Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000034
CDS Infomation

pacid=37437850 polypeptide=PGSC0003DMP400000033 locus=PGSC0003DMG400000010 ID=PGSC0003DMT400000034.v4.03 annot-version=v4.03
Sequence

ATGGCATTGAAGAGGGGTTCATCAGGTTTAGGCACCCAAAGGAACAAAAGTGCTGGATCT
AGCTTCCCAATTGTGATTCTTATCTTCTGTTCATTCCTTGCTCCTTTGATTTTCTTTGTT
GGACGTGGCCTCTACACCTCTACTTCAGTTGATCATAATGATTTTTCAACCACTTCAAGT
AAACAGGATATAGATTGGAGAGAGAGGCTTGCTCTTCAACAAATCAAACCTTTGTTGACA
AAAGAGGTGATTGACATCATCAAAGCCAGTACAGATGATTTAGGACCTCTCAGTCTTGAT
TCTCTTAGAAAGAACAATTTGTCTGCCTCATGGAAATTTATCGGGCAAGAAATTGTAGCC
AAGAAAAGTGCAGCTGATGCAAAGGTAAATAAGCCAAGTCAGGTAGCTGCTGCAGATTCC
AAACCAGAAATCACCAGAGGCAAACGCGATGGTCCTGTTAATGGGGATCATTCGCAGTTT
GTGGATTCAACTGCCAAGTTGGCCAGAAGGCAATTGCGAGAGAGAAGACGTGAAAAGCGT
GCTGCTGATTTAGTGAAACGAGATGATGATGTGACTGTGAAGCTTGAAAATGCTGCCATC
GAACGTTCTAAGTCAGTTGACTCTTCTGTGCTGGGGAAGTACAGTGTATGGAGGAAAGAA
ACTGATAATGATAACACTGATTCAACAGTGCGCTTGATGCGAGATCAAATGATTATGGCA
AGGGTGTACATAAGCATTGCAACAATGAAAAAAAAACTGGATTTGGCCCGTGACTTACAG
GCTCGGCTTAAAGAAAGTCAGCGTGCATTAGGTGATGCAGGCTCGGATGCTGATCTAACA
CGCAGTGCACATGAGAAAATGAAAGCTATGGGCCAAGTGCTATCTAAAGCTAGAGAGCAG
CTCTATGATTGCAAGCTTGTGACAACGAAACTGAGAGCAATGCTGCAATCTGCAGATGAG
CAAGTCAGAGGTTTGAAGAGGCAGAGCACTTTTTTGAGCCAATTAGCTGCAAAGACTATA
CCGAATGGGATTCACTGCTTGTCCATGCGTTTGACTATTGATTATTACCTCCTTCCTCCT
GAAAAAAGAAAGTTCCCAAGAAGTGAGAATCTGGAAAATCCTGCTCTCTTCCATTATGCC
CTATTTTCTGATAATGTTTTGGCTGCTTCAGTCGTTGTCAACTCAACTATCGTGAATGCT
AAGGAACCAGAGAAACATGTATTTCATCTAGTCAGTGATAAATTGAACTTTGGAGCTATG
AACATGTGGTTTTTGTTGAACCCTCCTGGAAAAGCTACAATCCATGTTGAAAATGTTGAT
GAATTCAAGTGGCTTAATTCTTCATATTGTCCTGTTCTGCGGCAGCTAGAGTCTGCTGCA
ATGAAAGAATACTATTTCAAGGCTGCTCATCCCAACACCCTATCTGCTGGTTCTTCTAAC
TTGAAGTACCGGAACCCCAAATATCTTTCAATGCTCAATCACCTAAGGTTTTATCTCCCT
CAGGTTTATCCAAAATTGAATAAAATCCTTTTTCTTGATGATGACATTGTTGTTCAGAAA
GACTTAACAGGATTGTGGTCAGTTGACCTTCATGGGAAAGTGAATGGTGCAGTTGAGACC
TGTGGTCAGAGTTTTCATCGTTTTGACAAGTACCTAAACTTCTCAAATCCTCATATTGCG
AGAAACTTTGATCCAAATGCCTGTGGGTGGGCTTATGGCATGAACATGTTTGATCTTAAG
GAGTGGAAGAAGCAAGATATAACGGGCATTTATCACAAGTGGCAAAACATGAATGAAGAC
AGGGTCCTCTGGAAACTGGGTACTCTACCTCCAGGGCTGATCACATTTTACGGGCTCACA
CATCCACTAGACAAGTCGTGGCATGTGCTTGGTTTGGGATACAATCCAAGCATTGATCGG
TCAGATATTGAGAATGCAGCTGTGGTACATTACAACGGTAACATGAAACCGTGGTTGGAG
TTGGCAATGACAAAGTACAGGCCATACTGGACCAAATATATAAAATTTGACCATCCATAC
ATGCGCAGCTGTAAACTAAGTGAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400000033
PEP Infomation

