Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400000010
CDS Infomation

pacid=37441292 polypeptide=PGSC0003DMP400000010 locus=PGSC0003DMG400000004 ID=PGSC0003DMT400000010.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCAATAATCAAGATTTACCAGAAGCCACAGTTCAAAACGTGCTAGAACAAGAT
ACCCTTAAGTGGGTATTTGTAGGGGGTAAAGGTGGGGTTGGAAAAACTACATGTAGTTCA
ATTCTTGGTATTCTTCTTTCTCAGTTCAGATCTTCTGTTCTTATCATATCTACTGACCCT
GCTCACAATCTCAGTGATGCCTTCCAGCAACGCTTTACCAAGTCCCCCACTCTTGTTAAT
GGCTTCACCAATTTGTATGCCATGGAAATCGATCCAACTGTGGAGAAAGAAGACTCAGTC
AGTTCAGATGGGATGGACGATTTTTTGTCTGATTTGACAAACGCAATTCCTGGAATTGAT
GAAGCTATGAGTTTTGCAGAGATGCTAAAATTGGTGCAAACAATGGACTATTCAGTAATA
GTGTTTGATACAGCCCCAACTGGACATACTCTTCGGCTGTTACAATTCCCGTCGACTCTA
GAGAAAGGGCTCGCCAAAGTGATGAGTTTGAAGAATAGATTTGGGGGCATGCTGAGTCAG
ATGACTCGACTATTGGGTGTTGATGAGGAATTTGGGGAGGCTGCTATCCTTGGCAAGCTT
GAAGGCATGAAAGGTATTATTGAAGAAGTGAACAGACAGTTTAAGGACCCAGACTTGACA
ACATTTGTTTGTGTTTGCATTCCGGAATTCCTCTCCCTATATGAGACTGAAAGACTAGTT
CAGGAACTTGCTAAATTTGAGATCGATACACACAACATTATAATTAACCAGGTGATTTTT
GACGAAGAAGTTGTTGAATCCAAGCTGCTGAAGGCTAGAATGCGGATGCAACAGAAATAC
TTGGATCAGTTCTACATGTTATATGATGACTTTAACATTACGAAGTTGCCTTTGCTGCCA
CAAGAGGTTTGTGGCGTTGATGCCCTGAAAGAATTTTCGCATCATTTTGTAACGCCATAC
CAGCCTTCTCTTGCTCGAGGCTCGGTGGAGGAGCTGCAGAATAGAGTTGCTGCATTGAAA
GAACAGTTGAAAGATGCTGAAGCGGAATTAGAGAAAGTTCAAAAAGGCAAACAGAAGATA
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400000010
PEP Infomation

pacid=37441292 transcript=PGSC0003DMT400000010 locus=PGSC0003DMG400000004 ID=PGSC0003DMT400000010.v4.03 annot-version=v4.03
Sequence

MASNNQDLPEATVQNVLEQDTLKWVFVGGKGGVGKTTCSSILGILLSQFRSSVLIISTDP
AHNLSDAFQQRFTKSPTLVNGFTNLYAMEIDPTVEKEDSVSSDGMDDFLSDLTNAIPGID
EAMSFAEMLKLVQTMDYSVIVFDTAPTGHTLRLLQFPSTLEKGLAKVMSLKNRFGGMLSQ
MTRLLGVDEEFGEAAILGKLEGMKGIIEEVNRQFKDPDLTTFVCVCIPEFLSLYETERLV
QELAKFEIDTHNIIINQVIFDEEVVESKLLKARMRMQQKYLDQFYMLYDDFNITKLPLLP
QEVCGVDALKEFSHHFVTPYQPSLARGSVEELQNRVAALKEQLKDAEAELEKVQKGKQKI
*

Transcript Sequence

Transcript ID

PGSC0003DMT400000010
Transcript Infomation

pacid=37441292 locus=PGSC0003DMG400000004 ID=PGSC0003DMT400000010.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCAATAATCAAGATTTACCAGAAGCCACAGTTCAAAACGTGCTAGAACAAGAT
ACCCTTAAGTGGGTATTTGTAGGGGGTAAAGGTGGGGTTGGAAAAACTACATGTAGTTCA
ATTCTTGGTATTCTTCTTTCTCAGTTCAGATCTTCTGTTCTTATCATATCTACTGACCCT
GCTCACAATCTCAGTGATGCCTTCCAGCAACGCTTTACCAAGTCCCCCACTCTTGTTAAT
GGCTTCACCAATTTGTATGCCATGGAAATCGATCCAACTGTGGAGAAAGAAGACTCAGTC
AGTTCAGATGGGATGGACGATTTTTTGTCTGATTTGACAAACGCAATTCCTGGAATTGAT
GAAGCTATGAGTTTTGCAGAGATGCTAAAATTGGTGCAAACAATGGACTATTCAGTAATA
GTGTTTGATACAGCCCCAACTGGACATACTCTTCGGCTGTTACAATTCCCGTCGACTCTA
GAGAAAGGGCTCGCCAAAGTGATGAGTTTGAAGAATAGATTTGGGGGCATGCTGAGTCAG
ATGACTCGACTATTGGGTGTTGATGAGGAATTTGGGGAGGCTGCTATCCTTGGCAAGCTT
GAAGGCATGAAAGGTATTATTGAAGAAGTGAACAGACAGTTTAAGGACCCAGACTTGACA
ACATTTGTTTGTGTTTGCATTCCGGAATTCCTCTCCCTATATGAGACTGAAAGACTAGTT
CAGGAACTTGCTAAATTTGAGATCGATACACACAACATTATAATTAACCAGGTGATTTTT
GACGAAGAAGTTGTTGAATCCAAGCTGCTGAAGGCTAGAATGCGGATGCAACAGAAATAC
TTGGATCAGTTCTACATGTTATATGATGACTTTAACATTACGAAGTTGCCTTTGCTGCCA
CAAGAGGTTTGTGGCGTTGATGCCCTGAAAGAATTTTCGCATCATTTTGTAACGCCATAC
CAGCCTTCTCTTGCTCGAGGCTCGGTGGAGGAGCTGCAGAATAGAGTTGCTGCATTGAAA
GAACAGTTGAAAGATGCTGAAGCGGAATTAGAGAAAGTTCAAAAAGGCAAACAGAAGATA
TAA