Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr5g088490.1
CDS Infomation

| PPR containing plant-like protein | LC | chr5:38409043-38411682 | 20140818
Sequence

ATGCTACAATTGAAACATGTTATATCCAAAGTCAAACTCAAAACCCTTTTTCCTTACACA
AGCATTTTCACAAACACTTGGAACGCATCTTCATATTCATCATCTTCTTCATCTCTTTCT
CCATTACCCAAATCTTCATTCCCCATTACCCAAAACGACGTCGCTTCCACCTTCAAAACC
TGGTTCCAAAACCATCACCTTTACCACGATCCTCTCCTTCTCCGAATCTACCAAATCCTC
TCTTCCAACGACAATTTCTCCGCTTCTCTCACCTCCCTCAACCTCCCCATCACCACATCC
TTCGTCCTCCGTGTCCTTCATTACGGCGCCGACAACAACTACATTCTTCCATGTCTCAGA
TTCTTCGATTGGGTTGGTCATCAGCCTGGTTTTTACCATACACAAGCTACATTCACTGCG
ATTTTTCGTATCCTTGCACGTGCGAAGCTAATGCCGATCGTTATTGAGTTTCTTGAAACG
TTTGGGAAGCGTGTTTTTGATCATAAAGTTTGTTTTATTGATTTGCTTGTTGTTGGTTAT
GCAATTGCTGGTAAACCTGAAATTGCACTCAATGTGTTTGGTAAAATGCGTTTTCAAGGT
CTTGATTTGGATATAGTTGGTTATCATATTTTACTTGGTGCTCTTGCTAAGGATAATTAT
TTTAATTCTTTTGATGTGATTCTTAATCAGATTCGGAGTAAAGGGTATGCAACACGTGCT
ACTGATACTATTGTTGTTAAGTTTCTGTGTAACCAGGGTAGATTGGATGAGGCGGAAAAT
TATCTTATCGGTTTGTTGGATAGTGGGAAAAAGTTGCATGGTTCTGAGGTAGGTTTTCTT
GTTGTTTCGTTGTGTGAGAGGAAAAAGGTTGAGCATGCTGTTGAGTTGGTTAAGGAGTTT
AGGAACTCGGGGTTGAATCTGTTTGAACATGCTTATGGTGATTGTATAAAGGGTCTTGTG
AAGGGTGGTAGGTTTGATGAGGCTTTGGAGTTTTTTAGGCAGAAGAGAGAATCTGAAGGG
TATGTTCCTCGTTGGTATAGGTATAACATGTTGATTTGTAGGCTTTTGAGGGAGAGTAGG
CTTCAGGAGGTATATGATTTGTTGATGGATATGAAGGAGTCTTGTATTCCACCTGATATG
GTTACTATGAGTGTTGTCTTGTGCTTCCTTTGCAAAGCTGGGATGGTGAATGCCGCGCTC
CAATTGTACGAATCCAGGTCTCAGTTTGGACTGAATCCGAATAACTTGGCTTACAAGTAT
TTGATACTTAATCTGTGTTGGGATGGGAGTGTTAAGGAGGCGTACAGTGTTTTGAAAACT
TTTATCGGAAATGGTCTTTTTCCTGATACACAAACCTTTACCACACTTGCCAATGCTTTG
TGCAGAGAGTGCAAGGTTGATGAGATGAAGGAGCTGATGCATCTTGCCTGGGAGCGAAAC
TTTACACCAAGCCATATCACATATGACAAGTTTATATCGGCTTTGTGCCAAGCTGGAAGA
CTAGAAGATAGTTATTTGGTGCACGGGGATCACAACAATGCAACTGCTAGACTGTCCTAT
GGTAGGATGGTTAAGAGTTTTATTAAGTTTAAGAGGGGAGACATTGCTGCTCGCCTTCTG
GTTAAAATGAAAGAGAAGAATTTTGAATTGACGCGGATCTGGTGCACGGCTGTTATTGGA
AGTTTACTTGATATGGAAAATCCAAAATCACGTGTTTTCAATTTATTGGACATGCTGACT
CATGGTAAACCTGATGCTAAGATTTTCAACTTTTTCATTGATGGAGCTGTGCATGCCAAT
AATACAGAGTTGTCCAGGGAAGTATATGAGTTGATGCTAAGGAATAACATTGTGCCCAGT
AGTTCATCTCAACGTCTTGTGTTGATTGGTTATTTGAAAAGTGGAAAGATATCTGATGCT
TTGAATTTCTTTCACAGTCTTCGGCGCCAGGGCACAGTGAGCAAAAAAGTATATCAATCC
ATTATTTTTGCTCTCTGCAAATCCTGTAAGGCTGACATTGCACATGATTTCTTGTTTCAA
ATGTTTAAAGCTGGATTAAATCCAAGCATTGAATGCTTTGAGATTCTTGTGCAGACGCTT
TGCTCATTGGAAAGATACCATGAAGCGATAAATCTTGTTCATGTGTATATAAAAATGGGA
CGTCGATTAACTAATTTTCTTGGCAACATACTTCTTTCTCATTCATTGATATCGCCGGAT
ATCTATCATGCATGTGTTCGTTTAAGAGGAGCCAAAGAGGAAGAATGTTCTCCTATGTCT
ACACTGAGCTTTATCATTGGTGCATTTTCTCGTTGTCTTAGAGTAAATCCTTCTGTTGAG
GAATTGGAGAAACTAATATCAACGTGCTTTCCGCTTGACTTTTACACCTACAATCAGCTG
CTGAGAAGAGTAACCCAATATGATATGAACCAAGCTTGTGAGTTGTTTAATAGGATACGT
CAAAGGGGTTATGAGCCTAATGATTGGACTTATAATATCATGGTAAGTGGTTTCTCAAAT
CATGGGAGAAATGATGAGGCTAAGCAGTGGGTTGAAGAAATGCACCAAAAAGGATTTTAT
CCAAGAGAGAATACTAAAAGAAATGTACAAAAAGGAATTTTATCCAACAGAGAATACTAG

