Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr5g018230.1
CDS Infomation

| PPR containing plant-like protein | HC | chr5:6777784-6780862 | 20140818
Sequence

ATGTTGAAGAAAGCTTTCGAAACCCCTCGCTTCTTCGGGTTCCGCCGCAACCACAACAAT
TCTCTCACAACCTCTTCCGTTAGTTCCGACCAACGAGGTATTCGTTTCTGCATCTGGGTA
GCTCTCAAATTTGAGAATCTTAGCTACGAACCTTATTGCTTGGTTAACCGTATCATTTTC
CATAAAAATTGGTATTCCATTTACTGGGAAGCTCTTGAGCTTCTCAAGAAAAATGGTGTT
TTAGTAACTTCAGATTCCGTTAGAGCTTTGGTTAGATCTTATTCTCATATGGGTTATACC
GAAAAAGCTATAGAATCATTCAGTAGAATGCGTGAATTTGGTATTGAACCTGATGCTCAT
ATGTATAACACAATTTTGAGAGATGTGTTGAATGAAAAGTTACTTGAGCTTGCTCTTGCA
TTGTATACTACCATGCTTAAATCCAATGTTGAGCCTAATTTTTATACTTATAATATGTTG
ATTGATGGCTTTTGTAAAAGGGGTGAAGTTAAGGGCGCACAGGAGATGCTCGATGAAATG
AAGAGAGTTGGTATTGTTCCTTGTGTCCTATCGACGACTTCGATTCTTTATGGGTGTTGT
CAGGCGAACAATGTGGATGAGGCGCATAAGTTGTTTAATGATATGAAAGAAACAAGCTAC
CCGCCAGATATGATTTCTTGTAACGTTGTTCTTAATGGGTTTTGCAAGATGGGGAGGCTA
GAGGAAGCACTTTCTTTTGTATGGATGATAAAGAACGATGGTTTCTCCCTTAATCGAAAT
AGCTATGCTTCTCTTATTAATGCATTTTTTAAGGCAAGGAGATATAGGGAAGCACATGCG
TGTTATACAAAGATGTTTAAGGAGGGGATTGTGCCTGATGTTGTTTTGTACGCTATTATG
ATACGTGGTTTGTCGAAGGAGGGCAGGGTTGGTGAAGCTGCTAAGATGTTAGAGGAGATG
ACTCAGATAGGTTTAACTCCTGATTCTTATTGCTACAATGCTGTAATTCAAGGTTTATGT
GATGTAGATCTTTTGAATCGAGCACAGTCTCTTAGTCTTGAAATTTCCGAGCACAATGTT
TGCACGCACACAATTCTCATATGTGAAATGTGTAAGCGAGGAATGGTTGCTGAGGCACAA
GAATTATTTAATCAAATGGAGAAGCTTGGATGTGAACCTTCGGTTGTGACCTTCAATACG
CTTATAAATGGACTGTGCAAAGCTAAAAATCTTGAGAAAGCAAAAAATTTATTTTGCAAG
TTGGAGGTTGGGAGAAGACATTCGTTACACCTCAGTCTTTCTCAGGGTTCTGGTCAGGTT
TCTGATAGTGCCAGGCTCCTGAAAAAGGCAAAGGAAATGTGTGAGGCGGGACAAATTTTG
AGGGCTTACAAGTTAATCACTGATCTTGCTGGCGAGGTTAAGCCTGACATCATTACATAC
AACATTCTACTCAATGCCCTTTGCATGGATCGTGAAGTTAACGCTGCTTATAATTTTTTT
GAGTTCCTGCAAAAGAAGGGTTATCCCTCACCCGATAATGTTACGTATGGGACAATTATC
AAAGGGCTGTTCATGGTTGATAGAGAAGATGAGGCATTTAAGGTTTTTCAACGTATGCAG
AAGACTGGCTCTGAACCTACCCTTTCAGTTTATAGAACACTTATGACTTGTTTGTGTAGA
AAGAGCAAGGTCTCACGTGCATTCACTCTTTATTTGGAACATTTGAAGAGCCTTCCTAGT
CGGGACAACGACTCAATCAGTACTCTAGAAAAATATTTATTCGGAGAAAAATTGGAACAA
GTGATTCGAGGTTTACTTGAACTGGACTTCAAGGCCAGAGATTTTAAATTAGCTCCATAT
ACAATTCTACTTATTGGGTTCTGTCAAGCAGGAAAAGTATCCGAAGCATTAATTATATTA
TCTGTTCTTGATGAGTTCAATATCAAAATCAACGCTACAAGTTGTGTACATTTGATCAGA
GGCCTTTGTAAGGAACAGAGGCTACATGATGCAGTAAAAATATTTCTTTACAGTCTTGAG
AAGGGTTTCATGTTGAAGCCAATGATTTGTAATCACCTCCTCACGTGTCTTCTTTATTCC
CGAGATTATAAGGAGTGTGCTGTTGATCTTATTGATAGGATGGAATCTTTTGGATACCGT
TTAAATTCAGAAGAATTTGCAACGACATTGACACTTTTACACCACTACCAAAAAGGAAGG
AAAAGAAAAATAACCATCAGAAAAGATTAA

Peptide Sequence

PEP ID

Medtr5g018230.1
PEP Infomation

| PPR containing plant-like protein | HC | chr5:6777784-6780862 | 20140818
Sequence

MLKKAFETPRFFGFRRNHNNSLTTSSVSSDQRGIRFCIWVALKFENLSYEPYCLVNRIIF
HKNWYSIYWEALELLKKNGVLVTSDSVRALVRSYSHMGYTEKAIESFSRMREFGIEPDAH
MYNTILRDVLNEKLLELALALYTTMLKSNVEPNFYTYNMLIDGFCKRGEVKGAQEMLDEM
KRVGIVPCVLSTTSILYGCCQANNVDEAHKLFNDMKETSYPPDMISCNVVLNGFCKMGRL
EEALSFVWMIKNDGFSLNRNSYASLINAFFKARRYREAHACYTKMFKEGIVPDVVLYAIM
IRGLSKEGRVGEAAKMLEEMTQIGLTPDSYCYNAVIQGLCDVDLLNRAQSLSLEISEHNV
CTHTILICEMCKRGMVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKAKNLEKAKNLFCK
LEVGRRHSLHLSLSQGSGQVSDSARLLKKAKEMCEAGQILRAYKLITDLAGEVKPDIITY
NILLNALCMDREVNAAYNFFEFLQKKGYPSPDNVTYGTIIKGLFMVDREDEAFKVFQRMQ
KTGSEPTLSVYRTLMTCLCRKSKVSRAFTLYLEHLKSLPSRDNDSISTLEKYLFGEKLEQ
VIRGLLELDFKARDFKLAPYTILLIGFCQAGKVSEALIILSVLDEFNIKINATSCVHLIR
GLCKEQRLHDAVKIFLYSLEKGFMLKPMICNHLLTCLLYSRDYKECAVDLIDRMESFGYR
LNSEEFATTLTLLHHYQKGRKRKITIRKD*

Transcript Sequence

Gene sequence data has not been registered.