Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000013
CDS Infomation

pacid=37439820 polypeptide=PGSC0003DMP400000013 locus=PGSC0003DMG400000005 ID=PGSC0003DMT400000013.v4.03 annot-version=v4.03
Sequence

ATGGTTACCACAGTAAATGAGCATATTATAGAGACAACTCCAACTTCGGTGCATACTAGT
TCTGCAGAGACTTCGTTTCTCCCTTTGTCATTATGCCTTACTTTGTTGAGAGACTTGGAA
ACATTAATTGAAGTAGTAGCTGAGCAGCTCTATGGCGAAGATAAAAAATGGAATTTGATT
GCTCTTACAGAGGCTGCCAAGGTGTGCGTGAGACTGGCTGCTTTCAGAACTACAGGATAT
AAAATGCTTTTGCAAGGTGGGGAGACTGAGAATTTGGAACATTCAGATGATTTGAGTCCC
CAAGGAAACATGGGGCACTTAAGGGAGCCTATCCAAAATCAAGGACTGGGTGTCAATCAC
CCTCAGGGTTTGAACTCGTGGAATCTTGAGGGTAGGGCAATGTCCGCCTTAAGTAGCTTT
GGTCAGAATGCTAGGATGGTTTCTGAGCCGACTTGGTTGCGCAGGGTTCAACAGCAGCAA
GCAATTTTGGAACCTCCAGCTAAGATAATCAGAAATCCGAGTCTGTCAACCTTCTTATCT
GAGAAGGGTATTCGTGGAGGGTTATTTGTGACTGGGGAGACTATGTTTGTCCTAAGACCA
CTTATATATGTCTTGCTGGTAAGGAAGTATGGAACACAATCATGGTTTCCTTGGTTCATC
TCCGTGGCTGTGGATCTCATAGGAAACAGCATGCTATCAGCCACAACAATGTCCCAAGAC
AGCAGGAAAGATCAGCATTTTCAATTTTCTAAATCAGAGAAGGATGAGTTAAAAAGAAGG
AAGCTGTTGTGGGTGCTTTACCTCATGCGAGATCCATTTTTCTCCAAATACACCCGGCGA
AGACTTGAAAGCACTCAAAAGACTGTAGAACCTGTTCCTGTAGTTGGATTTTTTGCAGAA
AAACTTATTGAACTCCTTATTGGAGCCCAGACTAGATACACTTACATGTCTGGTTCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400000013
PEP Infomation

pacid=37439820 transcript=PGSC0003DMT400000013 locus=PGSC0003DMG400000005 ID=PGSC0003DMT400000013.v4.03 annot-version=v4.03
Sequence

MVTTVNEHIIETTPTSVHTSSAETSFLPLSLCLTLLRDLETLIEVVAEQLYGEDKKWNLI
ALTEAAKVCVRLAAFRTTGYKMLLQGGETENLEHSDDLSPQGNMGHLREPIQNQGLGVNH
PQGLNSWNLEGRAMSALSSFGQNARMVSEPTWLRRVQQQQAILEPPAKIIRNPSLSTFLS
EKGIRGGLFVTGETMFVLRPLIYVLLVRKYGTQSWFPWFISVAVDLIGNSMLSATTMSQD
SRKDQHFQFSKSEKDELKRRKLLWVLYLMRDPFFSKYTRRRLESTQKTVEPVPVVGFFAE
KLIELLIGAQTRYTYMSGS*

Transcript Sequence

Transcript ID

PGSC0003DMT400000013
Transcript Infomation

pacid=37439820 locus=PGSC0003DMG400000005 ID=PGSC0003DMT400000013.v4.03 annot-version=v4.03
Sequence

ATGGTTACCACAGTAAATGAGCATATTATAGAGACAACTCCAACTTCGGTGCATACTAGT
TCTGCAGAGACTTCGTTTCTCCCTTTGTCATTATGCCTTACTTTGTTGAGAGACTTGGAA
ACATTAATTGAAGTAGTAGCTGAGCAGCTCTATGGCGAAGATAAAAAATGGAATTTGATT
GCTCTTACAGAGGCTGCCAAGGTGTGCGTGAGACTGGCTGCTTTCAGAACTACAGGATAT
AAAATGCTTTTGCAAGGTGGGGAGACTGAGAATTTGGAACATTCAGATGATTTGAGTCCC
CAAGGAAACATGGGGCACTTAAGGGAGCCTATCCAAAATCAAGGACTGGGTGTCAATCAC
CCTCAGGGTTTGAACTCGTGGAATCTTGAGGGTAGGGCAATGTCCGCCTTAAGTAGCTTT
GGTCAGAATGCTAGGATGGTTTCTGAGCCGACTTGGTTGCGCAGGGTTCAACAGCAGCAA
GCAATTTTGGAACCTCCAGCTAAGATAATCAGAAATCCGAGTCTGTCAACCTTCTTATCT
GAGAAGGGTATTCGTGGAGGGTTATTTGTGACTGGGGAGACTATGTTTGTCCTAAGACCA
CTTATATATGTCTTGCTGGTAAGGAAGTATGGAACACAATCATGGTTTCCTTGGTTCATC
TCCGTGGCTGTGGATCTCATAGGAAACAGCATGCTATCAGCCACAACAATGTCCCAAGAC
AGCAGGAAAGATCAGCATTTTCAATTTTCTAAATCAGAGAAGGATGAGTTAAAAAGAAGG
AAGCTGTTGTGGGTGCTTTACCTCATGCGAGATCCATTTTTCTCCAAATACACCCGGCGA
AGACTTGAAAGCACTCAAAAGACTGTAGAACCTGTTCCTGTAGTTGGATTTTTTGCAGAA
AAACTTATTGAACTCCTTATTGGAGCCCAGACTAGATACACTTACATGTCTGGTTCTTGA