Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr8g039910.1
CDS Infomation

| disease resistance protein (TIR-NBS-LRR class) | HC | chr8:14829697-14834485 | 20140818
Sequence

ATGGCCGGTTCAGGTTCGTATTCCTATGTCTACGATGTGTTCATCAGCTTTAGAGGGGAG
GATACTCGGCTAGGGTTTACTGGATTTCTGTACAAGACTCTATCTGAAAAGGGATTCCAC
ACCTTCATTGACCACCACGCTGACGCGGGAAGAGGAACAACGAAGACACTTGTAGATGCA
ATTGAAGAGTCCAGGATTGGGATTGTTGTTTTTTCTGAGAACTATGCTTCCTCCACATGG
TGTCTGGATGAACTTGCGTACATTATTGACTCCTTTTCCAATAAGAAAAACTTCCGTCGA
TCTGTTTTCCCAGTATTTTACAACGTAGATCCTTCTCACGTGCGACATCAGAGTGGGATT
TATGGACAGGCACTTGACTCGCACCAGAAGAACAACAACTTCAATTCAGAGAAATTGAAC
AAATGGAAGAACGCTCTCAAACAAGCAGCTAATTTGTCCGGTTTCCATTTTAAACATGGG
GATGGATATGAATATGAATTAATTGACAAGATTGTAGACTTGGTCTCCACCAAAATTGAT
TCCACCCCTTATTTACGTGTTGTGGATCACCCAATTGGTCTCAATTATCGAGTGTTAGAA
CTAAACTGGCTTCTCAATCATAATACTCATGCTGCTACTGCCACCGTTGGATCCCATGGA
CTCAAACTGCTCGGTATCTACGGTATGGGTGGAATAGGGAAAACAACCCTTGCTCGAGCT
GTATTCAATTTCATTTCCCCCCAATTTGATGCCTTTTGTTTCCTCGAAGATGTCAGAGAA
AATTCAGCAAACCACGGCTTAGTACATCTTCAACAAACTCTTCTCGCCACCTTAGCTGGA
CAGAAGAAGAAGAAGAAAGACTTCCAATTAGCAAGCATCAGTGAAGGACTTCTGCTATTA
AAGAATATGCTCCACCGCAAGAAGGTCCTTTTGGTTCTTGATGACGTTAACAGCTCAGAT
CAGTTGCAAGCTACTCTTGGAAGAGGCCTCGACACTTTTGGTTATGGAACCACCATCATC
ATTACTACCCGGGACAAACACTTCCTAACAACTCACGGGGTTCATACGACATACAAGGTA
GAGGAGTTGACCAAGGATGAGTCCCTCGAGTTGCTTTCTTGGAATGCTTTCAAGACCAAC
AAAATTTATCCAGATTATATCGACCTGTTAAACCGCGTAACAACTTGCGCATCTGGCCTT
CCTTTGGCTTTGGAGGTTATAGGCTCATACCTGCATGGGAAAGGAGTAAAAGAATGGGAA
TCTGCATTAGACTCCTATGAAAAGATTCCTTCTAAAGATATCCAAACCATACTTAAGCAA
ACCTACAATGCTTTGGATGGAGATCTCAGGCAACTTTTTCTCGACATCGCATGTTTCTTC
AAAGGATACGAACTCTCAGAGGTTGAATACCTACTCAGTGCTCACCACGGTTACTGCTTC
AAACCCCACCGTTTCAGATTCTTGCTGGAAACATCTCTCATCAAGATTGACGAGCACAAT
CATGTGAAAATGCATGACTTGATACGGGACATGGCCAGAGAAATCGTGAGGCAGGAATCA
CCCGACCACCCCGGCAAACGCAGCAGGCTATGGCTTACTACGGATATCGTCGAAGTTTTA
GAAAAAAACACGGGAACAAGTGAAATTCAAACCATCGTTCTGGATTTCCCCAGATATGAA
AAAATGGTACGGTGGGACGGAAAAGCCTTCCAGAAGATGACAGGCCTCCAGACACTTATT
ATTAGAAGTCTGTGTTTTGCTGAAGGTCCGAAGAATCTTCCAAATAGTTTAAGAGTGCTG
GAGTGGTGGGGATATCCTTCACAGTCTTTGCCTTCTTATTTTTACCCCAAGAAATTAGCT
GTTCTGAAGTTACCGCACAGTTCCTTTATGTCACTGGAGCTGTCCAAGTCAAAGAAGTTC
GTAAATATGACACTTTTGAATTTTGATGAATGTAAAATTATAACACATATACCTGATGTA
TCTGGTGCCCCAAACTTAGAAAGGCTGTCTCTTGATTCTTGTGAGAATTTAGTTGAAATT
CACGACTCTGTTGGATTCTTGGATAAACTTGAAATTCTGAATCTTGGGAGTTGCGCAAAG
CTTCGGAATTTGCCACCCATCCATTTGACCTCTCTCCAACACCTCAATCTTTCACATTGT
TCAAGTCTTGTGAGTTTTCCTGAGATATTAGGAAATATGAAAAATATTACAAGTCTTTCT
TTGGAGTACACTGCCATAAGGGAATTTCCATATTCAATCGGAAATCTTCCCCGACTTAAA
AGTTTAGAACTGCACGGATGTGGAAATCTTCTGTTACCAAGTAGCATTATTCTATTGTCA
GAACTTGAGGAGTTGAGTATTTGGCAATGTGAAGGGTTGAAATCATATAAGCAAGACAAA
GGTCCAGAAAAAGTTGGTTCAACAGTGTCTTCAAACGTGAAGTATATTGAGTTCTTTTCT
TGCAATATATCGGACGACTTCATTCGAATAGGTCTTTCTTGGTTTTCAAATGTGGTAGAA
TTGAACCTTTCAGCAAACACTTTCACAGTTCTTCCAACATGCATCAAAGAATGCCGCTTT
TTGACGATACTTATACTAGATTACTGCAGGCAACTTCGAGAAATCAGAGGAATTCCACCA
AATTTAGAAATATTCTCTGCAATACGATGCACATCCTTGAACGATTTAGACCTCACGAAT
CTTCTTGTGTCCACCAAAGTCTGTTGTCCTTTGAGAGAGCTTGTTTTGGATGACTGTGAA
AGTCTTCAAGAAATTAGAGGGATTCCACCCAGCATAGAACTTTTGTCCGCAAGAAACTGC
AGATCCTTGACTATCTCGTGCAGAAGAATGTTACTGATTCAGGAGTTGCACGAGGCTGGA
AATAAGAGCTTTTGTTTGCCCGGAACACAAATGCCGGATTGGTTTGAGCACCGTAGCAAA
GGACATTCGATTTCTTTCTGGTTTCGTGGCAAGTTCCCTGCACTATCTCTCTGTTTTGTT
GGACTCATGCATAAAATCCCTACCGGGTTCAGACCCATTGTGATCATCAATGGCAATATA
ATGAAAACAATGTTGCCAGCTGAAAAATGGTTTGATTTTGAGTTCCCAGTGTTAACTGAT
CATATATTTATTGTTGGTGAAAGACACATAAAATTTGAAGATAATATGGATGAAGTACTT
TCAGAAAATGAATGGAATCATGCGGTGATTTCTATTGATATTGATTTTAAATGGAGCTCA
AGTGGACTGTTTGCTGCGTGGATTGGACTCCATGTGATCAAACAAAAATGCAGCATGGAC
AGAATTCAATTCACCAATCCTTGCAACTGCTGA

