Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr8g012200.1
CDS Infomation

| disease resistance protein (TIR-NBS-LRR class) | LC | chr8:3411331-3405271 | 20140818
Sequence

ATGTATTCATCTTCATCATCATCTTCCACAAATCCACAATATCTCCATGACGTATTCATC
AACTTCAGAGGCGAAGACGTTCGTCGCACCTTCGTCTCTCATCTCTACGCAGTCCTCTCA
AACGCCGGAATCAACACATTCCTTGACAACGAAAAGCTCGAAAAAGGCGAAGATATCGGA
CACGAACTTCTCCAAGCAATTTCAGTCTCACGCATATCCATAATCGTTTTCTCTAAAAAC
TACACTGAATCGAGTTGGTGTTTAAACGAATTGGAAAAGATCATGGAATGTCGTAGACTT
CACGGTCATGTTGTTTTGCCAGTGTTTTATGATGTTGATCCTTCTGTTGTACGGCATCAG
AAAGGTGATTTTGGTAAAGCTTTGGAAGTTGCCGCGAAAAGTAGGTATATTATTGAGGAA
GTTATGGTGAAGGAATTGGGTAAATGGAGAAAAGTGTTGACGGAAGCTTCGAATTTGTCT
GGTTGGGATGGAAGCGCTTTCAGGAGTGACCGTGAATTAGTGAAAAAAATTGTTGAGGCC
ATTTTGCCAAAACTCGACAACACAACCTTGTCTATAACTGAATTTCCAGTTGGATTAGAA
TCCCATGTAAAGCAAGTGGTTGGGGTGATTGAGAAACATTCGGGCGATGTTTGTATGGTA
GGGATCTGGGGCATGGGAGGATCAGGTAAAACAACTGTAGCCAAAGCCATCTACAATGAA
ATTCATCGTAGATTTGATTGTACTAGTTTCATTGAAAACATTAGAGAAGTTTGTGAAAAG
GATACTAAAGGGCATATACATTTACAACAGCAACTTCTTTCAGATGTCCTCAAAACAAAG
GAGAAAATACATAGTATTGCGTCGGGGACAGCTACGATCCAGAGAGAGCTTACCGGAAAG
AAAGCACTCGTGATACTTGATGATGTGACTGATTTTCAGCAAATAAAAGCCCTATGCGGA
AATCATAAATTTTTTGGTGCTGGAAGTGTGTTAATTGTTACAACCAGAGATGTACACATA
CTTAAGCTACTCAATGTTGACTCTGTCTATAAAATGGAGGAAATGCAGAAAAACGAGTCC
CTTGAACTATTCTCTTGGCATGCTTTTAGAAAAGCTAGTCCTAGAGGAGGCTTTAGTGAA
CTCTCAAGAAATGTGGCTGCTTATTGTGGAGGGTTACCACTGGCTCTTGAAGTCCTTGGA
TCCTACTTATTTGAGAGGACAAAACAAGAATGGATAAGCGTACTATCAAAGTTAGAGAGA
ATTCCCAATGATCAAGTGCACGAGAAGCTGAGAATAAGCTATGATGGTTTAAAGGATGAT
ATGGTAAAGGATATATTTCTTGACATTTGTTGTTTCTTTATTGGTAAGGACAGGGCCTAT
GTTACAGAGATACTAAATGGCTGTGGACTTTATGCTGATATTGGAATAGCGGTCCTCATA
GACCGGAGCCTCCTAAAAGTTGAGAAGAATAACAAGCTTGGAATGCATGATTTAATAAGA
GACATGGGAAGAGAAATTGTCCGTGAAAGTTCAGCAAGAGAACCTGGGAAGCGTAGTCGA
TTGTGGTTTCACGAGGATGTACATGATGTTTTGGCAAAAAATACTGGAACAGAAACTGTT
GAGGCACTGATTTTTAACTTGCAAAGAACAGGCAGAGGTAGCTTTAGTACTAATACTTTC
CAAGATATGAAGAAACTTAGACTTTTACAACTTGATCGTGTTGACCTCACTGGAGATTTT
GGGTATCTTTCCAAACAATTGAGATGGGTCAATTGGCAACGATCTACCTTCAACTTTGTA
CCCAACGACTTTGATCAGGAAAATCTCGTTGCTTTTGAATTAAAATATAGCAATGTTAAA
CAAGTTTGGAAGGAAACCAAGTTGTTGCATAAGCTAAAAATTCTCAATCTCAGTCATTCC
AAGCACTTGAAAAGAACCCCTGACTTTTCAAAATTACCGAATCTAGAAAAACTCATTATG
AAGGATTGTCAAAGTTTATCCGACATACACCCGTCCATTGGAGATCTCAAGAATCTTCTT
CTCATAAATTTGAAGGATTGTGCAAGTCTTGTTAATCTCCCAAGAGAGATCTATCGATTG
AGATCAGTGAAAACTCTCATCCTTTCTGGTTGTTCAAAGATTGTCAAATTGGAAGAAGAT
ATAGTGCAAATGAAATCCTTGACAACTCTAATTGCAGAAAATGCTGGTGTCAAACAAGTG
CCTTTTTCGATTGTTAGATCAAAGAACATCACCCATATATCTCTATGTGGATATCAAGGA
TTATCACGTGATGTTTTTCCTTCTATCATTTGGTCTTGGATGTCACCAACAATGAACTCC
TTAGCACGTATTCCCTCTTTTGGTGGAATTTCAATGTCTCTTGTTTCCTTGAATATTGAT
AGTGATAATCTGGGTTTGGTCTATCAATCACCGATACTTAGCAGCTGTTCAAAACTTAGA
TGTGTTTCGGTACAATGTCACTCAGAGATTCAACTTAAACAAGAATTGAAAGTATTTCTT
AATGATCTTACAGAGTTGGAAATATCACATGCTTCACAAATCTCAGATCTTTCCTTGCAA
TCTCTTTTGATTGGAATGGGAAGTTACCACAAAGTCAACGAGACTCTTGGCAAGAGCTTA
TCGCAGGGATTGGCAACTAATGATTCTCGTGCTTCGTTCCTTCCGGGTAACAATATTCCT
TCTTGGTTAGCCTATACATGTGAGGGACCATCAGTATGTTTTCAAGTGCCCAAGGATAGT
AATTGTGGAATGAAGGGAATAACTTTATGTGTTCTTTATTCATCTACACTTAAAAACATG
GCAACTGAATGTCTCACTAGTGTCTTGATCATTAATTACACAAAATTCACTATTCATATA
TACAAGAGAGACACAGTAATGACCTTTAACGATGAAGATTGGGAAGGTGTAGTATCAAAT
TTAGGAGTTGGTGACAATGTGGAGATTTTTGTAGCTTTTGGGCATGGATTGACTGCTAAG
GAGACCGCTGTCTATCTAATATATGATCAGTCAACTGCAATGGAAATTGAGTCATCAATT
GCTATGGAAGTTGAACCAATACCTGAAGTGCAGGTGCAATCATCACCTGATGTGGTAATG
GAACTATCACCTGGAGTGGAAGCACAACCATCATCTGATGTGGAAACGGAATCACCAATA
GCTGTCAAGAGCGAGCCAATACCAAAGCCAAATGATAAAATCTTTGTAAAACTTGCAAAG
AGAGTGGGAGGATGTTTATGCTTGAACCAGAATTGA

