Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr5g032380.1
CDS Infomation

| ubiquitin carboxy-terminal hydrolase | HC | chr5:13903707-13894717 | 20140818
Sequence

ATGGTGGTGTTTGAGATTTTAGGGTTTCAAGGTTTGGTTTATTTGCTGTTAGTTTTGGGT
TTTGTGGTGATTCGTTATGTTTGGAGAAATGCTGAAGAGAAGAGAGAAGAGGTTATGAGG
TTGGTACAAGATACTACTGCTTCTATGACTCATATGGAAGCTTATTCTGATTCAGATGAA
ATTTCATTTTCACCTTCAAATTCAGCTTCTTTTGAATCATCCAATTCAGTTTCATTTTCT
CATGGGTATCAATGTGCTGTTTGTTATTCTCCTACCACCATGCGTTGTGCTCGCTGCAAA
GCTGTTAGATACTGTTCGGGTAAGTGTCAAATTAGTCACTGGAGACAAGGTCACAAGGAT
GAATGTTGTCCTTCAATTACCACCACCAGGGAGGTCAACAACGAGAATGTTACATCTAGG
GCATCAGCATCAGGAACAGAATTTGATCTTCATGAAAGCAAAGGAAATCATGTTAGTGTT
GGATCTTACAACGATTCACATTCCAACATTAATCCTTCTGTTGCTGCAAGAGAATCATTG
GATGATAACCGTCACGAGACTCATGACTCATTTACGAAACCTGTCAGTGATAATACTGCT
AATGACACATCTGTAGCTTCCACCGACAACGACGGAACCGTGTTGCACTCCTCATTTCCT
TTGGAATCTAAAAATCCTGTCAATATTGAAGTTAAGAATTCTAGTTCAAGTAAAAGAAGC
AAGAAAAAGTCTAGCAACACTACCGATGAGACTGGATTTGAATCAAAAGTTCCAAAAGCT
AAATCCGACACATATCATGATGAGGCATCAAAGTGGGGTGGCCATCAACACAAAAGAAGA
GTTTCATTTGTTGAAAAACCAATAACAGATACTTCTAAGTGCAGGACTGTGCCTTCCTTG
AGTAATTCAAATACCGATGTTCTAGCTGACAATGTGGAAGAATCGCATTTGTCCAGGTAC
AAAGAAGCACGGAGATCATCATGTAGTTCTCGTGATCGAATATCTTCAACTACTAAGGAG
GATTTGATTTCACATTCCAAGTCTACGAAAACTGACAATTATCATGCCTTGCCTTCAAAA
GTCAGCGTTGTTCCAAATCTTCAACAAAATGTTCGTAATGGTTTGAAAACATCAATGCAG
AAAGTTGTCCAGCAGTTTAGAAGCTCAAAAGAGTCAAGATCCAATCTAACATCTGTTGAA
AATGAGTTGGGCTTTCCTTATGAACTTTTCGTGGAACTTTATTGTTATGACAAGGTGAAA
CTATTTCCCTTTGGCCTTACAAACTGTGGGAACAGCTGTTACGCTAATGCAGCACTCCAA
TGCTTGGCGTATACTCAGCCTCTAACATCGTATCTTTTGCAAGGGTTCCATTCGAAACGA
TGTCAGAAGAAGGGATGGTGTTTTATGTGCGAGTTTGAATATCTAATTCAGAAGGCAAAA
GAAGGGACGTCTCCACTTTCTCCAATTGGGATATTATCTAAGATACACAAGATTGGAAGT
CATCTTGGACATGGGAGAGAGGAAGATGCACATGAATTTTTGAGGGGTGCAGTTGAGACT
ATGCAATATATTTGCCTCAAGGAAGCCGGTGTATCAAGTCCTTTGACAGAAGAAACAACT
CTCATTGGATACACTTTTGGAGGATATCTACGATCTAAGATAAAGTGCTTAAGGTGCCTG
GGGAAATCTGAGAGGTATGAGAGAATGATGGATCTTACTGTTGAGATTGATGGAGATATT
GAAACTTTGGAGGAGGCTCTTGGACAATTTACAGCGCCTGAAATATTAGATAAAGATAAT
AAGTATAATTGTGGCAGATGTAAATCGTACGAGAAAGCCAAGAAGAAGTTAACGGTACTG
GAGGCACCAAATATTCTTACAATCGTATTAAAACGATTTCAGTCTGGTAACTTTGAGAAG
TTGAATAAGTCAGTTCAGTTCCCAGAAGTCCTGGATATGACTCCATACATGAGTGGAAGA
AAGGATAAATCTCCATTTTACAGTCTTTATGCAGTGGTTGTCCATTTGGATATCATGAAT
GCTTCATTTTCAGGCCATTATGTTTGTTATGTGAAGAACATTCAAGGAGAATGGTTCAGG
ACTGATGACAGCAGGGTAGAACCTGTCGAATTGTCAAGAGTCTTATCAGAAAGCGCATAC
ATGCTTCTTTATGCAAGGCACTCTCCGAAACCCCTGGGTTCTGTAAGTAGCAATGCAACC
TTTTCAACTGGAAAGTTCAAGAGGAGAAGCTTGGAAGCCATTCCTGCTGTTTCTAAGACG
CGGTCGAATTCCATGGCTACAAATGCTGATTCTCCCTCCGTACAGCAGAAGCAGGGACAG
CACTCTCACCGGAATGCCGTTGATGATTCCTTTAGCAATGAATCTGTCCCAGAAGAATGG
AGATTCAACTATCGGGGAAGAAATACTATGGTGGATTCTGCTAGCGAAAGCTCAGTTTTC
AGCTCTTCTGATGCAAGCTCTTGCAGTACTGCAAGTACTAAGGACTCGGCTAGTACTGCT
GACTTTTCAGATTACATTTTTGGTGAAGCAGGGTCCAATTGGCATGGCCAGTATGGAATT
TCTTCCAACTCGGCTGCATCTTCTTCCTATGATAACTTGCATACAGATTTTTCAGTGGAC
AATGATGCTGATAGGAGGCTCCAGCAAAACTCGGAAGATAAAGCAATTTTGTATGCTAAC
AAAAACAAAAATCATAGTGGTAGATGGGGAATTGACCTTAAAAAATTTGTCACTGCTAAG
CACCATGACAAAAGTTCTGCTGTACATGTGAGAAGAACAAGTAGAGATGCATCAGCTCAA
ACATTTTATTGA

