Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr5g040490.1
CDS Infomation

| disease resistance protein (TIR-NBS-LRR class) | LC | chr5:17801007-17804880 | 20140818
Sequence

ATGACTACCACAAAAGAGTTAAAATCCCAGGCCTCCTCTTCCTCTACCATTGAACGATGG
GCTTATGATGTTTTCCTCAGTTTTCGAGGAGAGGATACTCGAAATGGTTTTACCGGAAAC
CTTTATAAAGCTCTTTGTGGAAAAGGAATTAATACTTTCATAGATGATAAAAATCTTGGC
AAAGGAGAAGAAATCACACCAGCCCTCATGATGGCAATCCAAGAATCAAGGATTGCAATT
GTGATTTTCTCAGAAAACTATGCATCATCCACTTTTTGTTTGAAAGAACTTACAAAGATC
ATGGAGTGCATAAAACACAAGGGCAGGTTGGTTTTGCCAATTTTTTATCAAGTTGACCCG
GCTGATGTGCGCCATCAGAAAGGGAGCTACGCAAATGCACTGGCCAGTCATGAAAGAAAA
AAAACCATTGACAAAATAATGGTCAAACAGTGGAGGTTAGCTTTGCAAGAAGCAGCTAGT
ATATTAGGTTGGCATTTCGAACACGGGTACGAGTATGAGCTCATTGGGAAGATCGTTCAA
GAGGTCTCTAAAAAGATTAATCATAGACCTTTACATGTTGCCAAATACCCTATTGGTTTA
GAGTCTCGAGTGCAAAAAGTGAACTCACTTCTAGAAGTTGAATCAAATGAGGGGGTTCGC
ATGGTGGGGATTTATGGAATGGGTGGGTTAGGAAAAACAACTCTTGCATGTGCTGTATAC
AATTGCATTGCTGATCAATTTGATAGTCTTTGTTTTCTTGGTGATATTAGAGAAAATTCG
AAGAAGCGTGGGTTGGTAGAACTACAGGATATGCTTCTTTTTGAATTAACTGGGGAGAAA
GATATTAAGCTCTGCAGTTTAAATAAAGCAATTCCTATTATTGAAAGTAGGCTTCGTGGG
AGAAAAATTCTATTGATTCTGGATGACATTGACAGTTTAGAGCAACTAAAAGCACTTGCC
GGTGGACTTGAGTGGTTTGGTTCAGGAAGCAGAGTTATTATCACAACAAGGGACAAGCAT
TTGCTGCAGGTTTATGGGGTTGAAAGAGTCTATGAAGTAGAAGGATTGAAGCATGAAGAA
GCCCTTGAATTGTTTGTTTGGAATGCTTTCAAATCAAAAGAAGTCGAGCCTAGTTATTTC
GACATTGCAAAGAAAGTATTACTTTATTCTAAGGGTCTTCCATTGGCTATTGAAATAATA
GGTTCTGACTTGTATGGAAAAACAATATTGGAATGGCAATCTGCTATAGATACTTATGAA
AGAATTCCTCATGAAAATATTCAGGACATCCTTAGAGTAAGCTATGATGGCTTAAAAGAA
TTTGAAAAGGAAATCTTTTTAGACATCACTTGCTTTTTCAAAGGATACAAACTAAGTGAT
GTCATGAACATATTACATAGTGGCCGTGGCTACGCCCCAGACTATGCTGTCCAGGTCTTG
ATTGATAAGAGTCTAATAAAAATGAATGAATATCGTGTGAGGATACATGACATGATTGAA
GATATGGGTAGAGAAATTGTGAGGCTGGAATCACCCTCGAAGCCAGGTGGCCGCAGTAGA
TTATGGTTCACCAAAGATATTCTTCATGTTCTCAAAGAGAACAAGGGATCTGATAAAACT
GAGATCATTGTGCTAAACCTTCTCAAAGATAAAGAAGTTCAATGGGATGGAAATGCATTG
AAGAATATGGAAAACCTCAAGATACTGGTAATAGAGAAAACTCGCTTTTCCAGAGGACCT
AATCATCTTCCAAAAAGTTTAAGAGTGCTAAAATGGTTTGATTATCCTGAATCGTCATTG
CCGGCTCATTATAATCCAAAGAAACTTGTCATACTTGACCTGTCTGACTCTACGGGACTT
TTTACATTTGGCAATCAAATGATCATGAAATTTAAGTCTTTGAAGGAAATGAAGATAAGC
AAGTGTCAATCCTTAAAGAAAGTACCTGACATGTCTGGTGCTCCGAATTTGAAGAAACTG
CATCTTGATTCATGTAAAAGTTTGGTTGAAGTTCATGATTCCATTGGATTCCTTGAAAAA
CTTGAAGATTTGAATCTTAATTATTGCACCAGTCTCACGATTCTTCCTTACGGCATCAAC
TTACCTTCTCTTAAAACCATGTCCCTTCGGAATTGTACAACTGTCAAGAATTTTCCAGAA
ATTTTAGGGAAGATGGAAAACATAAAATACCTTGTTTTAAGTAATAGCGAGATAAGTGAA
TTACCCTACTCCATTGGACTTCTTGTGGGTCTTGTAAACCTTACTATAGACAGATGCAAC
AAGCTACTTGAACTACCGAGTAGTATTTTTATGTTGCCAAAACTTGAGACCTTAGAGGCT
TACTGTTGCAGGGGGCTTGCGCGAATTAAGAAGAGAAAAGGTCAAGTGCCGGAAACACTG
CCTTCAGATGTGAGAAATGCTAGTTCTTGTTTGGTTCATAGAGATGTTGACTTGAGCTTT
TGCTATTTGCCATATGAATTTCTTGCCACACTTCTTCCTTTCTTACACTATGTCACAAAT
ATATCTCTTGATTACAGCAGCATTACAATCCTTCCTTCAAGCATCAACGCGTGTTATTCT
TTGATGAAACTTACGATGAATAATTGTACGGAGCTTCGAGAAATCAGAGGCCTGCCACCA
AACATAAAACATCTTGGTGCAATAAATTGTGAATCACTGACTTCCCAATCCAAGGAAATG
CTACTAAATCAGATGCTGCTCAATTCCGGAATCAAATACATCATTTATCCTGGATCAAGT
ATCCCAAGTTGGTTCCATCAACGTACATGTGAACAATCCCAGTCCTTCTGGTTCCGTAAC
AAATTGCCAGAAATGGCGCTATGTCTTGTTGGAGTTTTAGGTAGTTGTGACTTTACGGCA
CGTAGTGATGAGTATATTTTCGACCTGATCATTGATAGAAATCAACAAAGCAATCACATT
TTCTATGTTAGATGGTCTGAAAATAATTTATTTGATACAAATCATATACTTCTGCTAGAC
GTGCAGCTCAAACCTAGCCTTGATATGATTGGAAGAGTACAATCTGAGAATGGATGGAAT
CATGCTGAACTTCTGTTGATGAAAAATGGCGGAGAATATATGAAATGGAGGAGAGTTTAT
GTACGAGAACAGATGATGAACATGCCAGACATTCTATTTATAAATCCTGAGGTTTCAATT
GGAAAAGAAAATAAAGAAGTAACCTGTGGGGATAAGAGATCACAAAAGAATTTACAAGAT
CTAACTAGTAGTACTCTTTGCATAAAAAAAATAAAAAAATCAAACTAG

