Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr4g078640.1
CDS Infomation

| adoMet-dependent rRNA methyltransferase Spb1 | HC | chr4:30378623-30372127 | 20140818
Sequence

ATGGGTAAAGCAAAAGCAAAAGGAAAACATCGTTTAGACAAATACTACTACTTAGCCAAA
GAACACGGTTACTGTTCTCGTGCATCATGGAAACTCGTTCAAATCAATTCCAAATTCCAT
TTCCTCGAATCCTCACGCTCCGTTCTCGATCTCTGCGCCGCTCCTGGTGGTTGGATGCAA
GTCGCCGTCCAACGTGTTCCCGTCGATCATCTCGTCATCGGAGTCGATCTCACTCCGATT
AAACCAATTCGAGGCGCGATTGCTATTCAGGAAGATATTACTAGACCTGAATGTAAATCT
AGAGTTAGGAAAATTATGAATGAAAATGGTTACCGTGCTTTTGATGTTATTCTTCATGAT
GGTTCACCGAATGTTGGTGGTGCTTGGGCTCAAGAAGCTACTAGTCAGAATTCGCTTGTT
ATTGATGCTATTAAGCTTGCTACTCAGTTTTTAGCTCCTAAGGGAACTTTTGTTACCAAG
GTTTTCAGGTCTCAGGATTACAATTCTGTGGTGTGGTGTATGAAGAAGTTGTTTGAGAAG
GTTGAGGTGGAAAAACCACCGGCTAGTCGTTCTGAATCTGCCGAGATATATATTTTGGGG
ATTAAGTATTTAGCCCCTGCTAAGATTGATCCTCGCATTCTCGATATCAAGCATCTTTTT
GAGGCTTCTGCACAACCAATAGCTAAGATGGTGGATGTACTTGGAAACAATAAGCAAAAG
AGGCATCGTGATGGGTATGAAGATGGAAACACAACTTTGAGGAAGGTGTCTTCAGCTGCA
AATTTTGTTTGGACAGATGCTCCTCTGGAGATTCTTGGTTCAGTTACTTCCATAAGCTTT
ACCGATCCAGCTGATATACCAATCAAGGATCACGACCTAACAACTGAAGAGGTAAAATCT
CTCTGTGAAGATTTGAGGGTTTTGGGGAAGCAAGACTTCAAGCATCTTCTAAAGTGGCGG
ATTAACATTAGAAAAGCTCTATCACCTGCTAAAAAGACCGAACCTGCTACTACAGCTGAG
GTGGAAAATGAGCATGATGTGGTGGATGAAGATGATAGATTACTCAACGAAATGGAGGAA
TTGACAAATGCAATGGACCGCAAGAAGAAGCGTGAAAAAAAGATTCTATCAAAAAGAAGG
GCCAAGGACAAGGCTCGGAAAGCAACAGGGATGCAAGTGGATGCAGTAGAAGATTATGTT
GACCATGAGTTGTTTTCCCTTGCTTCTATGAAGGGTAAGAAGGATCTGGTAGCTGTTGAC
ACCACTGACTATGAAGGTGGTGAGGGTGAAGTGGATGACAGTGAGAATGATGAAAACAAA
GGTGGCTCGGAGCATTCATCTAGTGACTTAGATTCTGACGAAGAACGTAGAAGATATGAT
GAACAAATGGAGGATTTACTTGAACAAGCTTATGAGCGGTTTGTGATAAAAAAGGAAGGG
ACTGCACAGCAGCGTAAGCGTATCAAGAAATCCTACGATGCAGACTCCCAACTTTTGGAG
GCTGGTGAAGATGATGACATTGTTCCGTCCAAATATGATTCAGATGACGATCAGGATGTT
CAAGAAGCAAATCCTTTGATGGTGCCACTTACTGATGGTACAGGGCCCACCCAAGAGGAG
ATCACAAATATGTGGTTTAGTCAGGATGTCTTTGCTGAAGCTGTAGAGGAAGGAGGCTTT
GAGAAGGATGACAGTGAGAATGAAATGGATATCGATGGGCTGAAGGAGAAGCCGTTTGTT
GCGGAAAAGATCAAAGAAAATAAGCCTGTTGCTGAAAAAATCAAAGAAAATAAGTCTGTT
GCTGAAAAGATCAAAGAAAATAAAATGACTACTTCTGTCGAGGCAGATCGCACTCAATCA
CAAGTATCCAATGAAATGGATTTTGAGATTGTTCCTGCACCTGCTACTGATTCCGATGAT
TCGTCCTCTGATGAGTCGGAGGATGATGTTGGAAAAAAAGCTGAGATACTGGCTTATGCT
AAGAAGATGCTGAGGAAAAAGCAAAGGGAACAGATGCTAGATGATGCATATAATAAATAC
ATGTTTGATGACCAGGGATTGCCCAAGTGGTTTCTCGATGAGGAAAGAAAACACCGTGTA
CCAGTTAAGCCTGTCACAAAAGAGGAAGTTGCTGCTATGAAGGCACAATTTAAAGCAATT
GATACTAGACCTGCAAAGAAGGTGGCTGAGGCCAAAGCACGAAAGAAGCGTGTTGCAATG
AGGAAGATTGAGAAAGTCCGCAAGAAGGCCAACGCTATATCAGATCAGCCAGACATATCT
GATCGTTCCAAGAGTAAGCAAATTGACCGACTCTATAAAAACGCAGTTCCAAAAAGGCCT
CAAAAGGAGTATGTAACTGCAAAGAAAGGTGTCCAAGTTAAGGCTGGTAAGGGAAAAGTC
CTTGTTGATCGCAGGATGAAGAGTGATGCGAGGAAAAGTGGTATGGGTAAGGGAGGCAAA
AGAGGTTCCAAGGCAAAGGGCGGCAAGGCACCAAAGGGCGGCAAGGCACCAAAGGGTGGC
AGGGCTCCAAGTGGCAAGGCTCCTATGGGTGGTGGCAAGGCACCAAAGGGTAGCAGGGCT
CCGAGCGGCAAGAAGGGAAGGAAATAA

