Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr4g080070.1
CDS Infomation

| disease resistance protein (TIR-NBS-LRR class) | LC | chr4:31030746-31026947 | 20140818
Sequence

ATGGCTAGCAGCAGCAACTCCTCTTCTTCAGCTCTTATGGCATTGCCAAGGAGGAAGAAT
TATTATGATGTGTTTGTCACCTTTAGAGGCGAAGATACTCGCTTCAACTTCATTGATCAT
CTTTTTGCTGCCCTTCAAAGAAAAGGCATTTTTGCATTTAGAGACGACACTAATCTTCAA
AAAGGTGAATCCATACCACCCGAGCTCATTCGTGCAATTGAAGGGTCTCAGGTTTTCATT
GCGGTCCTCTCCAAAAACTATGCTTCCTCAACTTGGTGCTTGCGAGAATTGGTACACATC
CTTGACTGCAGTCAAGTTTCTGGAAGACGTGTTCTTCCTGTTTTTTATGATGTTGATCCT
TCTGAGGTGAGACATCAAAAAGGAATTTACGGTGAAGCCTTTTCCAAACATGAACAAACA
TTCCAACATGAATCTCATGTGGTACAAAGTTGGAGGGAAGCTCTGACACAAGTGGGGAAT
ATCTCTGGCTGGGATCTTCGTGATAAGCCTCAATATGCTGAGATTAAAAAGATTGTTGAA
GAGATATTGAATATATTGGGTCACAACTTTTCATCTCTTCCAAAAGAACTAGTTGGTATG
AATCCTCATATAGAAAAAGTAGTAAATCTATTACTTTTGGACTCGGTTGATGATGTTCGG
GTTGTAGGAATTTGTGGGATGGGTGGAATAGGGAAGACAACTCTGACTACTGCTTTATAT
GGTCAAATCTCTCATCAATTTGATGCACGTTGTTTTATTGATGATCTAAGCAAAATATAT
AGACATGATGGTCAAGTTGGTGCACAAAAGCAAATTCTACACCAAACTTTTGGCAAGGAA
CACTTTCAGATATGCAATCTCTTTGACACGGATGATTTGATACGACGTAGGTTACGTCGG
CTACGAGCACTTATCATTCTCGATAATGTTGATAAAGTTGAACAGCTCGATAAGTTAGCT
TTAAATCGTGAATATTTAGGTGCAGGGAGTAGAATCATTATAATTTCTAGAGATGAGCAT
ATCTTGAATGAGTATGGAGTTGATGAAGTTTACAAAGTTCCACTCTTGAATGAGACCAAC
TCTCTTCAATTATTTTGTCAAAAAGCTTTCAAACTTGAGCATGTTATGAGTGGTTATGAT
AAAATGGCACTTGACACACTATCTTATGCCAATGGCCTACCACTAGCTATTAAAGTATTG
GGCTCATTTTTGTTTGGTCGAGATATCTCTGAATGGAGAAGTAAATTGGCTAGATTGAGA
GAATGTCCAATCAAAGATATTATGGATGTGTTGCGATTAAGTTTTGAAGGGCTAGAGAAT
ATGGAAAAAGATATATTTCTTGATATTGCTTGTTTTTTCAAAGGGTACAACAAGGAATGT
GTTACAAATATTCTAAATTGTCGTGGGTTTCATGCTGATATCGGATTAAGAATTCTCATT
GATAAATCCCTTATAAGCATTTCTTACGGAACTAATATTACAATGCATAGTTTGTTGGTA
GAGTTGGGCCGGAAAATTGTTCAAGAAAATTCGACCAAAGACTTGAGAAAGTGGAGCAGG
TTGTGGTCCCTCGAACATTTCAACAATGTAATGTTGGAGAATATGGAAAAGAATGTTGAA
GCCGTAGTTATTTGTCATCCAAGACAAATAAAAACATTGGTGGCGGAAACATTGTCAAGT
ATGAGTCATCTTAGATTACTTATATTTGACAGGGGTGTGTATATTTCAGGAAGCCTGAAT
TATCTTTCAAATGAATTGAGATATTTTAAGTGGACATGCTATCCTTTCATGTGTTTGCCA
AAAAGTTTTCAGCCCAACCAGCTTGTTGAACTTTATTTGTGGCGTAGCAGCATCCAACAA
CTATGGGAAGGCAAGAAGTATCTGCCCAATTTGAAAACTATGGATCTGATGTACTCCAAA
CACCTAATCAAGATGCCAAATTTTGGAGAGGTTCCAAATCTTGAGCGGCTGAATCTCGAC
GGATGTGTAAATCTTGTGCAAATAGATCCATCTATTGGTCTTCTGAGAAAGCTTGTATTC
TTGAACTTGAAAAATTGCAAAAATCTAATAAGCATACCTAACAACATATTTGGTCTCACC
TCTCTTAAATATCTAAATCTTTCCTGGTGTTCCAAAGTGTTTACCAATACAAGGCATTTG
AATAAACTTGATTCGAGTGAAATTGTATTACATTCCCAGTCAACAACTTCCTCCTTGTAT
CATAATGCAGACAAAGGTTTAGTTAGTCGTTTGTTGTCATCCTTGCTTAGCTTTTCCTTT
TTGTGGGAACTTGATATTAGTTTTTGTGGTCTGAGCCAAATGCCAGATGCAATTGGATGT
ATACCATGGCTAGGAAGATTAATTTTAATGGGAAACAATTTTGTGACTCTGCCTAGTTTC
AGGGAGCTTTCTAATCTGGTATATTTAGACTTACAGCACTGCAAGCAATTGAAATTTTTG
CCTGAGCTCCCTTTGCCTCACTCTTCACCTTCTGTTATCAAGTGGGATGAATATTGGAAG
AAGTGGGGATTGTATATTTTCAACTGTCCTGAATTGGGGGAGAAGGATCAATATAGTAGC
ATGACTTTATTATGGTTGATACAATTTGTTCAGGCTAACCAAGAATCTCTTGCCTGCTTT
CGTGGGACTATTGGTATCGTTATTCCTGGAAGTGAAATACCAAGCTGGTTGAACAACCAG
TGCGTAGGTAAATCAACACGCATAGACTTATCTCCTACTTTGCATGACAGTAATTTCATT
GGCCTTGCTTGTTGTGTCGTATTTTCTGTGACATTTGATGATCCAACTATGACAACAAAG
GAATTCGGACCAGACATATCGCTAGTTTTTGATTGTCATACTGCTACACTTGAATTTATG
TGTCCGGTAATTTTTTATGGAGATCTTATTACACTCGAATCAAACCACACATGGCTAATA
TATGTCCCTAGGGATTCTCTGAGCTATCAGAACAAAGCATTCAAAGATGTTGATCATATC
ACAATGACAGCTTGCCTTGAGGACGGAAACGGGTTGCATGTGGATGTGAAAACATGTGGG
TATCGTTATGTATTCAAACAGGATCTAAAACAGTTTAACTCAACAGTGATGCACCACAGA
AATCCGTTTGCACAGAAGCGCAAGTTTTTGGCAATTGAAGATTAG