Peptide Sequence

PEP ID

Medtr5g088490.1
PEP Infomation

| PPR containing plant-like protein | LC | chr5:38409043-38411682 | 20140818
Sequence

MLQLKHVISKVKLKTLFPYTSIFTNTWNASSYSSSSSSLSPLPKSSFPITQNDVASTFKT
WFQNHHLYHDPLLLRIYQILSSNDNFSASLTSLNLPITTSFVLRVLHYGADNNYILPCLR
FFDWVGHQPGFYHTQATFTAIFRILARAKLMPIVIEFLETFGKRVFDHKVCFIDLLVVGY
AIAGKPEIALNVFGKMRFQGLDLDIVGYHILLGALAKDNYFNSFDVILNQIRSKGYATRA
TDTIVVKFLCNQGRLDEAENYLIGLLDSGKKLHGSEVGFLVVSLCERKKVEHAVELVKEF
RNSGLNLFEHAYGDCIKGLVKGGRFDEALEFFRQKRESEGYVPRWYRYNMLICRLLRESR
LQEVYDLLMDMKESCIPPDMVTMSVVLCFLCKAGMVNAALQLYESRSQFGLNPNNLAYKY
LILNLCWDGSVKEAYSVLKTFIGNGLFPDTQTFTTLANALCRECKVDEMKELMHLAWERN
FTPSHITYDKFISALCQAGRLEDSYLVHGDHNNATARLSYGRMVKSFIKFKRGDIAARLL
VKMKEKNFELTRIWCTAVIGSLLDMENPKSRVFNLLDMLTHGKPDAKIFNFFIDGAVHAN
NTELSREVYELMLRNNIVPSSSSQRLVLIGYLKSGKISDALNFFHSLRRQGTVSKKVYQS
IIFALCKSCKADIAHDFLFQMFKAGLNPSIECFEILVQTLCSLERYHEAINLVHVYIKMG
RRLTNFLGNILLSHSLISPDIYHACVRLRGAKEEECSPMSTLSFIIGAFSRCLRVNPSVE
ELEKLISTCFPLDFYTYNQLLRRVTQYDMNQACELFNRIRQRGYEPNDWTYNIMVSGFSN
HGRNDEAKQWVEEMHQKGFYPRENTKRNVQKGILSNREY*

Transcript Sequence

Gene sequence data has not been registered.