Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr6g012850.1
CDS Infomation

| pentatricopeptide (PPR) repeat protein | HC | chr6:3995998-3993764 | 20140818
Sequence

ATGACATGGTCACATTCAAAGACAACACTTTCACAAACCACTACCTTATCATCACTCGCT
CTTCATTTCCGCTCTCTCCTCCGACAATGCTCACGCGCCACCGCTCTCCGCCCCGGACAA
CAACTCCACGCCACCGCAATCGTCACTGGCCTCATCTCTTCCCCAAACCACTTCCTCCGT
AACGCCCTTCTCCATCTCTACGGTTCATGCTCCCTTCCTTCCCACGCACGTAAACTGTTC
GATGAAATTCCTCAGTCACACAAAGACTCTGTAGATTACACCGCCCTCATTCGTCATTGT
CCACCATTTGAATCCCTCAAATTGTTCATCCAAATGCGACAATTTGATCTTCCTCTTGAT
GGGGTTGTCATGGTTTGTGCACTCAATGCTTGTGCAAGACTTGGTGGAGGAGACACTAAA
GTTGGGTCTCAAATGCATGTGGGTGTTGTGAAATTTGGATTTGTGAAGTTTGATAAAGTT
TGTAATGCTTTGATGAATGTGTATGTTAAATTTGGGCTTGTGGGTGAGGCTAGAAAAATG
TTTGAAGGGATTGAAGTTCGTAGTGTTGTGTCTTGGAGTTGTTTTTTGGAAGGTTTGGTG
AAATGGGAGAGTGTGGAGAGTGGGAGAGTGTTGTTTGATGAAATGCCGGAGAGGAACGAG
GTTGCTTGGACTGTTATGATTGTTGGTTATGTTGGGAATGGGTTTACAAAGGAAGCGTTT
TTGCTTTTGAAAGAAATGGTTTTTGGGTGTGGGTTTAGGTTGAGTTTTGTTACGTTGTGT
TCTGTTTTGTCGGCTTGTTCTCAATCTGGTGATGTTTGTGTAGGTAGATGGGTTCATTGT
TATGCTGTTAAGGAAATGGGGTTGGATTTTGGTGTTATGGTTGGGACTAGTTTGGTTGAT
ATGTATGCAAAATGTGGTAGGATAAATGCTGCATTGTCGGTGTTTAGGAGCATGCTAAAG
AGGAATGTGGTGGCTTGGAATGCTATGCTTGGTGGATTAGCAATGCATGGGATGGGGAAA
ATTGCGGTGGATATGTTTCCTTCTATGGTGGAAGAAGTGAAACCCGATGGTGTTACTTTT
ATGGCTTTGTTAAGTGCTTGCAGCCATTCGGGTCTAGTTGAAAAGGGTTGGGATTATTTT
CATGATCTCGAGCCTGTTTATAGGATTAAGCCAGAAATAGAGCATTATGCTTGCATGGTG
GGTCTTCTCGGTCGAGCCGGACGATTGGAAGAAGCTGAGATTATGGTAAAGAATATGCGT
ATTCCTCCAAATGAAGTTGTTTTGGGGTCACTTATTGGTTCTTGTTATGCACATGGTAGG
TTGCAGTTAGGTGAAAAGATTATGAGAGATTTGCTTGAGATGGATCCACTTAACACCGAG
TATCATATCGTGCTTTCGAACATGTATGCATTGTCTGGAAAAGTAGAAAAGGCGAATTCG
CTTAGGCAGGTTCTTAAGAAAAGGGGTATCAAAAAAGTGCCAGGAATGAGTTCAATATAT
GTTGATGGAAAACTTCATCAGTTTATTGCAGGGGATAAATCACACACAAGAACTTCGGAG
ATTTACATGAAGCTAGATGAGATGATTTGTAGATTGAGGTCGGCGGGTTATGTTCCTAAT
ACAAGTTGTCAAGTTTTGTTTGGTTGTTCAAATAGGGATGATTGCAGTGAATCATTGGAG
GAGGTAGAACAAGTGTTGTTCACTCATAGTGAGAAGCTGGCACTGTGTTTTGGACTAATG
AGCACACCATCTGGTTCCCCTTTGCATATTTTCAAGAACTTGAGGATATGTCAAGACTGT
CATTCTGCTATTAAGATTGCCTCTAAAGTATACAAACGCGAAATTGTTGTCCGAGATCGT
TATCGTTTTCATAGTTTCAAGCATGGCTCTTGTTCTTGCTCTGATTATTGGTGA

Peptide Sequence

PEP ID

Medtr6g012850.1
PEP Infomation

| pentatricopeptide (PPR) repeat protein | HC | chr6:3995998-3993764 | 20140818
Sequence

MTWSHSKTTLSQTTTLSSLALHFRSLLRQCSRATALRPGQQLHATAIVTGLISSPNHFLR
NALLHLYGSCSLPSHARKLFDEIPQSHKDSVDYTALIRHCPPFESLKLFIQMRQFDLPLD
GVVMVCALNACARLGGGDTKVGSQMHVGVVKFGFVKFDKVCNALMNVYVKFGLVGEARKM
FEGIEVRSVVSWSCFLEGLVKWESVESGRVLFDEMPERNEVAWTVMIVGYVGNGFTKEAF
LLLKEMVFGCGFRLSFVTLCSVLSACSQSGDVCVGRWVHCYAVKEMGLDFGVMVGTSLVD
MYAKCGRINAALSVFRSMLKRNVVAWNAMLGGLAMHGMGKIAVDMFPSMVEEVKPDGVTF
MALLSACSHSGLVEKGWDYFHDLEPVYRIKPEIEHYACMVGLLGRAGRLEEAEIMVKNMR
IPPNEVVLGSLIGSCYAHGRLQLGEKIMRDLLEMDPLNTEYHIVLSNMYALSGKVEKANS
LRQVLKKRGIKKVPGMSSIYVDGKLHQFIAGDKSHTRTSEIYMKLDEMICRLRSAGYVPN
TSCQVLFGCSNRDDCSESLEEVEQVLFTHSEKLALCFGLMSTPSGSPLHIFKNLRICQDC
HSAIKIASKVYKREIVVRDRYRFHSFKHGSCSCSDYW*

Transcript Sequence

Gene sequence data has not been registered.