Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr5g042370.1
CDS Infomation

| PPR containing plant-like protein | HC | chr5:18623271-18619747 | 20140818
Sequence

ATGCTTTTGAATCTTGAAATCAACACACTTTCACTTGTTGCTCCTCCACGTGAAACCATT
TCCATTCCCAGCAAAACCAGTCAACAACAACCACTGCTTGATTATCCCAATGACCCAGAA
GCTCGATTCAAGAATTTAAATCTGCACAAAAATGCTAATAAAAGGGTCAACAGTAATGGG
TTTGTTTTGAAGAAAAAGAACGTGCACACCAAGTGTTCGACGAAATGTGTAAATTACAAT
GGACGTGTTCTGGCGATTTTGCAAGCTTTGGATACCATACATGATTTGGATAAGGCACTT
GGACCATGGGAGAAGAGACTTGGCAAAAAGGAAATGAGTATTATATTGAAGGGACAAGTT
TGCTGGGAGAGGGCTTTGATGATTTTTGAGTGGTTTAAGCAAAAGGGTTGTTATGAATTG
AATGTGATTCATTATAATATAATGTTTTGGATTCTTGGGAAGGAGAGGAAGTGGAGATTT
TTGGAGAGTTTGTGGAATGAAATGAATGCAAATGGGGTTTTGCCGGTGAATTCAACGTAT
GGAACGTTGATTGATGTTTATAGTAAAAGTGGATTTAAAGAAGAAGCGCTTGGTTGGCTT
CAGAGGATGCTAAGTCAAGGGATGGAACCTGATGAGGTCACCATGGGGGTTGTTGTTCAG
TTGTACAAGAGGGCGCGAGAGTTTCAAAAAGCAGAAGAGTTTTTTAGGAAATGGTCACGA
GGGGAACCATTGGTAATAGCGATTGATCATAATACAGTTGATGTTCGTCATGTTTGCAAT
GAGGTATCACATGTCAATGTTTGTTTAAACTCACATACGTATAATACCTTAATTGACATA
TATGGGAAGGCCGGTCAAATTCAAGCAGTGTATGAAATTTTTGCTAAGATGATCAAACAA
GGTGTAGCGCCGACTACGGTGACGTTTAATACGATGATTCACTTGTATGGAAACCATGGA
CGCATACGGGAAGTGAGTTTGTTGTTGCAGAGAATGGAAGAGCTTCGATGCCCCCCTGAC
ACTAGGACATATAATATCCTTATTTCTGTTTTAGTTAAACATAATAATATCAAATTGGCA
GCAAAATATCTTATGAAGATGAAAGAGGCTTTCCTTGAGCCAGATCTAGTGAGTTATCGC
ACCCTCTTGTATGCATACTCAACTCGGAAAATGGTCCAAGAAGCTGAAGAGCTTGTACGA
GAGATGGATGAAAGAGGTCTTAAGATTGATGAGTTCACCCAAGCTGCCTTGACTAGGATG
TATGTAGAATCAAATATGCTGGAGCAATCGTGGTTATGGTTCAGGAGGTTTCACGTAGCT
GGAAATATCACTTCTAGCTGTTATTGCGCCAACATTGATGCATATGGAGAGCAAGGGTAC
ACATTAGAAGCAGAGAAAGTCTTTATGTGCTGCAAACAAAAGAAGAAGCTTAGTGTCCTT
GTGTTTAATGTGATGATTAAAGCTTATGGAATAGGCAAATGCTATGATAAAGCATGTCAA
CTATTTGATTCTATGGAGAAATTTGGTATTGTTGCAAATGAATGCAGCTACAGTTCTCTC
ATACATATTTTGGCCAGTGCCGACAAGCCACATATTGCGAAACCTTATCTGAATAAAATG
CAGGAGGCAGGATTGGTGAGTGATTGCATCCTGTATTGTGCTGTGATATCAAGTTTTGTA
AAGTTAAGCCAATTGGATATGGCGGAAGAATTATACATTGAGATGATTGGACATACTGTG
AAGCCTGATGCTATTATTTATAGTGTATTAATCAATGCTTTTGCTGATGTTGGAAATGTT
ATAAAGGCTACCGGTTATCTAGATCGAATGAGAAATGCAGGTTTCGTAGGGAATCAAGCC
ATATATAACTCTTTGATGAAGTTGTATACTAAAATAGGCTACCTGAAAGAAGCACAACAA
ACATACACATTGCTTCAATCATTAGATCAAGCTCCTTCTGTATTTTCTTCTAATTGTATG
ATTGATCTTTATACCGAGCGACTTATGGTTGAACAAGCGAAAGAAATATTTGAGAGCTTG
AAGAAGAACAACATTGCAAATGAGTTTTCGTATGCAATGATGCTATGTATGTATAAGAAA
ATTGGAAGATTGGATGAAGCCTTTCAAATTGCAAAACAAATGAGAAAACAAGGACTCTTG
ACTGATTTATTGAGCTATAACAATGTGCTTGGCTTGTATTCAATGGATAGAAGGCTAAGA
GAAGCTAAAGAAACTTTCAAGGAAATGATAGAATCTGGAATTCAGCCAGATGATTTTACA
TTCAGAGCTCTTGGACATCTTTAG

Peptide Sequence

PEP ID

Medtr5g042370.1
PEP Infomation

| PPR containing plant-like protein | HC | chr5:18623271-18619747 | 20140818
Sequence

MLLNLEINTLSLVAPPRETISIPSKTSQQQPLLDYPNDPEARFKNLNLHKNANKRVNSNG
FVLKKKNVHTKCSTKCVNYNGRVLAILQALDTIHDLDKALGPWEKRLGKKEMSIILKGQV
CWERALMIFEWFKQKGCYELNVIHYNIMFWILGKERKWRFLESLWNEMNANGVLPVNSTY
GTLIDVYSKSGFKEEALGWLQRMLSQGMEPDEVTMGVVVQLYKRAREFQKAEEFFRKWSR
GEPLVIAIDHNTVDVRHVCNEVSHVNVCLNSHTYNTLIDIYGKAGQIQAVYEIFAKMIKQ
GVAPTTVTFNTMIHLYGNHGRIREVSLLLQRMEELRCPPDTRTYNILISVLVKHNNIKLA
AKYLMKMKEAFLEPDLVSYRTLLYAYSTRKMVQEAEELVREMDERGLKIDEFTQAALTRM
YVESNMLEQSWLWFRRFHVAGNITSSCYCANIDAYGEQGYTLEAEKVFMCCKQKKKLSVL
VFNVMIKAYGIGKCYDKACQLFDSMEKFGIVANECSYSSLIHILASADKPHIAKPYLNKM
QEAGLVSDCILYCAVISSFVKLSQLDMAEELYIEMIGHTVKPDAIIYSVLINAFADVGNV
IKATGYLDRMRNAGFVGNQAIYNSLMKLYTKIGYLKEAQQTYTLLQSLDQAPSVFSSNCM
IDLYTERLMVEQAKEIFESLKKNNIANEFSYAMMLCMYKKIGRLDEAFQIAKQMRKQGLL
TDLLSYNNVLGLYSMDRRLREAKETFKEMIESGIQPDDFTFRALGHL*

Transcript Sequence

Gene sequence data has not been registered.