Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000100
CDS Infomation

pacid=37436773 polypeptide=PGSC0003DMP400000078 locus=PGSC0003DMG400000028 ID=PGSC0003DMT400000100.v4.03 annot-version=v4.03
Sequence

ATGAAAGAAAAGAATGAGAAGTTGAAGAATGAATTTTGGCTAAGGCCAGCATTTCAAAAC
AATTCACCAAAATGGAAATATTTCAAGAAGAAAACTACAACAACCTTAACGAAATCGTTG
ACTCTATTCTTCTTTCTGCTCGTAGTTTCTCTCTTGTTCTTCGCCGGATGGTTTGATCTT
GCAAAATACACTAGTCATTTCTACAAAAAAGTAGCAGCCCCAACAATCCAACCTCAAATT
CTTGAATTCCCTTTGGATTGTAGTGCATGGAATCAATCCAATAAATGTCCAATAAATTAC
CCTACTTCTTATAAACCCTTAAACCCTAATAACTCAACATGTCCTGAGTATTTTAGATGG
ATTCATGAAGATTTAAAGCCATGGAAAGAGACGGGAATTACTAGGGAAATGTTGGAGAAA
GGAAAAAGAAATGCACATTTTAGGTTAATTATATTGGATGGCAAAATTTATGTTGAAAAA
TATAACACAAAGAAATTTATTCAAACTAGACATTTGTACACTATGTATGGAATTGTACAA
CTACTAAGGTGGTACCCTGGAAAATTACCTAATTTGGAGATCATGTTTGATACCGATGAC
CGGCCGGTCGTCCGATCGAAAGACTACCGGAAACCTAACTCCGGCCCACCACCGTTGTTC
CGATACTGTTCAGATTGGCATAGTTTGGATATTGTCTTCCCGGATTGGTCGTTTTGGGGC
TGGGCTGAGACAAATATAAGGCCATGGAGAAGTGTGATTAAGGAGATAAAAGAAGGTAAC
AAAAGAACAAAATGGAAGGATAGGGTACCCTTTGCTTATTGGAAGGGAAATCCACATGTT
TCACCAATTAGAAAAGATCTCATGAAGTGTAATATTACTGACAAACAAAACTTTCATACT
CTCTTATATGTCCAGGACTGGGATGATCAATCCAAAAAGGGTTTCAAGGAATCAGATCTT
GCAAATCAATGCACCCATAGATATAAAATATATGTGGAAGGATGGGCATGGTCAGTGAGT
GAAAAATACATTTTGGCTTGTGATTCACCAACATTGTACATAAAACCTCATTTCCATGAT
TTCTTCATGAGAGGAATGATTCCTCAACAACATTATTGGCCCATTAGAGAAAATAATAAA
TGTGGTTCCCTCAACTTTGCTGTTCAATGGGGCAACAATCACACTCACAAGGCAGAGGCA
ATTGGAAAGGCAGGAAGTGATTTCATTCATGAAGATATGAAGATGGAATATGTATTTGAT
TACATATTTCATTTGTTAAATGAATATGCAAAGTTGCTAAAATTTGAACCAAAAATTCCA
TCAGAGGCAGTTGAAATATGTTCAGAATCATTGGCATGCACTTCACAAGGTATATGGAGA
AAATTCATGGAAGAAGGGTTAGAGAAATCTCCTAGTTATACAAATCCATGTACACTTCCT
CCACCTTATGAACCTCAAGAAATCAAATCATTTGTTGAACAAAAGATAAAGGCCACACAA
CAAGTGGAGGCATGGGAAAATGAGTTTTGGAGTAACCAAAACAACAAGCAATTGTTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400000078
PEP Infomation

pacid=37436773 transcript=PGSC0003DMT400000100 locus=PGSC0003DMG400000028 ID=PGSC0003DMT400000100.v4.03 annot-version=v4.03
Sequence

