Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr4g130500.1
CDS Infomation

| pentatricopeptide (PPR) repeat protein | HC | chr4:54376407-54379381 | 20140818
Sequence

ATGATTCTCGGCAATAGCAGTGGCAAACTCAGCCGCAACACACTATTTTCCCTAATCAAC
AAAGCTTCAACATTTCCTCATCTTGCTCAAACCCACGCTCAATTCATTCTCAATGGTTAC
CGTTTCGACCTCGCCACCCTCACCAAACTCACTCAAAAACTCTTCGACTTCTCCGCCACG
CGCCACGCACGCGCCCTCTTCTTCTCTGTTCCCAAACCAGACATCTTCCTCTTCAATGTC
CTCGTTCGTGGCTTCTCCCTCAACGATTCACCTTCTTCTTCCATTTCTCTGTACACCCAT
TTACGTCGAAATACCAATCTTTCCCCTGATAACTTCACCTACGCTTTCGCCGTTGCCGCT
TGTTCTAATGATAAGCATTTGATGCTTCTGCATGCTCATTCTATTATTGATGGGTATGGT
TCTAATGTGTTTGTTGGTTCTGCTCTTGTTGACTTGTACTGCAAGTTTTCGAGAGTTGTG
TATGCAAGGAAAGTGTTTGATGGAATGCCTGAGAGAGATACTGTTTTGTGGAACACTATG
ATTAATGGGTTGGTTAAGAATTGTTGTTTTGATGATTCTATTCAGCTCTTTAGGGAAATG
GTTGCAGATGGGGTGAGGGTGGATTCGTCGACTGTTACTGCTGTGCTTCCTGCTGCTGCT
GAGTTGCAAGAGTTGAAAGTTGGGATGGGGATTCAGTGTTTGGCTTTGAAAATTGGGTTT
GGTTTTTGTGATTATGTGTTGACCGGTTTGATTTCCTTGTATTCTAAATGTGGGGATGTA
AACACGGCGAGGTTGTTGTTTAGGAGGATTAATAGGCCGGACTTGATAGCGTACAATGCG
ATGATTTCTGGGTTTACTGCCAATGGTGGGACTGAATGTTCTGTGAAGCTTTTCAGAGAG
CTGCTTTTTTCTGGTGAGAGAGTCAGTTCAAGTACAATTGTTGGTTTGATTCCACTGCAT
TCTCCATTTGGTCATCTGCATTTGGCTTGCTCTATTCATGGGTTTTGTGTGAAATCCGGT
ATTATTTTGAATCCGACCGTCTCAACTGCATTCACTGCTATATACAACAAACTTAATGAA
ATAGATTTGGCTCGCCATCTGTTTGATGAATCGCCAGAGAAAACCGTGGTGGCTTGGAAT
GCTATGATTTCGGGTTACACGCAAAATGGTTCGACAGAGACGGCTATCTCTCTTTTTAAG
GAAATGATGAAGACTGAATTCACTCCAAATGCAGTTACCATCACGACCATCCTTTCAGCT
TGTGCTCAACTAGGATCTTTAAGTTTTGGAAAATGGGTCCATCATTTGATTAAAAGCGAA
AATCTTGAGCCAAACATTTATGTCTCGACAGCTCTAGTTGACATGTACGCCAAGTGTGGG
AACATTTCGGAGGCTTGGCAATTATTTGATTCGATGAGTGAAAAGAATACTGTAACTTGG
AATACTATGATTTTTGGTTATGGGCTCCATGGATATGGGCATGAAGCACTTAAGCTTTAT
AATGAGATGTTACATTTAGGGTATAATCCATCTGCAGTCACTTTTCTTTCAGTCTTGTAT
GCTTGCAGCCATGCTGGCTTAGTAGGAGAAGGAGAGGAAATTTTTCATAATATGGTCAAT
AAATACAGGATTGAGCCCTTAATCGAGCACTATGCATGCATGGTGGACATTCTGGGACGA
TCTGGACAGTTAGAAAAAGCCTTAGAATTTATAAAGAAAATGCCTGTTGAGCCGGGTCCT
GCTGTCTGGGGTACATTGCTTGGTGCCTGCATGATTCACAAAGACACGGACATAGCCCGC
TTGGCTTCAGAAAGGCTATTTGAACTCGATCCAGGTAGCGTAGGATACTATGTCTTACTT
TCTAATATATACTCTGTGGAAAGAAACTTCCCAAAGGCTGCTTCAATACGACAAGTTGTT
AAGAAAAGAAAACTGGCAAAGAGTCCAGGGTGCACTCTAATTGAGGTTAATGGGACCCCC
CATGTCTTTGTATCTGGTGATCGTTCTCATTCTCATGCAACCGATATTTATGCAAAGCTG
GAGAAGTTAACGGGCAAGATGAGGGAGATGGGGTATCAGGCAGAAACAGTCCCTGCTTTA
CATGACGTGGAAGAAGAGGAAAAAGAACTCGCGGTGAATGTTCATAGTGAGAAGTTAGCC
ATAGCTTTTGGCCTTATCACCACTGAACCTGGTAATGAGATCAGGATCATCAAGAATCTT
CGGGTTTGTTTGGATTGCCACACTGCAACTAAGTTTATATCGAAGATCACTGAAAGAGTG
ATAGTGGTTAGGGATGCTAACAGATTCCACCATTTCAAAGATGGGATCTGTTCTTGTGGC
GATTATTGGTGA

Peptide Sequence

PEP ID

Medtr4g130500.1
PEP Infomation

| pentatricopeptide (PPR) repeat protein | HC | chr4:54376407-54379381 | 20140818
Sequence

MILGNSSGKLSRNTLFSLINKASTFPHLAQTHAQFILNGYRFDLATLTKLTQKLFDFSAT
RHARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAA
CSNDKHLMLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTM
INGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGF
GFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRE
LLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNE
IDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSA
CAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTW
NTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVN
KYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIAR
LASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTP
HVFVSGDRSHSHATDIYAKLEKLTGKMREMGYQAETVPALHDVEEEEKELAVNVHSEKLA
IAFGLITTEPGNEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKDGICSCG
DYW*

Transcript Sequence

Gene sequence data has not been registered.