Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr8g012560.2
CDS Infomation

| vacuolar sorting protein 39 domain protein | HC | chr8:3613282-3627710 | 20140818
Sequence

ATGGCGAAACCCGAATCCACAACCACAACCCGAACCGTAATCGAACCACACTCCCAATTC
GACCTATCAACCCACTCTCGCACCACCACCGTCCGATCCATCGCCATCACCACAATCTCC
AATCGCACCATTCTCTTCATCGGAACTCACTCAGGCACCATCTTCTCTCTCTCCCCTAAC
CAAAACGACACTAATAACCCCCAAAACGACACCGTTTTACCTAACCTCTCCTTTATCCGT
AGCGTTTCCGTAACCCACACTTCAATTGACACCGTTTTAGTTTTATCAGATTTAGGTAAA
GTTTTAATTCTCTCCGATGGTTCCTTGTTTTTAGTTGATTCGGATTTATCGAATGGCGCG
GTTAAATTAGGATTTTCGAAGGGGATTTCGGTTGTAACACGAAGGAAAATGAGAAATAAT
GAATCTGAAAATTTAGGTTTGGGATTAGATACTAATAATAAAAAATTTCTGCAGAAATTG
GGAGGGTTGAACTTAAACTCTAATTTACAGAGTGAGGGTTTTAGTGGATGTGTTTTGGCG
ATTTCGATTGGGAGAAGGTTGATGATTGTGGAGATTGTTTTGAAGGATGTTAATAATGCA
TCACTTGTTGTTTTGAAAGAGATTCAATGTGTTGATGGAGATATTAGTACTATGGTTTGG
ATTGATGATTCGATTATTGTTGGTACTGCAAACGGTTATAGTTTGATTTCGTGTGTTAGT
GGATTAAGTAGTGTTATATTTTCGTTGCCGGATGTGTCGAGGCCGCCGAGGTTGAAGTTG
TTGTATAGGGATTGGAGGGTTTTGTTGTTGGTGGATAATGTGGGAATTATTGTTGATGAG
AAAGGGCAGCCGGTTGGAGGTAGTTTGGTGTTTCGGCGTGGGTTGGATTCGGTCGGGGAG
TTGAGTTTTTATGTGGTTGTTGTGAGTGATGGGAAGGTTGAGTTGTATAATAAGAAAAAT
GGGGGGTGTGTTCAGGTTTTGGCATTTGGTGGGGAAGGGATTGGGCCGTGTGTTGTTGCT
AGCGAGGAAGATAAGGGTGGGAAGCTTGTTGCTGTTGCAACTGCTACCAAGGTTCCTAGG
AATCGGTATTGGGGTTTGCATCCTCCCCCAGCCCCTCTTGAAGATGTAGTCGATGATGGC
TTGATGACAATCCAGAGGGCATCTTTCCTAAGAAAAGCAGGGGTAGAAACAATAGTAGAT
AATGATCATTTTCTCAATCCACCGAATAGAGCTGATTTGTTGGAGTCAGCAATAAAAAAC
ATTAGCAGGTATTTGGAGGCCTGTCGAGAGAAAAAATTAACACAGTCAGTCAGCGAGGGG
GTTGACACTCTATTAATGTATCTCTATAGAGCTCTAAATCGTGTTGAGGACATGGAGAGG
TTGGCATCTTCAACGAACTGGTGTGTTGTGGAGGAGTTGGAACACATGTTAGAAGAGTCG
GGGCATCTACGGACCCTTGCCTTTTTATACGCTAGTAAAGGAATGAGCTCAAAAGCTGTG
TCTATTTGGCGCATCCTGGCAAGAAATTATTCATCTAGCCTACGCAAAGACCCTGCTTTG
GAGACTATTATACAGGATAGTGGGGAAAACCTTATTTCTGGAAAGGCAATTGCAGCAGCT
GAAGCTTCAAAGATTCTTGAGTTGTCATCTGACCAAGATTTGATTCTCCAACATCTAGGA
TGGATTGCTGATATCAGCCAGGTTCTTGCAGTCGAAGTTCTAACATCGGACAAACGAGAG
ATCCAGCTTTCTCCTGATGAAGTTGTTACATCTATTGATCCAAAGAAGGTAGAAATTTTA
CAAAGGTATCTCCAATGGTTGATTGAAGACCAAGACTGCTTTGATACTCAGTTGCATACG
TTGTATGCTCTCTCACTTGCCAAATCAGCAATTGAAGCCTCTGAGTTTGAAAATATCTCT
GAAAGTCTTGCTAGTGGAAATACTGAGAGAAATAATATGACTACTTTGAGGAACTCGATC
TTTCAGACTCCTGTCAGGGAAAGATTACAGTTCTTTTTGCAATCATCAGACTTGTATGAT
CCAGAAGAAGTTCTCGACTTGATTGAAGGATCTGAATTATGGTTGGAAAAGGCTATTTTA
TATAGAAGATTGGGGCAAGAGACTTTGGTCCTCCAAATTCTGGCTTTGAAACTAGAAGAC
AGTGAAGCTGCTGAGCAGTATTGTGCAGAGATTGGAAGATCTGATGCCTACATGCAATTG
CTAGAAATGTATTTGGATCCACAAGATGGTAAGGAGCCCATGTTCACTGCTGCTGTTCGC
CTTCTCCACAATCATGGAGAATCATTGGACCCATTGCAAGTCTTAGAGAAATTATCACCA
GATATGCCGCTTCAACTTGCTTCTGAGACTTTACTACGAATGTTCAGGGCCAGAGTTCAT
CATCATCGTCAAGGACAGATTGTGCATAATTTATCTCGTGCCGTAGACATTGATGCAAGG
TTGTCAAGATTAGATGAAAGGTCAAGGCACATGCAGATTAATGACGAGAGTCTCTGCGAC
TCTTGTAATGCACGCCTCGGTACCAAGTTATTTGCAATGTACCCTGACGATACAGTTGTA
TGTTACAAGTGTTACCGTCGTCAAGGTGAGTCAGTGTCTGTCTCTGGTCGCAATTTTAAG
GAAGACATCATAATTAAACCGGGTTGGCTTGTGAGTCGTTGA