Peptide Sequence

PEP ID

Medtr5g032380.1
PEP Infomation

| ubiquitin carboxy-terminal hydrolase | HC | chr5:13903707-13894717 | 20140818
Sequence

MVVFEILGFQGLVYLLLVLGFVVIRYVWRNAEEKREEVMRLVQDTTASMTHMEAYSDSDE
ISFSPSNSASFESSNSVSFSHGYQCAVCYSPTTMRCARCKAVRYCSGKCQISHWRQGHKD
ECCPSITTTREVNNENVTSRASASGTEFDLHESKGNHVSVGSYNDSHSNINPSVAARESL
DDNRHETHDSFTKPVSDNTANDTSVASTDNDGTVLHSSFPLESKNPVNIEVKNSSSSKRS
KKKSSNTTDETGFESKVPKAKSDTYHDEASKWGGHQHKRRVSFVEKPITDTSKCRTVPSL
SNSNTDVLADNVEESHLSRYKEARRSSCSSRDRISSTTKEDLISHSKSTKTDNYHALPSK
VSVVPNLQQNVRNGLKTSMQKVVQQFRSSKESRSNLTSVENELGFPYELFVELYCYDKVK
LFPFGLTNCGNSCYANAALQCLAYTQPLTSYLLQGFHSKRCQKKGWCFMCEFEYLIQKAK
EGTSPLSPIGILSKIHKIGSHLGHGREEDAHEFLRGAVETMQYICLKEAGVSSPLTEETT
LIGYTFGGYLRSKIKCLRCLGKSERYERMMDLTVEIDGDIETLEEALGQFTAPEILDKDN
KYNCGRCKSYEKAKKKLTVLEAPNILTIVLKRFQSGNFEKLNKSVQFPEVLDMTPYMSGR
KDKSPFYSLYAVVVHLDIMNASFSGHYVCYVKNIQGEWFRTDDSRVEPVELSRVLSESAY
MLLYARHSPKPLGSVSSNATFSTGKFKRRSLEAIPAVSKTRSNSMATNADSPSVQQKQGQ
HSHRNAVDDSFSNESVPEEWRFNYRGRNTMVDSASESSVFSSSDASSCSTASTKDSASTA
DFSDYIFGEAGSNWHGQYGISSNSAASSSYDNLHTDFSVDNDADRRLQQNSEDKAILYAN
KNKNHSGRWGIDLKKFVTAKHHDKSSAVHVRRTSRDASAQTFY*

Transcript Sequence

Gene sequence data has not been registered.