Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr7g045370.1
CDS Infomation

| carotenoid cleavage dioxygenase | HC | chr7:15960760-15955054 | 20140818
Sequence

ATGCAAGCCAAGCCCATTCCCAACCCCTCATCTTACAAAATTCCTCCTCTCATAAGGCCT
CCTCCGGTGCACCAAGCCTCCTTACCCCAAACAATAACCAAACCAAAACCAATATCCACG
CCCATACCGAATACCGATGTTGTAGTACCCGATCGGGTTCTACAACCGGTTCAACCTTTT
ATAGAGCATGATGACCCCGTAGTTGCTTCATGGGACTACAATTTCTTGTTCATGTCACAA
AGATCGGAAACAACTCAACCTATCAAACTACATGTACTTGAAGGTGCAATACCAACCGAT
TTTCCATCCGGTGCATACTATTTAACCGGACCGGGGATTTTCAAGGACGATCATGGTTCC
ACGGTGCACCCGCTAGACGGCCATGGATACCTTAGAGCATTTACTTTCGATAATGCGACT
AATGAAGTCAAATACATGGCTAAGTACATTAAGACCGAAGCTCAAGTCGAGGAGTATGAC
CGAAAGACGGGCTCATGGAGATTTACACATAGAGGTCCATTTTCTGTATTGAAGGGTGGG
AAAAAGATTGGGAATACTAAGGTTATGAAAAATGTTGCTAATACTAGTGTGTTGATGTGG
GGGAAGAAGCTATTGTGTATGTGGGAAGGTGGAAACCCGTATGAGATCGAATCGGGCACG
TTGGATACGATTGGGAAGTTCAACATGGTGGACGGTTGTGATATGGATGACCATAATGTG
AATCACGGTGGTGATGTTTGGGAGGTTGCTGCCACCTTACTAAAGCCTATATTGTATGGA
ATCTTTAAGATGCCACCAAAGAGACTCTTGTCTCACTACAAGGTTGATTCTAGCAGGAGT
AGATTACTTACTGTGTCATGCAATGCAGAAGACATGTTACTTCCACGAAGTAGTTTTACA
TTTACAGAGTATGACAATAATTTCAAGTTGGTAGAGAAGCAAGAGTTCAAAATTCCAGAT
CACTTGATGATCCATGATTGGGCTTTCACGGATACACATTACATAGTATTCGCCAATCGC
ATAAAGCTTGATGTACTAGGATCAATGGGAGCAGTATGTGGGGCATCTCCAATGATATCA
GCATTAACAGTGAACCCAAGTAAGAGTACATCACCAATATACTTACTCCCTAGGTTTCCA
AACAAACCTGAAAGCAAAAAAAGAGATTGGAGAAAACCACTTGAAGTACCTTCACAATTG
TGGTTGCTCCATGTTGGTAATGCCTTTGAAGTTAAACAAGCTCATGGGAATTTGGAAATA
CAAATACAAGCTAGTGCTTGCTCTTACCAATGGTTCAACTTCCGCAAATTATTTGGATAT
AATTGGCAAACACAAAAGCTAGATCCATCAATAATGAATGTCAAAGGTGAAAATGCTTTG
CCACATCTTGTTCAGGTATCTATAAAATTAGATTCAGATTATAATTGCCAAGAATGTGAT
GTGAAGCCCATAAATAAATGGAAGAAATCAGCAGATTTTCCAGCAACCAATCCTTCATTT
TCTGGCAAGCAAAATAAATATCTCTATGCTGCAACCACCTTAGGATCTAGAAAAACATTG
CCAAGTTTTCCTTTTGATACTATAGTGAAATTTGATCTTGTGAATAATTCTGTAAAAGCT
TGGACTGCTGGAAGTAGAAAATTTGTTGGTGAACCTATTTTTGTTCCCAAAGGTGAAGAA
GAAGATGATGGTTACCTTCTTGTTGTTGAGTATGCTACCTCAATGCAAAGATGTTGTCTT
GTTATCTTGAATCCAAAAGAGATAGGAACAAAAAAGGCCCTTGTTGCGAGAATTGAAATT
CCAATGCACTTAAATTTTCCTCTAGGTTTTCATGGTTTATGGGCAGCAACTGAAGGCCAT
ATTTAA

Peptide Sequence

PEP ID

Medtr7g045370.1
PEP Infomation

| carotenoid cleavage dioxygenase | HC | chr7:15960760-15955054 | 20140818
Sequence

MQAKPIPNPSSYKIPPLIRPPPVHQASLPQTITKPKPISTPIPNTDVVVPDRVLQPVQPF
IEHDDPVVASWDYNFLFMSQRSETTQPIKLHVLEGAIPTDFPSGAYYLTGPGIFKDDHGS
TVHPLDGHGYLRAFTFDNATNEVKYMAKYIKTEAQVEEYDRKTGSWRFTHRGPFSVLKGG
KKIGNTKVMKNVANTSVLMWGKKLLCMWEGGNPYEIESGTLDTIGKFNMVDGCDMDDHNV
NHGGDVWEVAATLLKPILYGIFKMPPKRLLSHYKVDSSRSRLLTVSCNAEDMLLPRSSFT
FTEYDNNFKLVEKQEFKIPDHLMIHDWAFTDTHYIVFANRIKLDVLGSMGAVCGASPMIS
ALTVNPSKSTSPIYLLPRFPNKPESKKRDWRKPLEVPSQLWLLHVGNAFEVKQAHGNLEI
QIQASACSYQWFNFRKLFGYNWQTQKLDPSIMNVKGENALPHLVQVSIKLDSDYNCQECD
VKPINKWKKSADFPATNPSFSGKQNKYLYAATTLGSRKTLPSFPFDTIVKFDLVNNSVKA
WTAGSRKFVGEPIFVPKGEEEDDGYLLVVEYATSMQRCCLVILNPKEIGTKKALVARIEI
PMHLNFPLGFHGLWAATEGHI*

Transcript Sequence

Gene sequence data has not been registered.