Peptide Sequence

PEP ID

Medtr8g039910.1
PEP Infomation

| disease resistance protein (TIR-NBS-LRR class) | HC | chr8:14829697-14834485 | 20140818
Sequence

MAGSGSYSYVYDVFISFRGEDTRLGFTGFLYKTLSEKGFHTFIDHHADAGRGTTKTLVDA
IEESRIGIVVFSENYASSTWCLDELAYIIDSFSNKKNFRRSVFPVFYNVDPSHVRHQSGI
YGQALDSHQKNNNFNSEKLNKWKNALKQAANLSGFHFKHGDGYEYELIDKIVDLVSTKID
STPYLRVVDHPIGLNYRVLELNWLLNHNTHAATATVGSHGLKLLGIYGMGGIGKTTLARA
VFNFISPQFDAFCFLEDVRENSANHGLVHLQQTLLATLAGQKKKKKDFQLASISEGLLLL
KNMLHRKKVLLVLDDVNSSDQLQATLGRGLDTFGYGTTIIITTRDKHFLTTHGVHTTYKV
EELTKDESLELLSWNAFKTNKIYPDYIDLLNRVTTCASGLPLALEVIGSYLHGKGVKEWE
SALDSYEKIPSKDIQTILKQTYNALDGDLRQLFLDIACFFKGYELSEVEYLLSAHHGYCF
KPHRFRFLLETSLIKIDEHNHVKMHDLIRDMAREIVRQESPDHPGKRSRLWLTTDIVEVL
EKNTGTSEIQTIVLDFPRYEKMVRWDGKAFQKMTGLQTLIIRSLCFAEGPKNLPNSLRVL
EWWGYPSQSLPSYFYPKKLAVLKLPHSSFMSLELSKSKKFVNMTLLNFDECKIITHIPDV
SGAPNLERLSLDSCENLVEIHDSVGFLDKLEILNLGSCAKLRNLPPIHLTSLQHLNLSHC
SSLVSFPEILGNMKNITSLSLEYTAIREFPYSIGNLPRLKSLELHGCGNLLLPSSIILLS
ELEELSIWQCEGLKSYKQDKGPEKVGSTVSSNVKYIEFFSCNISDDFIRIGLSWFSNVVE
LNLSANTFTVLPTCIKECRFLTILILDYCRQLREIRGIPPNLEIFSAIRCTSLNDLDLTN
LLVSTKVCCPLRELVLDDCESLQEIRGIPPSIELLSARNCRSLTISCRRMLLIQELHEAG
NKSFCLPGTQMPDWFEHRSKGHSISFWFRGKFPALSLCFVGLMHKIPTGFRPIVIINGNI
MKTMLPAEKWFDFEFPVLTDHIFIVGERHIKFEDNMDEVLSENEWNHAVISIDIDFKWSS
SGLFAAWIGLHVIKQKCSMDRIQFTNPCNC*

Transcript Sequence

Gene sequence data has not been registered.