MKEKNEKLKNEFWLRPAFQNNSPKWKYFKKKTTTTLTKSLTLFFFLLVVSLLFFAGWFDL
AKYTSHFYKKVAAPTIQPQILEFPLDCSAWNQSNKCPINYPTSYKPLNPNNSTCPEYFRW
IHEDLKPWKETGITREMLEKGKRNAHFRLIILDGKIYVEKYNTKKFIQTRHLYTMYGIVQ
LLRWYPGKLPNLEIMFDTDDRPVVRSKDYRKPNSGPPPLFRYCSDWHSLDIVFPDWSFWG
WAETNIRPWRSVIKEIKEGNKRTKWKDRVPFAYWKGNPHVSPIRKDLMKCNITDKQNFHT
LLYVQDWDDQSKKGFKESDLANQCTHRYKIYVEGWAWSVSEKYILACDSPTLYIKPHFHD
FFMRGMIPQQHYWPIRENNKCGSLNFAVQWGNNHTHKAEAIGKAGSDFIHEDMKMEYVFD
YIFHLLNEYAKLLKFEPKIPSEAVEICSESLACTSQGIWRKFMEEGLEKSPSYTNPCTLP
PPYEPQEIKSFVEQKIKATQQVEAWENEFWSNQNNKQLL*

Transcript Sequence

Transcript ID

PGSC0003DMT400000100
Transcript Infomation

pacid=37436773 locus=PGSC0003DMG400000028 ID=PGSC0003DMT400000100.v4.03 annot-version=v4.03
Sequence

ATGAAAGAAAAGAATGAGAAGTTGAAGAATGAATTTTGGCTAAGGCCAGCATTTCAAAAC
AATTCACCAAAATGGAAATATTTCAAGAAGAAAACTACAACAACCTTAACGAAATCGTTG
ACTCTATTCTTCTTTCTGCTCGTAGTTTCTCTCTTGTTCTTCGCCGGATGGTTTGATCTT
GCAAAATACACTAGTCATTTCTACAAAAAAGTAGCAGCCCCAACAATCCAACCTCAAATT
CTTGAATTCCCTTTGGATTGTAGTGCATGGAATCAATCCAATAAATGTCCAATAAATTAC
CCTACTTCTTATAAACCCTTAAACCCTAATAACTCAACATGTCCTGAGTATTTTAGATGG
ATTCATGAAGATTTAAAGCCATGGAAAGAGACGGGAATTACTAGGGAAATGTTGGAGAAA
GGAAAAAGAAATGCACATTTTAGGTTAATTATATTGGATGGCAAAATTTATGTTGAAAAA
TATAACACAAAGAAATTTATTCAAACTAGACATTTGTACACTATGTATGGAATTGTACAA
CTACTAAGGTGGTACCCTGGAAAATTACCTAATTTGGAGATCATGTTTGATACCGATGAC
CGGCCGGTCGTCCGATCGAAAGACTACCGGAAACCTAACTCCGGCCCACCACCGTTGTTC
CGATACTGTTCAGATTGGCATAGTTTGGATATTGTCTTCCCGGATTGGTCGTTTTGGGGC
TGGGCTGAGACAAATATAAGGCCATGGAGAAGTGTGATTAAGGAGATAAAAGAAGGTAAC
AAAAGAACAAAATGGAAGGATAGGGTACCCTTTGCTTATTGGAAGGGAAATCCACATGTT
TCACCAATTAGAAAAGATCTCATGAAGTGTAATATTACTGACAAACAAAACTTTCATACT
CTCTTATATGTCCAGGACTGGGATGATCAATCCAAAAAGGGTTTCAAGGAATCAGATCTT
GCAAATCAATGCACCCATAGATATAAAATATATGTGGAAGGATGGGCATGGTCAGTGAGT
GAAAAATACATTTTGGCTTGTGATTCACCAACATTGTACATAAAACCTCATTTCCATGAT
TTCTTCATGAGAGGAATGATTCCTCAACAACATTATTGGCCCATTAGAGAAAATAATAAA
TGTGGTTCCCTCAACTTTGCTGTTCAATGGGGCAACAATCACACTCACAAGGCAGAGGCA
ATTGGAAAGGCAGGAAGTGATTTCATTCATGAAGATATGAAGATGGAATATGTATTTGAT
TACATATTTCATTTGTTAAATGAATATGCAAAGTTGCTAAAATTTGAACCAAAAATTCCA
TCAGAGGCAGTTGAAATATGTTCAGAATCATTGGCATGCACTTCACAAGGTATATGGAGA
AAATTCATGGAAGAAGGGTTAGAGAAATCTCCTAGTTATACAAATCCATGTACACTTCCT
CCACCTTATGAACCTCAAGAAATCAAATCATTTGTTGAACAAAAGATAAAGGCCACACAA
CAAGTGGAGGCATGGGAAAATGAGTTTTGGAGTAACCAAAACAACAAGCAATTGTTATAG