Peptide Sequence

PEP ID

Medtr5g040490.1
PEP Infomation

| disease resistance protein (TIR-NBS-LRR class) | LC | chr5:17801007-17804880 | 20140818
Sequence

MTTTKELKSQASSSSTIERWAYDVFLSFRGEDTRNGFTGNLYKALCGKGINTFIDDKNLG
KGEEITPALMMAIQESRIAIVIFSENYASSTFCLKELTKIMECIKHKGRLVLPIFYQVDP
ADVRHQKGSYANALASHERKKTIDKIMVKQWRLALQEAASILGWHFEHGYEYELIGKIVQ
EVSKKINHRPLHVAKYPIGLESRVQKVNSLLEVESNEGVRMVGIYGMGGLGKTTLACAVY
NCIADQFDSLCFLGDIRENSKKRGLVELQDMLLFELTGEKDIKLCSLNKAIPIIESRLRG
RKILLILDDIDSLEQLKALAGGLEWFGSGSRVIITTRDKHLLQVYGVERVYEVEGLKHEE
ALELFVWNAFKSKEVEPSYFDIAKKVLLYSKGLPLAIEIIGSDLYGKTILEWQSAIDTYE
RIPHENIQDILRVSYDGLKEFEKEIFLDITCFFKGYKLSDVMNILHSGRGYAPDYAVQVL
IDKSLIKMNEYRVRIHDMIEDMGREIVRLESPSKPGGRSRLWFTKDILHVLKENKGSDKT
EIIVLNLLKDKEVQWDGNALKNMENLKILVIEKTRFSRGPNHLPKSLRVLKWFDYPESSL
PAHYNPKKLVILDLSDSTGLFTFGNQMIMKFKSLKEMKISKCQSLKKVPDMSGAPNLKKL
HLDSCKSLVEVHDSIGFLEKLEDLNLNYCTSLTILPYGINLPSLKTMSLRNCTTVKNFPE
ILGKMENIKYLVLSNSEISELPYSIGLLVGLVNLTIDRCNKLLELPSSIFMLPKLETLEA
YCCRGLARIKKRKGQVPETLPSDVRNASSCLVHRDVDLSFCYLPYEFLATLLPFLHYVTN
ISLDYSSITILPSSINACYSLMKLTMNNCTELREIRGLPPNIKHLGAINCESLTSQSKEM
LLNQMLLNSGIKYIIYPGSSIPSWFHQRTCEQSQSFWFRNKLPEMALCLVGVLGSCDFTA
RSDEYIFDLIIDRNQQSNHIFYVRWSENNLFDTNHILLLDVQLKPSLDMIGRVQSENGWN
HAELLLMKNGGEYMKWRRVYVREQMMNMPDILFINPEVSIGKENKEVTCGDKRSQKNLQD
LTSSTLCIKKIKKSN*

Transcript Sequence

Gene sequence data has not been registered.