Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr5g085950.1
CDS Infomation

| MMS19 nucleotide excision repair-like protein | HC | chr5:37149495-37160045 | 20140818
Sequence

ATGGCTGAAACCACTCAATTGACTCGTCACATTGACTCCTACATTCACTCCTCTTCCACT
TCAACTCACCAGGTTTCAAGTTTGGATGCAATTGGATTATTGATAAAGACCAATGCTTTA
ACTCTAGAAGCACTTGTTAGAGAGCTGGATGTGTATTTGACTTCAACAGATACCGTAATT
CGGTCAAGAGGAATTCTTCTTCTGGCGGAGGTGCTTACTCGCATCAATTCAATATCTCTT
GACAGTAAAACTATACATAGCTTGGTTGGGTTCTTCAAGGAAAGACTGGCAGATTGGAAA
GCAGTACGAGGTGCACTTGTGGGTTGCTTGGAACTTATAAGGAGGAAAAGTGATGTGGGT
ATGGTAACGGGTAGTGATGCCAAAGCCATTGCTCAATATTTTATACAACACTTGCATTTT
CAATCCTTAGGACTGTATGACAGGAAGCTATGCTTTGAACTGCTTGATTGCCTGCTAGAA
CATCATGCCGATTCAGTTGCCTCATTGGAGGAGGACCTTATTTTTGGATTTTGTGCAGCT
ATAGATGCAGAAAGGGATCCAGAATGTTTAATGCCTGCTTTTCATATTGTTGAGTCTTTG
GCACGATTATATCCTGATCCATCCGGTCTATTTGCAAGCTTTGCTAGAGATGTTTTTGAT
CTTTTAGAACCTTACTTTCCCATTCAGTTTACACATACAACCAGTGGGGATGCTCATGTG
CACAGAGATGACCTATCAAGGACTCTGATGAATGCATTCTCTTCTACACCTCTTTTTGAG
CCATTTGTTATTCCTCTCCTTCTTCAGAAACTTTCTTCTTCACTACATTCAGCAAAGATT
GATTCCTTACAGTATCTTCGAGTGTGCTCTTCCAAGTATGGAGCAGAGAGAATCGCAAAA
TATGTTGGGGCTATTTGGTCTTCATTAAAAGACACCATAAATACCTATTTAATGGAGCCA
AATTTCTCTTTTACTCTAGCACCCACAGATGGTATTGACTTTCCAAAGAATGAAGTTGTA
ATTGAAGCTCTGTCCCTCCTTCAGCAGCTTATTGTGCAAAATAGTAGTCAGTTAGTTAGC
TTGATAATTGATGACAAGGATGTCAACTTTATTATCAACAGCATTGCATCTTATGAGATG
TACGACGCTGTTTCTGTGCAAGAAAAGAAGAAACTACATGTTATTGGTCGCATTCTCTAT
ATTTTTGCCAAGACTTCCATTCCTTCCTGCAATGCCGTGTTTCAAAGTCTTTTACTAAGA
ATGATGGATAGTTTGGGATTTTCTGTTAGTAACATTGATGGCCTGAAAAATGCTGGTATT
TTAGCCTCACAAAGTGTCAACTTTGGGTTCCTTTATCTCTGTATAGAACTACTAGCAGGA
TGCAGGGAATTAGTTATTTTGTCTGAGGAAAAGCCTGGGACATGTTTCACCATACTTCAT
AGTTCCTCAGATTTCTTATTTAATTCCTTCTGTTCAGTCTTAGCTGTAAGTGCTGACAGA
TTCCCCCCTGATCCTGATATATACATTGGAGTGAAGGGCTTGCAGATTCTGGCAATGTTT
AATTTAGATGTTTTTCCAATACCAAAATCAACATTTGAGAATATTTTGAAGAAATTCATG
TCAATCATCATTGAGGATTTCAACAAAACAATACTATGGAATTCCACATTGAAATCATTA
TTTCATATTGGCTCATTGTTTCAAAACTTCAGCGAGTCTGAAAAAGCTATGAGCTACAGG
AGTTTTGTTTTAGACAAAACCATGGAACTGCTCTCTCTTGATGATATTTCTCTGCCTTTT
TCACTCAAATTAGAAGTATTATCTGATATTGGCATGACTAGCATGAAAAATATGCTAAAA
ATTCTTCAAGGGCTGGAAGGAGCTATATTTGCCAATCTTTCTGAGGTCCATAGAAATTTA
ACGTCTTATGATACTGCTGTTCAGCTTTTGGAGTGCTATTCATGCAAGCTACTTCCGTGG
ATCCTTGAAAATGGAGGTGCAGAGGAGTTCATACTGCAATTTTCTGTTGATATTTGGAAC
CAGGCAGGAAATTGCATGGATTTTAATTCTCCATTTGAAGAAAAGGGTCTACTTGATGCA
ACAATGAAAGCGATGAAATTTTCTGTTGGGTGTTGCTCTGAAGAGAGTCAAAATGTTATA
ATTCTGAAATCTTACAGTATACTATCATCACGTACCAATTTTCAGCTTAATGATGTTCAA
AGATTGCCATTAACTTTTGAAAAATATGACATCTCCCTTAGGGATGAAGGGATACTTTTA
TTATTTGCATCAGTAATTATTGCACTTCGCCCCAAAACACACGTTCCAAATATAAGAGGG
ATTTTGCATCTTTTTATAATAACCCTCCTCAAGGGTGTTGTTCCAGTTGCACAGGCTTTG
GGCTCTATGGTCAACAAACTCATTTCAAAATCCAATGGTGCAGAGAAGTCTGATGAACTT
ACCTTGGAAGAAGCTCTTCATATTATATTCAACACAAAAATATGCTTTTCTTCTGATAAT
ATGTTGCAGATATGTGATGGATCAATTAATAGGAATGAAATTGTTCTTACTGACGTATGT
CTCGGCATGACAAATGATAGACTACTTCAAACCAATGCAGTTTGTGGGCTCTCATGGATT
GGAAAAGGTTTACTGTTGCGTGGTCATGAAAAGATTAAAGACATCACTAAGATACTTACA
GAGTGCTTAATATCAGACAGAAATAGTTCCTTGCCTTTGATTGAAGGTTTAGATGAAAAT
AATGAAGAGCATAAAGGGGATCATTTGGCAAGAAAATGTGCAGCGGACGCTTTTCATGTT
CTTATGAGTGATGCTGAAGATTGTTTGAACCGAAAATTTCATGCCACGATGCGGCCTCTT
TATAAGCAGAGGTTTTTCTCTTCCATGATGCCCATCTTTCTGCAGTTGATCTCAAGATCT
GATTCTTCATCGTCCAGATATTTATTATTACGAGCCTTTGCACGTGTCATGTCTGTCACT
CCACTGATTGTTATACTGAATGATGCTAAAGAGCTCATATCAGTTCTTCTGGATTGCTTG
TCTATGTTGACAGAAGATATCCAAGATAAAGATATCTTGTATGGTCTGTTGTTAGTTTTA
TCTGGGATGTTGACAGAGAAAAATGGACAAGAAGCAGTCATTGAGAATGCACACATTATC
ATCAACTGTCTAATTAAACTTGTGGACTACTCTCATAAGACGCTTGTTCGGGAGAGTTGT
ATTCAATGTCTTGTTGCATTGTCTAAACTTCCCCATGTGCGTATCTATCCATTGAGAACA
CAGGTTCTAGAAGCAATATCAAAGTGTCTTGACGATACAAAGAGATCTGTTCGCAATGAA
GCTGTCAAATGTCGGCAAGCATGGGCATCAATTGCATCATCCAGGAGTCTTCGATTTTGA

