Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr7g103600.1
CDS Infomation

| pentatricopeptide (PPR) repeat protein | HC | chr7:41923424-41925949 | 20140818
Sequence

ATGTTTCTGAGAAGACGCACCTTTCTTCATCTTCTTCCCAATTCAAACTTCAACAATTCC
ATTTCATTCTTCTGTTCCGAATCACTCACACTTCCTCAAAATCAACAACAATGGCTTCAA
AAATTCCAACATATTCAATCCTTAATCGACCAAGATCGCACTCAACACGCCCAAAACCTC
TTCAAATACCTTATTCTCTCCAAAGTTCCTTACTCATTTCCCTCGCAAATTCACTCCCTC
CTATCCAAACCCATCTTTCTAGAAACCCTCTTTCCCTTTTGTTCCAATCCCAATGCCATC
CACAGAGTCATTGAACTCTTCTATTCCATGAAAAACGACGGCTTTATCCTTCCCAATTGT
TTTATCAACCGTCTTCTACAATCCCTTGTTGATTTACGCCACTTTCAAAAGGCCATTACT
CTTTTTAATGATGTTGCTGAATCCGGTGTTCGACCCGATAGTTTTGCTTATGGAAAAGCT
GTTCTTTCTGCTGCTATGTTGAAGGATTTAAATAAGTGTTTTGAGCTGATTAATTTAATG
GAGAAAGATGGAATTCGTCCTACTACTTATGTGTATAATTTAGTGTTGGGTGGGTTGTGT
AAAGCCAAGAAAATAAAGGATGCAAGGAAGGTGTTTGATGAAATGATTCAAAGAAATGTT
GTTCCTAATACTGTGACTTTTAATACGCTTATTGATGGGTATTGTAAGGTGGGTGGAATA
GACGAAGCTTTTAGATTGAGGGCTAGGATGAATGGTCCGTATTCGAAGGCTAATGTTGTT
ACTTACAATTGCTTGTTAAGTGGTCTTTGTGGTTTGGGGAGATTGGAAGATGCTAAGAGG
GTGTTGTTGGAGATGGAAAGGAAAGGTTTTTTGCCTAGGGGGTTTTCGAGTCTTGTATTT
GATGATCAGTTGATGAGTGGAAATGAAAATGGTTTGTTAAATGGAAATGGAACACAGGTC
GATGAGTGGACTTGTAATGCTTTGTTGAATGGACTGTGCAAGGTAGGAAAGGTTGAAAAG
GCCAAAGAGATTTTGGCAAAGCTAGAAAGTAATGGAGTGGTTCCAAGTCCAGTATCATAT
AATATACTGGTGAATGCTTATTGCCAAAAGGGTGACTTGAATAAAGGTATATTGACAGCT
GAAGAAATGGAAAAACGGGGGTTGAAGCCTAGTTATGTCACCTTCAATACCCTGATTAAC
AAGTTTTGTGAAACTGGGGATTTGAACCAGGCAGAGAGATGGGTTAAGAAGATGATAGAG
AAGGGTGTTTCTCCCACTTTGGAGACTTATAACTCTTTGATTAATGGTTATGGAATGACG
TGTGATTTTGTCAGGTGTTTTGAGATTTTTGAGGAAATAGAAAATAAAGGGATGAAGCCT
AATGTCAAAAGCTATGGTTCTCTTATAAACTGTTTGTGCAAAGATGGTAAGCTTCTTGAT
GCTGAGATTGTGCTTGGGGATATGGTAACTCGCGGGGTTTCTCCAAATGCAGATATATAT
AATATGCTCATTGAAGCTAGTTGTTCACTGAGTAAACCGAAAGATGCTTTCAGATTTTTA
AATGAAATGATACAAAATGGAATAGATGCAACTATTGTGACATACAATACTTTAATAAAT
GGAATTGGGAAAAACGGAAGGGTAACAGAAGCTGAGAATCTGTTTCTCCATATGACCAGG
AAGGGATATAAACCAGATGTGATTACATACAATTCCTTAATGTCAGTATACGCAATGTCA
GGAAACCCCGAAAAATGCCTTGAATTGTACGATAATATGAAGAAGCGGGGCATAAAACCT
TCAATTGGGACTTTCCATCCTTTGATCAATTCATGCAGGAAAAAAGGTGTAGTGACAATG
GAGAAAATGTTTCAAGAAATGTTAGGAATGAAATTGATTCCAGATCGAGCTGTATATAAT
GAAATGATTTATGGTTATGCTGAAGATGGAAATGTTCTGAAGGCAATGTCTTTGCACCAA
CAAATGGTTGATCAGGGAATTGATTCCGACAAGGTGACTTACAACTGCTTGATTCTAGCA
CACCTTAGAGATCAAAGGGTCTCAGAAATAAAGCATATTTTAGATGATATGAAGGCAAAG
GGTTTGGTTCCAAAGGCTGATACATATAAAATTCTGGTTAAGGGACATTGTGACTTAAAA
GATTTCAACGGTGCGTATTTTTGGTACAGGGAAATGTTTGATTCTGGTTTCATTTTAAAT
GATTGCATTTGCTCTCAGCTAATATCCGGGCTTAGAGAGGAGGAAATGCTACACGAAGCT
GAAATTGTATCCTCAGAGTTGACTAGTGAACTTCAACAACTTGAAGGCTAA

Peptide Sequence

PEP ID

Medtr7g103600.1
PEP Infomation

| pentatricopeptide (PPR) repeat protein | HC | chr7:41923424-41925949 | 20140818
Sequence

MFLRRRTFLHLLPNSNFNNSISFFCSESLTLPQNQQQWLQKFQHIQSLIDQDRTQHAQNL
FKYLILSKVPYSFPSQIHSLLSKPIFLETLFPFCSNPNAIHRVIELFYSMKNDGFILPNC
FINRLLQSLVDLRHFQKAITLFNDVAESGVRPDSFAYGKAVLSAAMLKDLNKCFELINLM
EKDGIRPTTYVYNLVLGGLCKAKKIKDARKVFDEMIQRNVVPNTVTFNTLIDGYCKVGGI
DEAFRLRARMNGPYSKANVVTYNCLLSGLCGLGRLEDAKRVLLEMERKGFLPRGFSSLVF
DDQLMSGNENGLLNGNGTQVDEWTCNALLNGLCKVGKVEKAKEILAKLESNGVVPSPVSY
NILVNAYCQKGDLNKGILTAEEMEKRGLKPSYVTFNTLINKFCETGDLNQAERWVKKMIE
KGVSPTLETYNSLINGYGMTCDFVRCFEIFEEIENKGMKPNVKSYGSLINCLCKDGKLLD
AEIVLGDMVTRGVSPNADIYNMLIEASCSLSKPKDAFRFLNEMIQNGIDATIVTYNTLIN
GIGKNGRVTEAENLFLHMTRKGYKPDVITYNSLMSVYAMSGNPEKCLELYDNMKKRGIKP
SIGTFHPLINSCRKKGVVTMEKMFQEMLGMKLIPDRAVYNEMIYGYAEDGNVLKAMSLHQ
QMVDQGIDSDKVTYNCLILAHLRDQRVSEIKHILDDMKAKGLVPKADTYKILVKGHCDLK
DFNGAYFWYREMFDSGFILNDCICSQLISGLREEEMLHEAEIVSSELTSELQQLEG*

Transcript Sequence

Gene sequence data has not been registered.