Peptide Sequence

PEP ID

Medtr8g012560.2
PEP Infomation

| vacuolar sorting protein 39 domain protein | HC | chr8:3613282-3627710 | 20140818
Sequence

MAKPESTTTTRTVIEPHSQFDLSTHSRTTTVRSIAITTISNRTILFIGTHSGTIFSLSPN
QNDTNNPQNDTVLPNLSFIRSVSVTHTSIDTVLVLSDLGKVLILSDGSLFLVDSDLSNGA
VKLGFSKGISVVTRRKMRNNESENLGLGLDTNNKKFLQKLGGLNLNSNLQSEGFSGCVLA
ISIGRRLMIVEIVLKDVNNASLVVLKEIQCVDGDISTMVWIDDSIIVGTANGYSLISCVS
GLSSVIFSLPDVSRPPRLKLLYRDWRVLLLVDNVGIIVDEKGQPVGGSLVFRRGLDSVGE
LSFYVVVVSDGKVELYNKKNGGCVQVLAFGGEGIGPCVVASEEDKGGKLVAVATATKVPR
NRYWGLHPPPAPLEDVVDDGLMTIQRASFLRKAGVETIVDNDHFLNPPNRADLLESAIKN
ISRYLEACREKKLTQSVSEGVDTLLMYLYRALNRVEDMERLASSTNWCVVEELEHMLEES
GHLRTLAFLYASKGMSSKAVSIWRILARNYSSSLRKDPALETIIQDSGENLISGKAIAAA
EASKILELSSDQDLILQHLGWIADISQVLAVEVLTSDKREIQLSPDEVVTSIDPKKVEIL
QRYLQWLIEDQDCFDTQLHTLYALSLAKSAIEASEFENISESLASGNTERNNMTTLRNSI
FQTPVRERLQFFLQSSDLYDPEEVLDLIEGSELWLEKAILYRRLGQETLVLQILALKLED
SEAAEQYCAEIGRSDAYMQLLEMYLDPQDGKEPMFTAAVRLLHNHGESLDPLQVLEKLSP
DMPLQLASETLLRMFRARVHHHRQGQIVHNLSRAVDIDARLSRLDERSRHMQINDESLCD
SCNARLGTKLFAMYPDDTVVCYKCYRRQGESVSVSGRNFKEDIIIKPGWLVSR*

Transcript Sequence

Gene sequence data has not been registered.