pacid=37437850 transcript=PGSC0003DMT400000034 locus=PGSC0003DMG400000010 ID=PGSC0003DMT400000034.v4.03 annot-version=v4.03
Sequence

MALKRGSSGLGTQRNKSAGSSFPIVILIFCSFLAPLIFFVGRGLYTSTSVDHNDFSTTSS
KQDIDWRERLALQQIKPLLTKEVIDIIKASTDDLGPLSLDSLRKNNLSASWKFIGQEIVA
KKSAADAKVNKPSQVAAADSKPEITRGKRDGPVNGDHSQFVDSTAKLARRQLRERRREKR
AADLVKRDDDVTVKLENAAIERSKSVDSSVLGKYSVWRKETDNDNTDSTVRLMRDQMIMA
RVYISIATMKKKLDLARDLQARLKESQRALGDAGSDADLTRSAHEKMKAMGQVLSKAREQ
LYDCKLVTTKLRAMLQSADEQVRGLKRQSTFLSQLAAKTIPNGIHCLSMRLTIDYYLLPP
EKRKFPRSENLENPALFHYALFSDNVLAASVVVNSTIVNAKEPEKHVFHLVSDKLNFGAM
NMWFLLNPPGKATIHVENVDEFKWLNSSYCPVLRQLESAAMKEYYFKAAHPNTLSAGSSN
LKYRNPKYLSMLNHLRFYLPQVYPKLNKILFLDDDIVVQKDLTGLWSVDLHGKVNGAVET
CGQSFHRFDKYLNFSNPHIARNFDPNACGWAYGMNMFDLKEWKKQDITGIYHKWQNMNED
RVLWKLGTLPPGLITFYGLTHPLDKSWHVLGLGYNPSIDRSDIENAAVVHYNGNMKPWLE
LAMTKYRPYWTKYIKFDHPYMRSCKLSE*

Transcript Sequence

Transcript ID

PGSC0003DMT400000034
Transcript Infomation

pacid=37437850 locus=PGSC0003DMG400000010 ID=PGSC0003DMT400000034.v4.03 annot-version=v4.03
Sequence

