Plant GARDEN
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TOP > About the Species(Medicago truncatula ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr5g009530.3
CDS Infomation

| ubiquitin ligase cop1, putative | HC | chr5:2302327-2306619 | 20140818
Sequence

ATGGATGAAGAATTAGTTGATGACAGAATTCAGTTAGAGGCTGTTGAGGATTCACAGCGT
CAGAACAAAGACGACGTCCTCGTAAAATCCCAATATGATGGTAAAAATGTAGTTGAAGCA
GCAGATACATCACAACATCAATATGAAACAGTTGAAGAATTAACAGTGAAAAGTTACAAT
GGTTTTAGTTTTGATATTGGTACTTCTACTACACAAGTTCAACATAAACATTGGCAAAAT
CTTTATCAGATTGGAAATAATTCAGGGAATGTGAATTCAATTAGTGATATTGGGTTGATT
AATAGTGGGCCTGCGGCTACGTCTAGTGCTTGGGAGGATGTTGGATCCACCTCGTTTCCG
GAGTTATTAGCTAGAAAATCGCATAGTGATGGTCAGAGTAATGTTGTTGAACATTTGGCG
GCTGCGGAAAGTAAAGAGGGAGTAGGACCCGCAGGTGATGTTCGTCGAGGAATACGGACA
AAGATGATATCCAAATCAGGGTTTGCTGAGTATTTTATTAAAAATACGTTGAAGAGTAAG
GGTGTTGTACGTAAAGGTCCAGCTTCGGATCGCGTATATGTCCAACCTAGAGAGCAAAAT
CAGACAAAGACGGGCGGTGATGCAAATCAGAATTGGGGTAAGATTGGCGTTGGCGCATAT
AAGAATCAGATGAAGACGAGCATTGATACAGAGCAGAAACAAATAAAGACTGGTACTGGT
GCTCAGTCAAACTGTAATGTATCAGTGAACCGTGGTTCCAAGACTGCAAAGTTTCCGATT
CACAGTGATGCTGCAGTGCCTAAATCTAGCATGACTGAATGTGACGGTGTAACATTGAGA
GAATGGTTAAAATCTGGCCAGCGCAAATCAGGCAAAGTGGAAAGTTTGAATATATTTAGG
AAAATTGTGGATTTGGTGGATGACTCGCACTCTCGGGGATTTGCGTTGCATAACCTTTGT
CCATCTTACATTAAATTTCTACCATCGAATCAGGTCATGTACATTGGGTTACCTACTCAA
AAACAGACGGCAGGTAAAAGGGTGTCTGAGCAAGTAACATCTTCTGTTGATATGGGGTCC
AAGAAACAAAAATTTGACGAGAGTGGGAGGGTTACTGGGAGTGACTTGTGTCCTGAGACT
GCTAATCATCATGAAGTTCAAACTCCTTCAGTTGGATCACAAGATTATCGTAATGGATAT
GAGGAAGATAACCAATTTTCTGTGTATAATTTTGGGAGAATGTCTAGCATCCCTCGTGTA
TCTAATTCAGGTCAATTGTCATCTACTTGTAATTCTTTATGTGAAAGATGGGAAAATAAG
TGGTATGCGAGTCCTGAGGGAGGTTGCACAACATCATCAAACATCTACTGCCTCGGTGTC
CTCCTTTTTGAGTTACTAGGTCATTTTGACTCTGAAAGGGCGCATATTGCAGCAATGTCT
GATCTTCATCATAGGATTCTTCCTCCAGCTTTCCTATCAGAAAATCCTAAGGAAGCTGGA
TTTTGTCTCTGGCTGCTGCATCCTGAACCATCATCACGTCCAACAACAGGGGAAATCCTA
CAATCTGAAGTGATTAATGGATTACAGGAGTTGTGTAATGAGGAATTGTCATCATGTATA
GACCAAGAAGATGCAGAATCAGAATTGTTATTGCATTTCCTCATCTCATCGAAAGAGCAG
AAGCAGGGTGATGCCTCCAAGTTGGTTGAACAATTAGAGTGCTTGGAATCAGATATAGGA
GAGGCAGAGAGGAGGCATGGCTTAAGAAAATCCTTGGTTTCATCTGGCTGGCAGAACAAT
TACTCTTGTCAGAAAGTGATTTCGCCTCTTCAAAAGGAATTTTTGAGTGTAGAAAGACCG
CCCACAGTGTCCCCAATCTCCAATACAAATGAACTGAGATTGATGAAAAATATAGGCCAT
CTTGAAAGTGCTTACTTTTCCATGAGATCCAAAGTTCAGATTTCCGAAACAGATGCCACA
GATCACCCAGATAAAGATATACTAAGAACTCGCGAGAACTGGTCTGTGACCCAAAAAGGC
GAGGAGCAGCATAATAGTAAAGATGCTTTAGGAACCTTCTTTGATGGTTTGTGCAAGTAT
GCACGTTACAGCAAGCTTGAAGTGCGGGGTATACTAAGAAATGCAGATTTTAACAATCCT
GCAAATGTTATATGCTCTCTGAGCTTTGACCGGGATGAAGATTACTTTGCTTCTGCTGGG
ATATCTAAGAAAATAAAAATCTTTGACTTCAATACACTTTGCAATGACTCTGTTGATATC
CATTATCCTGCTGTTGAGATGTCAAACAGATCAAAGCTTAGCTGTGTTTGCTGGAATAGC
TATATTAAGAACTATCTTGCTTCTACAGACTACGACGGTGTAGTGAAGGTATACTTGCAG
ACACCACCTGAATTATTGTTTTATCATTGA

