Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr8g027985.1
CDS Infomation

| ubiquitin ligase cop1, putative | HC | chr8:10311061-10316451 | 20140818
Sequence

ATGACTGCAAATAGTGGGAGAGGAACTGAAGAGCATAAGAGGAAAATCAATGACCCTTTA
CCAAGGTCACCTAGATTATGCACACCTATTAGGAAGGAAAATGTGATTGGTAATGAGAAT
AATATTTTAACTAGAAATTTTGCTTCCTTAGCTGGATCTGGACCTCCTAGTACTAGTTTT
TGTTCCACCACAGATCCTAAACACATTGTTGAAAAATTACATGTTAGGAATAATAAGAAC
TTGAATGTGGCTTTAGGTATCCCTCCACATAATTTTAGACAGCATCAGAGAAATCAATTA
GCTATTGAGTCTAAGTATAATAATAGCTTGAGTAGAAAAATTGCACAGAAATCACTCAGA
TTAAGCAAAGGACAAAAGGGAATTGATTCTAGAAAGAACTTGAATCATGAACAATATAAG
GCTTTTGCTAATATAGGCAATATGGATAATACACATTTTGTTAGCAGTAAAATGCAAAGT
TCTTCTGCTACATCTAGTTATCCTCAATTGTTAGGAGAGAAAACAGTGAAGGGAAAGGGA
ATTCTTCATAATGTGATGTCTGGCGCAGAATGTTTTAACGATGGACTCAACTTAAGAGCG
TGGATGAAGTCTGAAAGTCATAAAGTGAAGAAATCAGAAAGGCTGTATATATTTAAACAG
ATTTTGGAATTGGTTGATTTTGCACACTCTCAAGGATTTGTCTTGGAAGACATAAAACCA
TCTTGTTTCGTCTTATCGCCTTTGAATAAAATTAAATACATTGGTTCATATAGCCAACAT
GTGTTTGATGACCAAAAATCATGTTTCACCGTATTTAAGTCATGCCTTAAGGCTATCATG
ACCTGCAACGGAACAAGGAAAATGCCTTGGGAACAAGATAACTGTGCTTGCCAAAATTTG
AGTGCAAAGAAGCAAAAGCTATGTGAAGAGAAAACATCTCTTAAGGAGCAGCATCACTTC
AACTGTATTCATGGCTGTGACACAAAAATGGACATGGAAACAAGGGTTAATAAAGAAAGG
TTGTGGCTTGACGATTCGAGTTATCAACATGCTTTTGCAGAAGAAAAACAGTTTATTTCT
GAAACAATTGAGTTTGAAGAGAAATGGTATTCTTGTCCAGAAGTGCTCAATGAGGAAGCT
TGTACATTTTCATCAAATGTTTATAGCCTTGGAGTTCTTCTTTTTGAGTTGCTGTGCAAT
ATTGAGTCATTGGAAGCACATTCAACTGTGATGTTTGATATGCGTCATAGAATCTTACCG
CCAAAATTTCTATCACAAAATGCAAAGGACGCTGGTTTTTGTCTATGGCTTCTGCACCCT
GAACCGTCTTCTCGTCCCAATACCAGGATGATTTTAGAATCTGAATTTATACGCGAATTA
GAGGCATCAAACTCTGGTGATAATAATGTTATAGTATCTGAAGACGATGTAGCTGACACA
CAGGAATTACTGCATTTTCTAATTTCAGTTGAAGAAGAAAAGAAAAAACAGGAAGCTAAA
TTGGCAGAAGAGCTACATTGTTTGAACGAAGATATTAAGGAGGTAGAAGGAAATCATTCG
TATGGAAGTGATTCAGCATTTCCATCGTCACAATTGAACTATCTACCTTATCATGATTCT
TCCAGTAAAATTATTAGTAGATCTTTTCCAAGTTCATTTGTTGATGAAGCAAAATTTATG
AATAACATAAGTCAGCTAGAGAATAGTTACTTCTCCATGAGATTCCAAGGCCCGCTCAAG
GAAGCTGCAGCCGCCAAAAGCAGTGATAAAAGTGTGATGGAAACCAGATGGAGATTGCCT
CATTTAGAGAATGTTGGTAATGGGCCAAAGAGAATTCAAGGTTCTATTGGTTGTCTAGGA
CCTTTCTATGAAGGTATATGCAAATTCGCTCGTTACAGCAAGTTTGAAGAGCGCGGAACA
TTGAGAAACAGTGATCTTCTTAGTTCTGCCAATGTGATATGTGCCTTAAGTTTTGACCGT
GATGAAGACTACATTGCAGCCGGTGGAATTTCAAAGAAAATAAAGATATTTGACCTTAAT
GCTATTTCAAGTGATTCTACAGACATTCAGTACCCCGTTGTCGAGATGTCAAACAAATCA
AAGCTCAGTTGTGTGTGCTGGAACAGTTATATAAAAAACCATCTGGCATCTACTGATTAT
GATGGTGTGGTTCAGATGTGGGATGCAGGCACTGGTCAGCCACTGTCTCAATACATGGAG
CACCAAAAGAGAGCTTGGTCTGTTCACTTTTCGGCGTCCGACCCAAAAATGTTTGCCAGT
GGAAGTGATGACTGTTCTGTCAAACTATGGAATATCAGCGAGAGAAATTCTATAGGAACC
ATAATGAGTCCGGCAAATGTATGTTGTGTTCAGTTCTCTGAATACTCCACAAATCTTTTA
TTTTTTGGATCGGCTGATTACAAGGTGTACGGTTATGATCTTCGTAACACTAAAATTCCT
TGGTGTACGTTACCTGGTCATGGAAAAGCTGTTAGCTATGTAAAATTTATAGATGCACAA
ACAGTTGTGTCTGCTTCCACTGATAACTCTTTGAAGTTATGGGACTTAAAGAAAACTAGT
TCAGCCGAGTTGTCATCTGATGCTTGTGACTTAACCTTTAGAGGTCATAGTAATGGAAAG
AATTTCGTTGGTTTATCTGTTTTGGATGGATACATTGCATGTGGTTCAGAATCTAATGAG
GTTTACTGTTATCACAAATCTCTACCAGTGCCAATGGCTTCTCACAAATTCGAGTCAATC
GATCCCATTTCTGGTCATTCAAACAGTAATGATAACAATGGACAATTTGTTTCTAGTGTC
TGCTGGAGGAAGAAGTCTAACATGCTTGTTGCAGCCAACTCAGTTGGAATTGTGAAACTA
CTTCAGATGGTGTGA

