTACATCACGGAGTTCAGATCTTGTTAGGATGAGGTATGATCGTCTTAGAAGTCTA
GCTGGTCGAATTCAGACAGTAGTAGGAGATGTGGCGACACAAGGTGAGCGAATCCAGGCA
TTGCTTAGTTGGCGAGACCCGCGTGCCACTGTACTATTCATTATATTCTGCCTGCTCGCC
GCCATTGTGTTGTATTCTACACCTTTTCAGATATTTGCTGGCCTGTCTGGCTTTTATGCA
ATGAGGCATCCCAGGTTCCGCCACAAATTGCCATCAGCACCCCTGAATTTCTTTCGCCGG
CTTCCAGCTCAGACTGATAGTATGCTATAG