ATGGCATTGAAGAGGGGTTCATCAGGTTTAGGCACCCAAAGGAACAAAAGTGCTGGATCT
AGCTTCCCAATTGTGATTCTTATCTTCTGTTCATTCCTTGCTCCTTTGATTTTCTTTGTT
GGACGTGGCCTCTACACCTCTACTTCAGTTGATCATAATGATTTTTCAACCACTTCAAGT
AAACAGGATATAGATTGGAGAGAGAGGCTTGCTCTTCAACAAATCAAACCTTTGTTGACA
AAAGAGGTGATTGACATCATCAAAGCCAGTACAGATGATTTAGGACCTCTCAGTCTTGAT
TCTCTTAGAAAGAACAATTTGTCTGCCTCATGGAAATTTATCGGGCAAGAAATTGTAGCC
AAGAAAAGTGCAGCTGATGCAAAGGTAAATAAGCCAAGTCAGGTAGCTGCTGCAGATTCC
AAACCAGAAATCACCAGAGGCAAACGCGATGGTCCTGTTAATGGGGATCATTCGCAGTTT
GTGGATTCAACTGCCAAGTTGGCCAGAAGGCAATTGCGAGAGAGAAGACGTGAAAAGCGT
GCTGCTGATTTAGTGAAACGAGATGATGATGTGACTGTGAAGCTTGAAAATGCTGCCATC
GAACGTTCTAAGTCAGTTGACTCTTCTGTGCTGGGGAAGTACAGTGTATGGAGGAAAGAA
ACTGATAATGATAACACTGATTCAACAGTGCGCTTGATGCGAGATCAAATGATTATGGCA
AGGGTGTACATAAGCATTGCAACAATGAAAAAAAAACTGGATTTGGCCCGTGACTTACAG
GCTCGGCTTAAAGAAAGTCAGCGTGCATTAGGTGATGCAGGCTCGGATGCTGATCTAACA
CGCAGTGCACATGAGAAAATGAAAGCTATGGGCCAAGTGCTATCTAAAGCTAGAGAGCAG
CTCTATGATTGCAAGCTTGTGACAACGAAACTGAGAGCAATGCTGCAATCTGCAGATGAG
CAAGTCAGAGGTTTGAAGAGGCAGAGCACTTTTTTGAGCCAATTAGCTGCAAAGACTATA
CCGAATGGGATTCACTGCTTGTCCATGCGTTTGACTATTGATTATTACCTCCTTCCTCCT
GAAAAAAGAAAGTTCCCAAGAAGTGAGAATCTGGAAAATCCTGCTCTCTTCCATTATGCC
CTATTTTCTGATAATGTTTTGGCTGCTTCAGTCGTTGTCAACTCAACTATCGTGAATGCT
AAGGAACCAGAGAAACATGTATTTCATCTAGTCAGTGATAAATTGAACTTTGGAGCTATG
AACATGTGGTTTTTGTTGAACCCTCCTGGAAAAGCTACAATCCATGTTGAAAATGTTGAT
GAATTCAAGTGGCTTAATTCTTCATATTGTCCTGTTCTGCGGCAGCTAGAGTCTGCTGCA
ATGAAAGAATACTATTTCAAGGCTGCTCATCCCAACACCCTATCTGCTGGTTCTTCTAAC
TTGAAGTACCGGAACCCCAAATATCTTTCAATGCTCAATCACCTAAGGTTTTATCTCCCT
CAGGTTTATCCAAAATTGAATAAAATCCTTTTTCTTGATGATGACATTGTTGTTCAGAAA
GACTTAACAGGATTGTGGTCAGTTGACCTTCATGGGAAAGTGAATGGTGCAGTTGAGACC
TGTGGTCAGAGTTTTCATCGTTTTGACAAGTACCTAAACTTCTCAAATCCTCATATTGCG
AGAAACTTTGATCCAAATGCCTGTGGGTGGGCTTATGGCATGAACATGTTTGATCTTAAG
GAGTGGAAGAAGCAAGATATAACGGGCATTTATCACAAGTGGCAAAACATGAATGAAGAC
AGGGTCCTCTGGAAACTGGGTACTCTACCTCCAGGGCTGATCACATTTTACGGGCTCACA
CATCCACTAGACAAGTCGTGGCATGTGCTTGGTTTGGGATACAATCCAAGCATTGATCGG
TCAGATATTGAGAATGCAGCTGTGGTACATTACAACGGTAACATGAAACCGTGGTTGGAG
TTGGCAATGACAAAGTACAGGCCATACTGGACCAAATATATAAAATTTGACCATCCATAC
ATGCGCAGCTGTAAACTAAGTGAATGA