Peptide Sequence

PEP ID

Medtr5g009530.3
PEP Infomation

| ubiquitin ligase cop1, putative | HC | chr5:2302327-2306619 | 20140818
Sequence

MDEELVDDRIQLEAVEDSQRQNKDDVLVKSQYDGKNVVEAADTSQHQYETVEELTVKSYN
GFSFDIGTSTTQVQHKHWQNLYQIGNNSGNVNSISDIGLINSGPAATSSAWEDVGSTSFP
ELLARKSHSDGQSNVVEHLAAAESKEGVGPAGDVRRGIRTKMISKSGFAEYFIKNTLKSK
GVVRKGPASDRVYVQPREQNQTKTGGDANQNWGKIGVGAYKNQMKTSIDTEQKQIKTGTG
AQSNCNVSVNRGSKTAKFPIHSDAAVPKSSMTECDGVTLREWLKSGQRKSGKVESLNIFR
KIVDLVDDSHSRGFALHNLCPSYIKFLPSNQVMYIGLPTQKQTAGKRVSEQVTSSVDMGS
KKQKFDESGRVTGSDLCPETANHHEVQTPSVGSQDYRNGYEEDNQFSVYNFGRMSSIPRV
SNSGQLSSTCNSLCERWENKWYASPEGGCTTSSNIYCLGVLLFELLGHFDSERAHIAAMS
DLHHRILPPAFLSENPKEAGFCLWLLHPEPSSRPTTGEILQSEVINGLQELCNEELSSCI
DQEDAESELLLHFLISSKEQKQGDASKLVEQLECLESDIGEAERRHGLRKSLVSSGWQNN
YSCQKVISPLQKEFLSVERPPTVSPISNTNELRLMKNIGHLESAYFSMRSKVQISETDAT
DHPDKDILRTRENWSVTQKGEEQHNSKDALGTFFDGLCKYARYSKLEVRGILRNADFNNP
ANVICSLSFDRDEDYFASAGISKKIKIFDFNTLCNDSVDIHYPAVEMSNRSKLSCVCWNS
YIKNYLASTDYDGVVKVYLQTPPELLFYH*

Transcript Sequence

Gene sequence data has not been registered.