Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr5g024100.1
CDS Infomation

| PPR containing plant-like protein | HC | chr5:9654442-9656866 | 20140818
Sequence

ATGATTGGGCGTGCGTTGTTGGAACCATTTTTGCTATCACTAGCAAAGAAATCAAATCCC
ATAATACTAACACAATGCAATCAAATCCATGCACAACTCATAATCACCCAATACATTTCA
CAAACCCATTTAGCAAACACCCTTTTGAGTTTCTACTCAAAATCTTCAAACTTTCACTAT
GCCCACAAACTGTTCGACAAAATGCCTAACAGAAATGTTGTCACTTGGACAACCTTAATT
TCATCACATCTCAAATATGGGTCTGTTTCAAAAGCCTTTGAGATGTTCAATCACATGCGT
GTGTCGGATGAGAGACCAAATGAGAACACTTTCGCTGTTTTGCTTCGAGCATGTACCAAC
CGTGAACTTTGGAGTGTTGGTTTGCAGATTCATGGCTTGCTTGTTCGGTGTGGGCTTGAG
AGAGAAAAATTTGCTGGGAGTTCTCTTGTGTATATGTACTTGAAAGGTGGCGATGATTTG
AGGGATGCGTTACGTGTTTTTTATGGATTGTTGGAGAGAGATGTTGTTGCTTGGAATGTT
ATGATTTCTGGGTTTGCTCAAAATGGTGATTTTCGCATGGTGCAAAGGTTGTTTTCTGAA
ATGTGGGAAGAGCAAGGGTTGAAACCTGATAGAATCACCTTTGCTAGTTTACTCAAGTGT
TGTTCTGTGTTGAACGAGGTAATGCAAATTCATGGGATTGTGTATAAGTTTGGTGCTGAA
GTTGATGTTGTGGTTGAGAGTGCTATGGTTGACTTGTATGCCAAATGTAGAGATGTGAGT
TCCTGCAGGAAGATTTTTGATTCCATGGAGAAGAAGGATAATTTTGTTTGGAGTTCAATG
ATTTCGGGCTATACCATGAATAATAGAGGAGAGGAAGCTGTGAACTTTTTCAAGGATATG
TGCAGACAAAGGGTGAAACTGGATCAGCATGTGTTATCTAGTACTTTGAAAGCTTGTGTT
GAAATAGAGGACTTGAATACTGGTGTTCAAGTACATGGCTTAATGATAAAAAACGGGCAT
CAGAATGATTGTTTTGTAGCAAGTGTGTTGTTGAATCTCTATGCTAGTTTTGGTGAACTA
GGAGATGTGGAAAAGTTGTTTAGCAGGATTGATGATAAAGATATTGTAGCATGGAACTCT
ATGATCTTGGCTCAAGCTCGGCCAGGTCAGGGATGTGGTCGTTGCATGCAACTATTTCAA
GAGCTTCGACGGACAACCTTTTTGCAAATTCAAGGTGCCACTCTGGTTGCTGTTTTGAAG
TCTTGTGAGAAAGACTCAGATTTACCTGCAGGTAGACAAATTCATTCACTTATAGTGAAA
TCAAGTTTGTGTCGTCATACTTTGGTTGGCAATGCGTTAGTCCACATGTACTCTGAGTGT
AAACAAATTGATGATGCATTTAAAGCTTTTGTTGACATTGTAAGGAAAGATGACAGTTCA
TGGAGTTCGATTATTGGAACTTGCAAACAAAACAGGATGGAATCCAAAGCTTTAGAGCTA
TGCAAAGAGATGTTAGATGAAGGAATCAATTTTACAAGTTATAGCCTTCCACTGTGTATT
TCAGCCTGCTCACAACTTTTAACTATAAGTGAGGGTAAACAGCTCCATGTTTTTGCCATC
AAGTCCGGTTACAGCTGCGATGTCTACATTGGGAGTTCCATTATAGATATGTATGCTAAA
TGCGGGAACATAGAGGAGTCAGAGAAAGTTTTCGACGAACAATTAAAGCCAAATGAAGTA
ACTTTCAATGCCATAATCTCTGGATATGCACATCATGGAAAAGCACAACAAGCCATAGAA
GTATTAAGTAAGTTAGAGAAGAATGGTGTGGCCCCCAATCATGTCACTTTCTTAGCTTTG
ATGTCAGCCTGTAGCCATGCAGGGTATGTAGAAGAAACTTCGCATTTGTTTACATTGATG
CTTGACAAATACAAGATTAAGCCAAAATCGGAGCATTATTCGTGCTTGGTTGATGCCTAT
GGTCGTGCGGGAAGGCTAGAAGAAGCTTACCAGATAGTGCAAAAGGATGGAAGTGAATCA
GCTTGGAGAACGTTACTTAGTGCTTGTAGGAATCATAGTAACAGAAAAATTGGAGAAAAA
TCTGCCATGAAGATGATAGAATTGAATCCTAGTGATCATGCTCCTTATATTCTTCTTTCG
AACATTTACATTGAAGAGGGAAATTGGGAAGAAGCTCTTAATTGTAGGAAGAAAATGGCT
AAGATTCGTGTGAAGAAAGATCCAGGAAATAGTTGGTTGATTTGA

Peptide Sequence

PEP ID

Medtr5g024100.1
PEP Infomation

| PPR containing plant-like protein | HC | chr5:9654442-9656866 | 20140818
Sequence

MIGRALLEPFLLSLAKKSNPIILTQCNQIHAQLIITQYISQTHLANTLLSFYSKSSNFHY
AHKLFDKMPNRNVVTWTTLISSHLKYGSVSKAFEMFNHMRVSDERPNENTFAVLLRACTN
RELWSVGLQIHGLLVRCGLEREKFAGSSLVYMYLKGGDDLRDALRVFYGLLERDVVAWNV
MISGFAQNGDFRMVQRLFSEMWEEQGLKPDRITFASLLKCCSVLNEVMQIHGIVYKFGAE
VDVVVESAMVDLYAKCRDVSSCRKIFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDM
CRQRVKLDQHVLSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGEL
GDVEKLFSRIDDKDIVAWNSMILAQARPGQGCGRCMQLFQELRRTTFLQIQGATLVAVLK
SCEKDSDLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSECKQIDDAFKAFVDIVRKDDSS
WSSIIGTCKQNRMESKALELCKEMLDEGINFTSYSLPLCISACSQLLTISEGKQLHVFAI
KSGYSCDVYIGSSIIDMYAKCGNIEESEKVFDEQLKPNEVTFNAIISGYAHHGKAQQAIE
VLSKLEKNGVAPNHVTFLALMSACSHAGYVEETSHLFTLMLDKYKIKPKSEHYSCLVDAY
GRAGRLEEAYQIVQKDGSESAWRTLLSACRNHSNRKIGEKSAMKMIELNPSDHAPYILLS
NIYIEEGNWEEALNCRKKMAKIRVKKDPGNSWLI*

Transcript Sequence

Gene sequence data has not been registered.