Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr5g095690.1
CDS Infomation

| pentatricopeptide (PPR) repeat protein | HC | chr5:41831683-41828172 | 20140818
Sequence

ATGATTAGCAGGACAATAGTTCGTGACAGTACAAAACTGTCACAACTACTTCATCAATGT
CGCAATATCCATCACCAACAATGTCTTTCTGCTTTAGATTCACATTCCTACGCCCACATG
CTCCAACAAATTATTCGAAACGGCGCCGACCCGATCGCAGGAAAACATCTCCACTGCCAC
ATTCTCAAGCGTGGCACTTCTCTTGACTTGTTTGCTCAAAACATTCTTCTTAACTTTTAC
GTTCAATCCAATTCCTTGCAAGATGCTTCCAAGCTGTTTGATGAAATGCCCCAAACAAAT
ACCATCTCTTTTGTTACCTTAGCTCAAGGTTACTCCCGCGACCATCAATTCCATCAAGCC
CTTCACTTCATTCTCAGGATATTCAAAGAAGGACATGAAGTGAACCCTTTTGTTTTTACT
ACTCTTCTCAAGCTGCTGGTGAGCATGGATTTGGCTCACTTGTGTTGGACTCTTCATGCT
TGTGTTTATAAGCTTGGGCATCATGCTGATGCATTTGTTGGGACTGCCCTTATTGATGCT
TATTCTGTTCGTGGAAATGTCGATGTTGCTCGCCATGTTTTCGATGACATTTGTTGCAAG
GACATGGTGTCTTGGACTGGGATGGTAGCTTGTTATGCTGAGAATTGTTTCTATGAGGAG
TCATTGCAACTTTTCAACCAGATGAGGATTATGGGGTACAAGCCCAATAATTTCACCATT
TCAGGTGCACTTAAGTCCTGTCTTGGTCTCGAGGCGTTTAATGTTGGGAAAAGTGTTCAT
GGTTGTGCTTTGAAAGGTTGTTATGATCATGATCTGTTTGTTGGCATTGCATTGCTTGAG
TTATATGCGAAGTCTGGGGAGATTATTGATGCACAACGGCTTTTTGAGGAAATGCCAAAA
ACTGATCTTATTCCTTGGAGTCTGATGATAGCGCGGTACGCTCAGAGTGACAGAAGTAAA
GAGGCTTTGGATTTGTTTCTTCGAATGAGGCAAACATCTGTTGTCCCTAATAATTTTACA
TTTGCTAGTGTGCTGCAAGCTTGTGCCTCTTCAGTTTCGCTGGATTTAGGAAAGCAGATT
CATTCTTGTGTGCTGAAATTTGGGTTGAACTCAAATGTCTTTGTGTCGAATGCCATCATG
GATGTTTATGCCAAGTGTGGTGAAATTGAGAACTCCATGAAATTGTTTGAGGAATTGCCA
GATCGGAATGATGTGACTTGGAACACTATAATCGTTGGTTATGTTCAGTTAGGGGATGGG
GAGAGAGCAATGAATTTATTTACACATATGCTTGAACATGACATGCAGCCAACTGAAGTG
ACATATTCAAGTGTTCTCCGTGCCTCTGCTAGTTTAGCGGCACTAGAACCAGGGCTTCAG
ATTCATTCCTTAACCATCAAAACTATGTATAACAAGGACACTGTAGTTGCAAATTCTTTG
ATAGATATGTACGCTAAATGTGGAAGAATCAATGATGCCCGACTGACATTTGATAAGATG
AACAAAAGGGATGAGGTTTCATGGAATGCTATGATCTGTGGATATTCTATGCATGGCATG
AGTATGGAGGCTCTAAATTTATTTGACATGATGCAACATACCGATTGCAAACCTAATAAA
CTGACTTTTGTTGGTGTCCTGTCTGCGTGTAGCAATGCAGGATTATTATACAAAGGACAA
GCTCACTTTGAATCAATGTCAAAGGATTACGACATTAAGCCATGTATAGAACACTATACT
TGCATGGTTTGGCTTCTTGGACGATTGGGCCGTTTTGATGAAGCAATGAAACTCATTGGA
GAAATTGCATATCAGCCTAGTGTTATGGTGTGGCGTGCATTGCTTGGTGCGTGTGTTATT
CACAAGAAAGTTGATCTAGGAAGGGTTTGTGCCCAACATGTACTTGAGATGGAGCCACAT
GATGATGCAACCCATGTACTACTGTCAAACATGTACGCCACTGCAGGGAGATGGGACAAT
GTTGCTTTTGTTAGAAAATATATGCAAAAGAAAAAAGTTAGGAAAGAACCTGGCTTAAGC
TGGGTTGAGAACCAAGGTGTTGTTCACTATTTTTCTGTGGGTGACACTTCTCATCCTGAC
ATTAAACTAATATGTGCAATGCTTGAATGGTTAAACAAGAAAACCAGGGATGCAGGGTAT
GTTCCTGATTGCAATGCTGTTTTGCTTGATGTACAGGATGATGAAAAAGAGCGACACTTG
TGGGTACATAGTGAAAGACTAGCATTGGCTTATGGACTAATTCGGACTCCGCTATCATGT
TCTATTCGCATTATTAAAAATCTTCGTATATGTATAGATTGTCATACTGTTATGAAGCTG
ATCTCGAAAGTTGTGCAGCGAGAAATTGTTATCAGAGATATAAATCGGTTTCATCATTTT
CGTCATGGGGTGTGCTCATGTGGTGATTACTGGTAA

Peptide Sequence

PEP ID

Medtr5g095690.1
PEP Infomation

| pentatricopeptide (PPR) repeat protein | HC | chr5:41831683-41828172 | 20140818
Sequence

MISRTIVRDSTKLSQLLHQCRNIHHQQCLSALDSHSYAHMLQQIIRNGADPIAGKHLHCH
ILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQA
LHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDA
YSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTI
SGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPK
TDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQI
HSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDG
ERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSL
IDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNK
LTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIG
EIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDN
VAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLICAMLEWLNKKTRDAGY
VPDCNAVLLDVQDDEKERHLWVHSERLALAYGLIRTPLSCSIRIIKNLRICIDCHTVMKL
ISKVVQREIVIRDINRFHHFRHGVCSCGDYW*

Transcript Sequence

Gene sequence data has not been registered.