Plant GARDEN
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TOP > About the Species(Medicago truncatula ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr5g008840.1
CDS Infomation

| pentatricopeptide (PPR) repeat protein | HC | chr5:1959596-1956593 | 20140818
Sequence

ATGGAAGTCAAGAGTTTGAACTTGATAAACCTATTGCAATCTTGCATAACAAACAAATCA
CTATCTTCCGCTAAAATCATCCACGCTCGAATCTTCCGTTTCACCCTTTTCTCCGACACA
TTTCTCTGTAACCACCTCATAGATCTCTACTCAAAATGCAATCAAATCACTTCCGCACAC
CATGTGTTTGACAAAATTCCCCACAAAAACATCTTCTCATATAACGCCATTTTATCCGCA
TTTTGTAAATCCAACAACTTGCAATATGCTTGTCGTTTGTTTCTTCAAATGCCGGAAAGA
AATACAGTTTCTTTGAACACTATAATCACCACTATGGTGAAAAATGGATATGAAAGACAA
GCATTGGATACTTATGATTTGATGATGGTATATGAGTCGGTTAAACCTTCGCATATAACG
TTTGCTACTGTTTTTAGTGCTTGTGGTGGTTTAAAAGATGTAAATTGTGGTAGAAGAAAT
CATGGGTTGGTGTTAAAAGTTGGCTTTGATAGTAATATTTATGTGAGTAATGCTCTTTTG
TGTATGTATACGAAGTGTGGATTAAATGAGGATGCTTTTCGTGTTTTTGAGGGGATTGTT
GAACCGAATGAGGTTACTTTTACTACGATGATGGGTGGATTATCACAAACGAATCAAGTT
AAAGAAGGTTTGGAGTTGTTTAGACTTATGTTAAGAAAAGGGATTTGTGTTGATTCTGTT
TCGTTGTCTACTATCTTGGTTATTTGCGCAAAAGGAGTGTCTTTTGGTGTTTGTGATGAT
AGTCGTGGTTTATCGACTAATGCACAAGGAAAACAGATACATACTCTCGCGGTTAAACAT
GGGTTTGAGAGAGATCTTCATTTGTGTAATTCTTTGCTTGATATGTATGCTAAAACTGGG
GATATGGATAGCGCTGAAAATGTTTTTGAAAATTTGGATAAGCACAGTGTTGTTTCTTGG
AATATAATGATATCTGGGTATGGGAACAGATGCGACAGTGAGAAAGCTCTTGAGTGTTTT
CAAAGGATGCAGTGTTGTGGATATGAACCAGATGATGTTACTTATATTAATATGCTGACA
GCATGTGTTAAATCTGGGGACGTTAAAGTTGGGCGTCAAATATTTGACTGCATGTCGAGC
CCGAGTTTGATTTCATGGAATGCCATTCTTTCGGGTTATAACCAAAGTGCAGATCATGGA
GAGGCAGTTGAACTGTTTAGAAAGATGCAGTTTCAATGGCAGAATCCTGATAGGACTACT
TTGGCCATCATTCTTAGTTCATGTGCTGAATTGGGACTTCTTGAGGCTGGAAAACAGGTT
CATGCTGTTTCTCAAAAGCTTGGATTTTATGATGATGTGTATGTTGCAAGTAGCCTTATT
AATGTGTACTCGAAATGTGGGAAAATGGAGGTGTCTAAGCATGTATTCAGTAAACTGTCT
GAACTAGATGTTGTTTGTTGGAACTCAATGATAGCAGGGTTCTCAATCAATTCTCTTGAA
CAAGATGCTTTGGCTTGTTTTAAACGGATGAGACAATTTGGCTTCTTTCCTTCCGAGTTT
TCTTTTGCTACCATAGCAAGCTCTTGTGCGAAACTTTCCTCCTTGTTTCAAGGACAACAA
ATCCATGCTCAGATTATAAAAGATGGTTATGTAGACAATGTATTTGTGGGGAGTTCTCTC
GTTGAAATGTATTGTAAATGTGGGGATGTAGGTGCAGCCAGATATTATTTTGATATGATG
CCTGGTAAAAATATTGTTACTTGGAATGAAATGATACACGGTTATGCACATAATGGTTAT
GGTCTTGAAGCTGTATCCCTTTACAAGGACATGATTTCATCTGGTGAAAAACCTGATGAT
ATTACTTTTGTTGCTGTATTAACTGCTTGTAGCCACTCGGCATTGGTAGATGAAGGGGTT
GAAATATTCAGTTCAATGCTACAAAAATTCGAAGTGGTGCCAAAGTTGGATCATTATACT
TGCATCATAGATTGTCTAGGCCGAGTAGGGAGGTTTAATGAAGTGGAAGTTATTCTAGAT
ACCATGCCGTATAAAGATGACACAATTGTATGGGAGGTTGTGTTAAGCTCATGCCGTGTT
CATGCTAATGTGAGCTTAGCAAAAAGAGCAGCTGAGGAACTCCATCGACTGAACCCACGA
AATTCTGCGCCTTATGTGCTTCTTGCCAACATGTATTCTTCTATGGGAAGATGGGATGAT
GCACAAGTTGTTAGAGATCTTATGAGTGATAACCAGATACATAAGGATCCTGGTTATAGC
CGGAGTGAGTTCAAGTATGATGTGCAAAATAAGACGAGTTTTTTTGCCAACATGTATTCT
TGTTTCGGAAATTTGGATGATGCACAATTTGTTAGAGATCTTACGAGTGATAAACAGTTC
TATAAGGATCCCTCGCTTCACTATCCATTCTGTAAAACAAACAATAATGATGTATTGCTT
GGCTATAAACTCAACTATACAAGCTATACAGTGTGA

Peptide Sequence

PEP ID

Medtr5g008840.1
PEP Infomation

| pentatricopeptide (PPR) repeat protein | HC | chr5:1959596-1956593 | 20140818
Sequence

MEVKSLNLINLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAH
HVFDKIPHKNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQ
ALDTYDLMMVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALL
CMYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSV
SLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTG
DMDSAENVFENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLT
ACVKSGDVKVGRQIFDCMSSPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTT
LAIILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLS
ELDVVCWNSMIAGFSINSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQ
IHAQIIKDGYVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGKNIVTWNEMIHGYAHNGY
GLEAVSLYKDMISSGEKPDDITFVAVLTACSHSALVDEGVEIFSSMLQKFEVVPKLDHYT
CIIDCLGRVGRFNEVEVILDTMPYKDDTIVWEVVLSSCRVHANVSLAKRAAEELHRLNPR
NSAPYVLLANMYSSMGRWDDAQVVRDLMSDNQIHKDPGYSRSEFKYDVQNKTSFFANMYS
CFGNLDDAQFVRDLTSDKQFYKDPSLHYPFCKTNNNDVLLGYKLNYTSYTV*

Transcript Sequence

Gene sequence data has not been registered.