Peptide Sequence

PEP ID

Medtr8g027985.1
PEP Infomation

| ubiquitin ligase cop1, putative | HC | chr8:10311061-10316451 | 20140818
Sequence

MTANSGRGTEEHKRKINDPLPRSPRLCTPIRKENVIGNENNILTRNFASLAGSGPPSTSF
CSTTDPKHIVEKLHVRNNKNLNVALGIPPHNFRQHQRNQLAIESKYNNSLSRKIAQKSLR
LSKGQKGIDSRKNLNHEQYKAFANIGNMDNTHFVSSKMQSSSATSSYPQLLGEKTVKGKG
ILHNVMSGAECFNDGLNLRAWMKSESHKVKKSERLYIFKQILELVDFAHSQGFVLEDIKP
SCFVLSPLNKIKYIGSYSQHVFDDQKSCFTVFKSCLKAIMTCNGTRKMPWEQDNCACQNL
SAKKQKLCEEKTSLKEQHHFNCIHGCDTKMDMETRVNKERLWLDDSSYQHAFAEEKQFIS
ETIEFEEKWYSCPEVLNEEACTFSSNVYSLGVLLFELLCNIESLEAHSTVMFDMRHRILP
PKFLSQNAKDAGFCLWLLHPEPSSRPNTRMILESEFIRELEASNSGDNNVIVSEDDVADT
QELLHFLISVEEEKKKQEAKLAEELHCLNEDIKEVEGNHSYGSDSAFPSSQLNYLPYHDS
SSKIISRSFPSSFVDEAKFMNNISQLENSYFSMRFQGPLKEAAAAKSSDKSVMETRWRLP
HLENVGNGPKRIQGSIGCLGPFYEGICKFARYSKFEERGTLRNSDLLSSANVICALSFDR
DEDYIAAGGISKKIKIFDLNAISSDSTDIQYPVVEMSNKSKLSCVCWNSYIKNHLASTDY
DGVVQMWDAGTGQPLSQYMEHQKRAWSVHFSASDPKMFASGSDDCSVKLWNISERNSIGT
IMSPANVCCVQFSEYSTNLLFFGSADYKVYGYDLRNTKIPWCTLPGHGKAVSYVKFIDAQ
TVVSASTDNSLKLWDLKKTSSAELSSDACDLTFRGHSNGKNFVGLSVLDGYIACGSESNE
VYCYHKSLPVPMASHKFESIDPISGHSNSNDNNGQFVSSVCWRKKSNMLVAANSVGIVKL
LQMV*

Transcript Sequence

Gene sequence data has not been registered.