Peptide Sequence

PEP ID

Medtr8g012200.1
PEP Infomation

| disease resistance protein (TIR-NBS-LRR class) | LC | chr8:3411331-3405271 | 20140818
Sequence

MYSSSSSSSTNPQYLHDVFINFRGEDVRRTFVSHLYAVLSNAGINTFLDNEKLEKGEDIG
HELLQAISVSRISIIVFSKNYTESSWCLNELEKIMECRRLHGHVVLPVFYDVDPSVVRHQ
KGDFGKALEVAAKSRYIIEEVMVKELGKWRKVLTEASNLSGWDGSAFRSDRELVKKIVEA
ILPKLDNTTLSITEFPVGLESHVKQVVGVIEKHSGDVCMVGIWGMGGSGKTTVAKAIYNE
IHRRFDCTSFIENIREVCEKDTKGHIHLQQQLLSDVLKTKEKIHSIASGTATIQRELTGK
KALVILDDVTDFQQIKALCGNHKFFGAGSVLIVTTRDVHILKLLNVDSVYKMEEMQKNES
LELFSWHAFRKASPRGGFSELSRNVAAYCGGLPLALEVLGSYLFERTKQEWISVLSKLER
IPNDQVHEKLRISYDGLKDDMVKDIFLDICCFFIGKDRAYVTEILNGCGLYADIGIAVLI
DRSLLKVEKNNKLGMHDLIRDMGREIVRESSAREPGKRSRLWFHEDVHDVLAKNTGTETV
EALIFNLQRTGRGSFSTNTFQDMKKLRLLQLDRVDLTGDFGYLSKQLRWVNWQRSTFNFV
PNDFDQENLVAFELKYSNVKQVWKETKLLHKLKILNLSHSKHLKRTPDFSKLPNLEKLIM
KDCQSLSDIHPSIGDLKNLLLINLKDCASLVNLPREIYRLRSVKTLILSGCSKIVKLEED
IVQMKSLTTLIAENAGVKQVPFSIVRSKNITHISLCGYQGLSRDVFPSIIWSWMSPTMNS
LARIPSFGGISMSLVSLNIDSDNLGLVYQSPILSSCSKLRCVSVQCHSEIQLKQELKVFL
NDLTELEISHASQISDLSLQSLLIGMGSYHKVNETLGKSLSQGLATNDSRASFLPGNNIP
SWLAYTCEGPSVCFQVPKDSNCGMKGITLCVLYSSTLKNMATECLTSVLIINYTKFTIHI
YKRDTVMTFNDEDWEGVVSNLGVGDNVEIFVAFGHGLTAKETAVYLIYDQSTAMEIESSI
AMEVEPIPEVQVQSSPDVVMELSPGVEAQPSSDVETESPIAVKSEPIPKPNDKIFVKLAK
RVGGCLCLNQN*

Transcript Sequence

Gene sequence data has not been registered.