Peptide Sequence

PEP ID

Medtr4g078640.1
PEP Infomation

| adoMet-dependent rRNA methyltransferase Spb1 | HC | chr4:30378623-30372127 | 20140818
Sequence

MGKAKAKGKHRLDKYYYLAKEHGYCSRASWKLVQINSKFHFLESSRSVLDLCAAPGGWMQ
VAVQRVPVDHLVIGVDLTPIKPIRGAIAIQEDITRPECKSRVRKIMNENGYRAFDVILHD
GSPNVGGAWAQEATSQNSLVIDAIKLATQFLAPKGTFVTKVFRSQDYNSVVWCMKKLFEK
VEVEKPPASRSESAEIYILGIKYLAPAKIDPRILDIKHLFEASAQPIAKMVDVLGNNKQK
RHRDGYEDGNTTLRKVSSAANFVWTDAPLEILGSVTSISFTDPADIPIKDHDLTTEEVKS
LCEDLRVLGKQDFKHLLKWRINIRKALSPAKKTEPATTAEVENEHDVVDEDDRLLNEMEE
LTNAMDRKKKREKKILSKRRAKDKARKATGMQVDAVEDYVDHELFSLASMKGKKDLVAVD
TTDYEGGEGEVDDSENDENKGGSEHSSSDLDSDEERRRYDEQMEDLLEQAYERFVIKKEG
TAQQRKRIKKSYDADSQLLEAGEDDDIVPSKYDSDDDQDVQEANPLMVPLTDGTGPTQEE
ITNMWFSQDVFAEAVEEGGFEKDDSENEMDIDGLKEKPFVAEKIKENKPVAEKIKENKSV
AEKIKENKMTTSVEADRTQSQVSNEMDFEIVPAPATDSDDSSSDESEDDVGKKAEILAYA
KKMLRKKQREQMLDDAYNKYMFDDQGLPKWFLDEERKHRVPVKPVTKEEVAAMKAQFKAI
DTRPAKKVAEAKARKKRVAMRKIEKVRKKANAISDQPDISDRSKSKQIDRLYKNAVPKRP
QKEYVTAKKGVQVKAGKGKVLVDRRMKSDARKSGMGKGGKRGSKAKGGKAPKGGKAPKGG
RAPSGKAPMGGGKAPKGSRAPSGKKGRK*

Transcript Sequence

Gene sequence data has not been registered.