Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr6g478080.1
CDS Infomation

| disease resistance protein (TIR-NBS-LRR class) | LC | chr6:28899364-28906820 | 20140818
Sequence

ATGGCTGGATCACCATCCTCATCATCCATCACGAATGATGGCTACGAATACGATGTTTTC
CTCAGCTTTAGAGGCTTTGAAACACGTCGTGATTTTACAGGAAATATTTGGAATGCTTTG
CATAATAGGGGGATCCGCACCTTCAGGGACGACTTGGAGATTTACAAAGGGAACAATATC
GAAAAATCACTTTACGAAGCTATTGAAAAATCAAAGGCGGCCATAATTGTTCTCTCTCCG
AGTTATGCAACTTCGTCCTTTTGTTTAGACGAACTTTGTCATATCCTTAAATGCATACAT
GGAAGGGGACGATTTGTTTGGCCAATCTTTTATGACGTTGACCCTTCAATTGTGAGATGG
TCAGAAGAAGGAACGTATGGAGAAGCAATGGCTGAACATAAAGCGAGCAATTGGTATAGC
GAAGATAAGTTGCAGGAATGGAAGAATGCTTTGAATCAATTGGCTAATTTCTCTGGTACC
GTTTACAAATGGAAGACAGGAGACGTCTCAAGAGTGATCCAACCTTTTTCCTTATCTATT
CCTGATTACATAGTTGGGTTGGAGGACCAAATACAAGATGTATTACGGCTTTTGAATGTT
GGGTCTGTTGATAAAGTCTATATGGTCGGAATCCACGGAACTGGTGGAATAGGGAAAACA
ACTCTTTCTCTTGCAGTTTATAATTCAATTGTCGATCAATTTGATGGTTCTTGTTATCTT
GAAGATGTAAGAGGAAATAAAGAGAAACATGGGTTGATACATCTCCAAAATATCCTTCTT
TCTAAAATATTTGGAGAAAATAAAATTGCGGTAACAAGCGTTAACGAGGGAATTAAAGAA
CTTCGAGTTAGGCTCAAACAGAAGAAGGTTCTTTTGCTTCTTGACAATGTTGACAAGTTG
GATCAATTACGCGCTATTGTTGGAGAACCCGAATGGTTTGGTAATGGAAGTAGAGTTATC
ATCACGACCCGTGACACACAAGTGCTAAAAAGTCATGGGGTTGAAAAAACACATGAAGTG
AAACTGTTGTTGAGGGATGAAGCTTACGATTTTCTTAGATGGAAAACTTTTGGAACTAAC
GAAGTTAGTCCAAGCTTTGAAGATGTTTTCAATCGTGCTTTAAACTATACAAGTCGCCTT
CCATTAGCTATTGAAATAATCGGTTCTCACTTATTTTCAAAAAAAACAACAGAACAATGG
ATATCTGCGCTAGATCGGTACGAAAAGATTCCTAAGCAAGAGATCTTTGAGATTCTTAAA
GTGAGCTTCGATGATTTGGTCCAAGAAGAGAAAGATGTTTTTCTTGACATAGCTTGTTTT
TTCAAAGGAGAACAATTGGAAGATGTCGAAATAATACTTCATGCTCATTATGGTGACGAA
AAGAAAGATCACATCAATGTGTTAATTGAAAAATCTCTCATAAAGATAAGCCAGCCTAAT
TTTTTGACATTACATGATCTGATAGAAGATATGGGAAAAGAAATTGTCAGACTAGAATCA
CCAGATCAGCCTGGAGAACGCAGTAGATTATGGTCTGCTAAAGACATAGCTGAAGTTTTA
GAAGAAAATACGGGAACAAGTAAAATTGGAATGATGATGTGTTCGGATTCCGATGAAGAC
ATTGTAGTAAATTGGGATGGAGAGGCATTTAAGAATATGACAAAGCTTAGAACACTTTTT
ATTCAAAGTGTTTATTTTTCTGAAAGTCCAAAGCATCTTCCAAATAGTTTAAGAGTACTG
CGCTTGTGGGAATATCCATCAGAAGAGTGTTTACCGGTTGATTTTTACCCGAGGCAACTC
ACATTATGCAAATTGAACTTTACATTTAATCGTCCACAGGAAGTCTTTTTCAAGAAGGCA
AGTTACTTTAAGAATATGAGGATGTTACAGTTTCACTTTTGTGATTCTTTGAGATCGATA
CCTGATGTGTCAGGTCTCCAAAATTTAGAAGATTTTTCATGTTTGAGGTGTAATGATTTA
ATTACATTTGATGACTCCATTGGGTTGCTCGGTAAGCTTAAAATTTTGAGTGTCGTCAGT
TGTCCAAAGATCGAAACTATTCCACCTCTCAAGTTAGTTTCATTGGAGGAACTCTATCTT
TCAGAATTACATAGCATTATGAGTCTTTCTCCCATGTTGGACGAGTCATTGGATAAACTT
AAAATTTTGAAGGTCAACTGCTGTCGTTCTATCAATTATATTCCACCTCTCAAATTACCT
TCATTGGAGGAACTATATCTTTCAATATTATGGGGCATTAAGAGTCTTTCTCCCATGTTG
GATGAGTCATTGAATAAACTTAAAATTTTGAAGGTTGACAACTGTATACATCTCATGTAT
ATTCCACCTCTCAAATTACCTTCATTGGAGGAACTCAATCTTAAAGCTTTATTCAATATT
GAGAGTCTTTCTCCCATGTTGAATGAGTCATTGGATAAACTTAAAATTTTGAAGGTCTTA
GGTTGTCGTCATCTCAAATATATTCCACCTCTCAAATTACCTTCATTGGAGGAACTCAAT
CTTCAAGGTTTATCCCGTATTGAGAGTCTTTCTCCCATGTTGAATGAGACATTGGATAAA
CTTAAAATTTTGACGGTCTTGGGTTGTCGTTGTCTCAAATATATTCCACCTCTCAAATTA
CCTTCATTGGAGGAACTCTATCTTATAGAATTATGGAGCATTAAGAGCCTTCCTCCCATG
TTGGATGAGTCATTGGATAAACTTAAAATTTTGAGGTTCATTTATTGTCAAGAGATCGAA
ACGGTTCCACCTCTCAAATTAGCTTCATTGGAGGAACTATATCTTTCAGGATTAAATAGC
ATTAAGAGTCTTTCTCCCATGTTGGATGAGACATTGAATAAACTTAAAATTTTGAGTGTC
TTCGGTTGTCGAAAGATCGAAACTATTCCACCTCTCAAATATGATTCATTAGAGGAACTC
TATCTTTCAGATTTAGATAGCATTAAGAGTCTTTCTCCCATGTTGGATGAGTCATTGGAT
AAACTTAAAATTTTGCGTGTCCTCGATTGCCCAAAGATCGAAACTATTCCATCTCTCAAA
TTAGCTTCATTGGAGGAACTCTGTCTTTCAGAATTACATAGCATTAAGAGTCTTTCTCCC
ATGCTGGATGAGTCATTGGATAAGCTGAAAGTCTTGAATATTCAAGGTTGCTATGAGCTG
TGGAGTTTTCCACGTGTCATGTTGCCTTCATTGGAAGAACTCGATCTTTCATATTGTGAA
TATCTGGAGACTTTTCCACCTATGGTGAGTGGGTCAATGGCTAAACTTAAAATATTGAGA
CTTAAAGATTGTAAAAAGCTCAGGAAAATTCCAGCTATCAACGTGGATTCCCTAGATGAA
TTCGATCATTCAGGATGTGAGAGTCTCGAGTTTTCCACCTCTGACTGA

