Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr4g121890.1
CDS Infomation

| component of IIS longevity pathway SMK-1 domain protein | HC | chr4:50305352-50323275 | 20140818
Sequence

ATGGGAGCGCCAGAGAAATCTCAAACCAACGCTAGTTCCATGCAGCGTGTCAAGGTGTAC
CGTCTGAATGATGATGGAAAATGGGATGACCAGGGTACAGGGCATGTAACTATTGATTAT
TTGGAGCGATCAGAGGATCTGGGCTTATTTGTTTATGACGAAGAAGACAACGAGACCATA
CTTTTGCATCGCATCAGTGCTGATGATATTTATAGGAAGCAAGAAGATTCAATTATCTCA
TGGAGAGATCCCGAATATGCCACAGAATTGGCACTCAGCTTTCAAGAGCCTAGCGGATGC
TCTTACATATGGGACCATATTTGCAATGTGCAGAGGAATATGCAATTCAATACTTTAAAT
AATGAGTCATTTCAGAGCACCAACAGTGAGTTAAGGGAGTTGCCTGCTGTTGAACTAACA
ACACTCCCATTGATTCTTAAGACCGTTGTTGACAGCAGCATTTCAGATCAAATACGACTA
ACAGAGCTACTATCAAGTAATCAAGAATTTTTTCGAAAGCTGATGGGGTTATTTAGAGTC
TGTGAAGACTTGGAAAACATGGATGGCCTTCACATGATTTTCAAAATCGTCAAAGGGATC
ATTTTACTTAATAGTCCAACAATTCTTGAGAGAATTTTTAAGGAAGAGTTTATAGTGGAC
ATCATCGGTGCCCTTGAGTATGATCCGGACATTACTTGTGTTCAGCATCATCGTAAATTC
TTAAAGGACCATGTTGTTTTTAAGGAGGCTATACCTATAAAAGATCCCAATGCACTAGCG
AAGATACATCAGACATATAGAGTTGGTTATTTGAAGGATGTTGTTTTGGCCAGAGTCTTA
GATGACGCTACTTGTGCAACCGTTAACTCCATAATACATGCAAACAATGCCTTTGTTATT
GCTATGTTGAAGGATGACAATACATTTATCCAGGAGTTGTTTGCTAGGTTAAAATCTCCC
ACAACCTCTCAAGAATCAAAAAAGAACTTGGTCCATTTCTTGTATGAGTTTTGTAGTGTA
AGCAAGAGCTTGCAGATGGTCCAGCAGCTTCGGCTATTTAGGGATCTGACAAATGAAGGC
ATCTTTGACATTGTCAGTGAAGTTTTGCAAAGTCAAGACAAGAAACTTGTGCTAACTGGA
ACAGACATCCTCCTTCTTTTTATGAATCAGGATCCTAATCTTCTGCGGTCATATGTTGTT
CGGCAGGAAGGAATTGCTCTTCTAGGACTCTTGGTTAAGGGAATGGTAACAGACTTTGGA
GAGAGCATGCACTGCCAGTTTCTTGAGATTCTTCGTATTCTATTGGACTCGAGCACATTG
TCTGGACCACAGAGGGACGCTATCATTGACATCTTCTTTGAGAAGCATTTGGGTCATTTG
ATTGAGGTTATAACAGCGTCATGTCCTTCAGAAAATACTGCCGGTGCTAGTAAATCAATA
GGTCCTGGACAAAGTGTTCAATTTCAGCGCAGAACAAAATCGGAGATATTATCAAATATA
TGTGAATTACTATGCTTTTGTGTCCTCCATCACCCATACAGGATAAAGTGCAATTTTCTT
CTCAATGATGCAATTGAAAATGTTCTGCTATTGACACGGAGAGCAGAAAGATACTTAGTA
GTTTGTGCTGTCCGGTTTGTTCGAACTGTTCTCTCCCGCAATGATGAGCATATGATAAAT
TATTTCGTTAGGAATAACATTCTCAAACCAATTATAGACGCCTTTGTTGCTAATGGCAAT
CGCTATAATCTTCTCAATTCTGCTGTTCTGGAACTTTTTGAGTATATTCGGAAGGAGAAT
AACCTGAAATTATTGCTAAAACACCTAGTTGATTCTTTTTGGGATCAACTGGTAAAGTTT
GAGCATTTGGTTTCAATTCGCTCGCTGAAAGTAAAATATGAGCAGTGTGTGGATAATGGT
GGGAACAACGCTGGTGCGGTAATGGACCTTAGAAGAAGAATTGATGAGCGTGCTGTAGAG
AGAGAAGAAGAAGAACGTTACTTTAATGAGGACAGTGATGAGGAGGATGCAGCATCTCCA
TCTGTTTCACGTGATCATAAAGGTCATCAACAACCTATTGTTTCCAATGGAGTTACTTCA
AACCATCCGCAGCCAAGTCGAACGTCACTGGTTGACTATGAAGATGATGAGGATGATGAA
GATTATAAACCACCACCAAGAAAGCAGAAAGAAGCATCAGAGGAAGATGAAGGGATAATG
GAGTCTCTCAGGCTGAAAAGAAAACTTCCTTCACAGGACAGAGAGCCCGAACTTGTGAAG
AAGCAGAAGTTAACAAAGAATTCAAAATCTAAAGATAGTGTCTTTGCTGCCTTGTGTTCA
ACCTTGAGCCAAGCTGTGCTACCTAATAAGAAGTCTGCAATCAATATTCATACGGGTGCT
CGAAGAGTTGAAGGGAGGGTGAGTTCTAGTGAAGACAATCAGGAAGACAGACAAAATGTT
TCTAGAAGTGGCTCTGATAATAGCAACACAGGGGCTGAGGATAACCATGTAGAGAAAGAT
ACTTCAGCCTCTAGAAGCATTTCTGATTGTTTGCATGCAAAATCAGATAACATACAATTG
GGGGGCGAGGAACGTCCACTGGTCCCCCCTAAATCCTCGCCAGAGATGGCAGTAAATGGA
TCATAG