Peptide Sequence

PEP ID

Medtr5g085950.1
PEP Infomation

| MMS19 nucleotide excision repair-like protein | HC | chr5:37149495-37160045 | 20140818
Sequence

MAETTQLTRHIDSYIHSSSTSTHQVSSLDAIGLLIKTNALTLEALVRELDVYLTSTDTVI
RSRGILLLAEVLTRINSISLDSKTIHSLVGFFKERLADWKAVRGALVGCLELIRRKSDVG
MVTGSDAKAIAQYFIQHLHFQSLGLYDRKLCFELLDCLLEHHADSVASLEEDLIFGFCAA
IDAERDPECLMPAFHIVESLARLYPDPSGLFASFARDVFDLLEPYFPIQFTHTTSGDAHV
HRDDLSRTLMNAFSSTPLFEPFVIPLLLQKLSSSLHSAKIDSLQYLRVCSSKYGAERIAK
YVGAIWSSLKDTINTYLMEPNFSFTLAPTDGIDFPKNEVVIEALSLLQQLIVQNSSQLVS
LIIDDKDVNFIINSIASYEMYDAVSVQEKKKLHVIGRILYIFAKTSIPSCNAVFQSLLLR
MMDSLGFSVSNIDGLKNAGILASQSVNFGFLYLCIELLAGCRELVILSEEKPGTCFTILH
SSSDFLFNSFCSVLAVSADRFPPDPDIYIGVKGLQILAMFNLDVFPIPKSTFENILKKFM
SIIIEDFNKTILWNSTLKSLFHIGSLFQNFSESEKAMSYRSFVLDKTMELLSLDDISLPF
SLKLEVLSDIGMTSMKNMLKILQGLEGAIFANLSEVHRNLTSYDTAVQLLECYSCKLLPW
ILENGGAEEFILQFSVDIWNQAGNCMDFNSPFEEKGLLDATMKAMKFSVGCCSEESQNVI
ILKSYSILSSRTNFQLNDVQRLPLTFEKYDISLRDEGILLLFASVIIALRPKTHVPNIRG
ILHLFIITLLKGVVPVAQALGSMVNKLISKSNGAEKSDELTLEEALHIIFNTKICFSSDN
MLQICDGSINRNEIVLTDVCLGMTNDRLLQTNAVCGLSWIGKGLLLRGHEKIKDITKILT
ECLISDRNSSLPLIEGLDENNEEHKGDHLARKCAADAFHVLMSDAEDCLNRKFHATMRPL
YKQRFFSSMMPIFLQLISRSDSSSSRYLLLRAFARVMSVTPLIVILNDAKELISVLLDCL
SMLTEDIQDKDILYGLLLVLSGMLTEKNGQEAVIENAHIIINCLIKLVDYSHKTLVRESC
IQCLVALSKLPHVRIYPLRTQVLEAISKCLDDTKRSVRNEAVKCRQAWASIASSRSLRF*

Transcript Sequence

Gene sequence data has not been registered.