Peptide Sequence

PEP ID

Medtr6g478080.1
PEP Infomation

| disease resistance protein (TIR-NBS-LRR class) | LC | chr6:28899364-28906820 | 20140818
Sequence

MAGSPSSSSITNDGYEYDVFLSFRGFETRRDFTGNIWNALHNRGIRTFRDDLEIYKGNNI
EKSLYEAIEKSKAAIIVLSPSYATSSFCLDELCHILKCIHGRGRFVWPIFYDVDPSIVRW
SEEGTYGEAMAEHKASNWYSEDKLQEWKNALNQLANFSGTVYKWKTGDVSRVIQPFSLSI
PDYIVGLEDQIQDVLRLLNVGSVDKVYMVGIHGTGGIGKTTLSLAVYNSIVDQFDGSCYL
EDVRGNKEKHGLIHLQNILLSKIFGENKIAVTSVNEGIKELRVRLKQKKVLLLLDNVDKL
DQLRAIVGEPEWFGNGSRVIITTRDTQVLKSHGVEKTHEVKLLLRDEAYDFLRWKTFGTN
EVSPSFEDVFNRALNYTSRLPLAIEIIGSHLFSKKTTEQWISALDRYEKIPKQEIFEILK
VSFDDLVQEEKDVFLDIACFFKGEQLEDVEIILHAHYGDEKKDHINVLIEKSLIKISQPN
FLTLHDLIEDMGKEIVRLESPDQPGERSRLWSAKDIAEVLEENTGTSKIGMMMCSDSDED
IVVNWDGEAFKNMTKLRTLFIQSVYFSESPKHLPNSLRVLRLWEYPSEECLPVDFYPRQL
TLCKLNFTFNRPQEVFFKKASYFKNMRMLQFHFCDSLRSIPDVSGLQNLEDFSCLRCNDL
ITFDDSIGLLGKLKILSVVSCPKIETIPPLKLVSLEELYLSELHSIMSLSPMLDESLDKL
KILKVNCCRSINYIPPLKLPSLEELYLSILWGIKSLSPMLDESLNKLKILKVDNCIHLMY
IPPLKLPSLEELNLKALFNIESLSPMLNESLDKLKILKVLGCRHLKYIPPLKLPSLEELN
LQGLSRIESLSPMLNETLDKLKILTVLGCRCLKYIPPLKLPSLEELYLIELWSIKSLPPM
LDESLDKLKILRFIYCQEIETVPPLKLASLEELYLSGLNSIKSLSPMLDETLNKLKILSV
FGCRKIETIPPLKYDSLEELYLSDLDSIKSLSPMLDESLDKLKILRVLDCPKIETIPSLK
LASLEELCLSELHSIKSLSPMLDESLDKLKVLNIQGCYELWSFPRVMLPSLEELDLSYCE
YLETFPPMVSGSMAKLKILRLKDCKKLRKIPAINVDSLDEFDHSGCESLEFSTSD*

Transcript Sequence

Gene sequence data has not been registered.