Peptide Sequence

PEP ID

Medtr4g121890.1
PEP Infomation

| component of IIS longevity pathway SMK-1 domain protein | HC | chr4:50305352-50323275 | 20140818
Sequence

MGAPEKSQTNASSMQRVKVYRLNDDGKWDDQGTGHVTIDYLERSEDLGLFVYDEEDNETI
LLHRISADDIYRKQEDSIISWRDPEYATELALSFQEPSGCSYIWDHICNVQRNMQFNTLN
NESFQSTNSELRELPAVELTTLPLILKTVVDSSISDQIRLTELLSSNQEFFRKLMGLFRV
CEDLENMDGLHMIFKIVKGIILLNSPTILERIFKEEFIVDIIGALEYDPDITCVQHHRKF
LKDHVVFKEAIPIKDPNALAKIHQTYRVGYLKDVVLARVLDDATCATVNSIIHANNAFVI
AMLKDDNTFIQELFARLKSPTTSQESKKNLVHFLYEFCSVSKSLQMVQQLRLFRDLTNEG
IFDIVSEVLQSQDKKLVLTGTDILLLFMNQDPNLLRSYVVRQEGIALLGLLVKGMVTDFG
ESMHCQFLEILRILLDSSTLSGPQRDAIIDIFFEKHLGHLIEVITASCPSENTAGASKSI
GPGQSVQFQRRTKSEILSNICELLCFCVLHHPYRIKCNFLLNDAIENVLLLTRRAERYLV
VCAVRFVRTVLSRNDEHMINYFVRNNILKPIIDAFVANGNRYNLLNSAVLELFEYIRKEN
NLKLLLKHLVDSFWDQLVKFEHLVSIRSLKVKYEQCVDNGGNNAGAVMDLRRRIDERAVE
REEEERYFNEDSDEEDAASPSVSRDHKGHQQPIVSNGVTSNHPQPSRTSLVDYEDDEDDE
DYKPPPRKQKEASEEDEGIMESLRLKRKLPSQDREPELVKKQKLTKNSKSKDSVFAALCS
TLSQAVLPNKKSAINIHTGARRVEGRVSSSEDNQEDRQNVSRSGSDNSNTGAEDNHVEKD
TSASRSISDCLHAKSDNIQLGGEERPLVPPKSSPEMAVNGS*

Transcript Sequence

Gene sequence data has not been registered.