Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr5g008690.1
CDS Infomation

| PPR containing plant-like protein | HC | chr5:1878296-1873339 | 20140818
Sequence

ATGCGTACTTCTTTTCTACCTAAAAACCTTTCCTTATCCAAGCAACTTCAAAAGTGTATT
CCAAATTCATGGAAACAAAAACCCACAAAACCCTTTCACAAACCACTCATTTCTTCAAAT
AATTCACCATCATCGTCACTATCATCATCGTTTTCTATGGTTGGTGTTCTTATTGCATCC
CTCAAGGATTTCATCACCTATAATCACTTATCAAACGCATTCAAAACCTTCATTCACATA
CAACACCACCATGCTTCATCTTTTGACATTATCTTCCAACCCATTAAACATCTTCTATTG
GGTTGCACAAATCTCAAGTCTTTATCACAGGGTAAACAAATTCATGCTCATATTATCTCA
CTGGGTATTCATCAAAATCCAATCTTGGTTTCGAAGCTTATTAATTTCTATGCAAGTGTT
GATTTACTAGCTGATGCTCAAATTGTTGCTGAGTGTTCAAATAGTTTTGATCCTTTACAT
TGGAATATGGTTATTTCTTTGTATGTTAAGAATTGTTTGTTTGAGGATGCAATTTCTGTT
TATAGGAGAATGTTGAGTAAGGGTGTTATACCAGATGATTATACTTATCCGTCGGTTCTT
AAGGCTTGCGGGGAATTATTGGATTATGATAGTGGTGTGGCGGTTCATAAGGCTATTCAA
GAGAGTTCTATTAAGTGGAGTTTGTTTGTGCATAATGCATTGGTGTTTATGTATGGTAGG
TTTGGGAAGTTAGAGGTGGCTCGTGAATTGTTTGATATTATGCCAGCTAGAGATGATGTT
TCGTGGAATACTATGATTAGTTGTTATGCTTCTAGGGGTTTGTGGGATGAAGCGTTTCGG
TTATTTGGATGTATGCGAGAGGCAGGTATTGAAAGGAATATTATTATATGGAATACCATT
GCTGGAGGGTGCTTGCATACGGGAAATTTTAAAGGGGCGCTTAAGTTGTTTTCTCAAATG
AGAGCAGTGATTCAGTTGGACTCTGTTGCAATGGTTGTTGGATTGAATGCATGTTCGCAC
ATTGGAGCGGTTAAATTGGGAAAGGAGATTCATGGTCATGCTGTAAGAACTTGCTTTGAT
GTGTTTGACAACGTGAAAAACACATTAATTACAATGTATTCCAGGTGTAGAGATCTCAAT
CATGCATATTTGTTGTTTCGAAAAATTGATGAGAAAGGTTTGATCACATGGAATGCCATG
CTTTCTGGGTTTGCTCACATGGATCGATCTGAGGAAGTCTCCTTCCTTCTTAGAGAAATG
CTACGTGAGGGCGTTGAGCCTAATTATGTGACCATTGCAAGCATTCTTCCCCTTTGCGCT
CGAATAGCAAATCTACAACATGGTAAAGAGTTTCATTGCTACATGGTAAAGCGTGAAGAA
CAGTTCAAGGGCTATTTATTATTGTGGAACTCACTGGTGGAAATGTATTCAAGGTCTGGC
AAAGTTTTAGAAGCCAGGAAAGTCTTTGATTCATTAAGCAGGAAAGATGAAGTCACGTAT
ACTTCCATGATTATGGGATATGGTGTGAGTGGGGATGGAGAAACTGCTCTAAAATTATTT
GCAGAGATGCGCAGGCTCAATATTAAACCGGATCACGTAACAATGGTTGCAGTTCTAATA
GCATGTAGTCATTCTGGCCTTGTAGCACAAGGGCAAGTACTATTTAGAAAGATGATAGAA
GTCTATGGAATAGATCCTAGGGTTGAGCACTATTCATGCATGGTTGATCTCTTTGGAAGG
GCTGGTCTTCTTGACAAAGCAAAGGAGGTTATCACAGGGATGTCATGCAAGCCTACTTCG
GCAATATGGGCTACTCTTATAGGAGCTTGTAAAATCCATGGAAATACAGTGATTGGGGAA
TGGGCTGCAGGAAAGTTGCTGGAAATGAAGCCTGATCATTCAGGTTATTATTTGTTGATT
GCAAATATGTATGCAGCTGCTAACCGGTTGGACAAAGAAGCTGAAGCGAGGACTTATATG
AGGGATTCAGGTGCGAAAAGGACTCCTGGTTGTGCTTGGGTTGATGTTGGCAGGGAGCTT
TGTCCCTTTTTAGCTGGGGACACTTCCAACCCTCGTTCATGCGAGATCTCCCCCATGATG
AAAAGGTTGAATATACTCATGAAAGATGCTGGTTATGCACCTAGCGAAGGGGTTGTCTCA
TCTGAGGAAGATTTTGAGGAGTTGAGTATGATAGGGAATGAACTCATCAAAGATGCTGGT
TATGTACCAAGCGAAGGGGTTGTCTCATCTGAGGAAGATTTTGAGGAGTTGAGTATGATA
GGGAATGTAAGTTGA

Peptide Sequence

PEP ID

Medtr5g008690.1
PEP Infomation

| PPR containing plant-like protein | HC | chr5:1878296-1873339 | 20140818
Sequence

MRTSFLPKNLSLSKQLQKCIPNSWKQKPTKPFHKPLISSNNSPSSSLSSSFSMVGVLIAS
LKDFITYNHLSNAFKTFIHIQHHHASSFDIIFQPIKHLLLGCTNLKSLSQGKQIHAHIIS
LGIHQNPILVSKLINFYASVDLLADAQIVAECSNSFDPLHWNMVISLYVKNCLFEDAISV
YRRMLSKGVIPDDYTYPSVLKACGELLDYDSGVAVHKAIQESSIKWSLFVHNALVFMYGR
FGKLEVARELFDIMPARDDVSWNTMISCYASRGLWDEAFRLFGCMREAGIERNIIIWNTI
AGGCLHTGNFKGALKLFSQMRAVIQLDSVAMVVGLNACSHIGAVKLGKEIHGHAVRTCFD
VFDNVKNTLITMYSRCRDLNHAYLLFRKIDEKGLITWNAMLSGFAHMDRSEEVSFLLREM
LREGVEPNYVTIASILPLCARIANLQHGKEFHCYMVKREEQFKGYLLLWNSLVEMYSRSG
KVLEARKVFDSLSRKDEVTYTSMIMGYGVSGDGETALKLFAEMRRLNIKPDHVTMVAVLI
ACSHSGLVAQGQVLFRKMIEVYGIDPRVEHYSCMVDLFGRAGLLDKAKEVITGMSCKPTS
AIWATLIGACKIHGNTVIGEWAAGKLLEMKPDHSGYYLLIANMYAAANRLDKEAEARTYM
RDSGAKRTPGCAWVDVGRELCPFLAGDTSNPRSCEISPMMKRLNILMKDAGYAPSEGVVS
SEEDFEELSMIGNELIKDAGYVPSEGVVSSEEDFEELSMIGNVS*

Transcript Sequence

Gene sequence data has not been registered.