Peptide Sequence

PEP ID

Medtr4g080070.1
PEP Infomation

| disease resistance protein (TIR-NBS-LRR class) | LC | chr4:31030746-31026947 | 20140818
Sequence

MASSSNSSSSALMALPRRKNYYDVFVTFRGEDTRFNFIDHLFAALQRKGIFAFRDDTNLQ
KGESIPPELIRAIEGSQVFIAVLSKNYASSTWCLRELVHILDCSQVSGRRVLPVFYDVDP
SEVRHQKGIYGEAFSKHEQTFQHESHVVQSWREALTQVGNISGWDLRDKPQYAEIKKIVE
EILNILGHNFSSLPKELVGMNPHIEKVVNLLLLDSVDDVRVVGICGMGGIGKTTLTTALY
GQISHQFDARCFIDDLSKIYRHDGQVGAQKQILHQTFGKEHFQICNLFDTDDLIRRRLRR
LRALIILDNVDKVEQLDKLALNREYLGAGSRIIIISRDEHILNEYGVDEVYKVPLLNETN
SLQLFCQKAFKLEHVMSGYDKMALDTLSYANGLPLAIKVLGSFLFGRDISEWRSKLARLR
ECPIKDIMDVLRLSFEGLENMEKDIFLDIACFFKGYNKECVTNILNCRGFHADIGLRILI
DKSLISISYGTNITMHSLLVELGRKIVQENSTKDLRKWSRLWSLEHFNNVMLENMEKNVE
AVVICHPRQIKTLVAETLSSMSHLRLLIFDRGVYISGSLNYLSNELRYFKWTCYPFMCLP
KSFQPNQLVELYLWRSSIQQLWEGKKYLPNLKTMDLMYSKHLIKMPNFGEVPNLERLNLD
GCVNLVQIDPSIGLLRKLVFLNLKNCKNLISIPNNIFGLTSLKYLNLSWCSKVFTNTRHL
NKLDSSEIVLHSQSTTSSLYHNADKGLVSRLLSSLLSFSFLWELDISFCGLSQMPDAIGC
IPWLGRLILMGNNFVTLPSFRELSNLVYLDLQHCKQLKFLPELPLPHSSPSVIKWDEYWK
KWGLYIFNCPELGEKDQYSSMTLLWLIQFVQANQESLACFRGTIGIVIPGSEIPSWLNNQ
CVGKSTRIDLSPTLHDSNFIGLACCVVFSVTFDDPTMTTKEFGPDISLVFDCHTATLEFM
CPVIFYGDLITLESNHTWLIYVPRDSLSYQNKAFKDVDHITMTACLEDGNGLHVDVKTCG
YRYVFKQDLKQFNSTVMHHRNPFAQKRKFLAIED*

Transcript Sequence

Gene sequence data has not been registered.