Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr3g107740.2
CDS Infomation

| 1-deoxy-D-xylulose-5-phosphate synthase | HC | chr3:49718014-49711963 | 20140818
Sequence

ATGATGGGTACTGTTTGTGCTAGATACCCATTTGTAATCCCTTTCCATTCCCAAACCCTA
ACTCGCAGATTGGATTGCTCAATCTCCCAATTCCCCCTTTCCAGAATCACATATTCTTCT
TCTTCTAGAATCTTAATTCATCGAGTATGTTCACGACCTGATATTGATGATTTCTACTGG
GAGAAAGTTCCAACACCCATTCTTGACACAGTTCAAAACCCTCTTTGCTTGAAGAACCTT
TCTCAGCAAGAGTTGAAACAACTAGCTGCTGAAATCCGTTTAGAGTTGTCTTCTATTTTG
TCGGGCACGCAAATATTACTGAATCCTAGTATGGCTGTGGTGGACCTCACAGTTGCAATA
CATCATGTTTTTCATGCTCCAGTTGACAAGATTTTGTGGGATGTCGGTGATCAAACATAT
GCGCATAAGATACTTACAGGACGGAGATCGCTCATGAAGACAATAAGAAAAAAGAATGGT
CTTTCTGGTTTTACTTCTCGATTTGAGAGTGAATACGATGCATTTGGTGCTGGTCATGGA
TGCAACAGTATTTCTGCCGGACTTGGAATGGCTGTTGCGAGGGATATTAAAGGGAGACGA
GAACGTGTAGTTGCAGTTATCAGCAATTGGACAACTATGTCTGGCCAGGTCTATGAGGCA
ATGAGCAATGCAGGTTATTTGGACTCAAATTTGGTGGTGATTTTGAACGATAGCCGCCAC
TCTTTACTCCCAAAAATTGAGGACGGCTCGAAAACCTCTGTCAATGCTCTATCCAGTACC
CTTAGCAGGCTCCAATCCAGTAAATCTTTCCGAAAATTTAGAGAAGCTGCTAAGGGTGTT
ACAAAACGTATTGGCAGAGGCATGCATGAATTAGCAGCTAAAGTTGATGAATATGCTCGT
GGTATGATGGGTCCACCAGGTTCTACTCTATTTGAAGAGCTTGGGTTGTATTACATAGGC
CCAGTGGATGGACACAATATCGAAGATCTGATAAGTGTTCTTCAAGAAGTAGCTTCCCTG
GATTCAATGGGCCCTGTCTTGATTCATGTTATAACTAATGAAAATCAGGTTGAAGAACAC
AATAAAAAAAGTTACATGACAGACAAGCAGCAGGATGAATCGGTTAGTTTTGATTTGTTA
GACAATGCTGGTCGGCTTCAAACATATGGTGATTGCTTTGTGGAGAGTTTGGTAGCCGAA
GCTGAGAAAGACAAAGATATTGTGGTTGTTCATGCAGGAATCACGACAGAGCCATCGCTT
AAACTGTTTATGGAAAAATTTCCAGATAGGATTTTTAATGTGGGAATTGCTGAGCAACAC
GCTGTCACATTTGCTTCTGGTTTATCATGTGGTGGATTGAAGCCATTTTGCATTATACCT
TCTTCCTTTTTACAGAGAGCCTATGACCAGGTGGTTCACGATGTTGATCAACAGAAAGTT
CCAGTGCGTTTTGTCATTACAAGTGCAGGATTGGTAGGTTCAGATGGTCCCCTCCAGTGT
GGAGCATTTGATATAACGTTCATGTCATGCTTACCAAATATGATTGTCATGGCACCATCT
GATGAGGCTGAACTTGTGCACATGGTGGCGACTGCTGCTCATATCAATGACCAACCAGTT
TGCTTTCGGTATCCTAGGGGTGCCTTGGTTGGGAAAGACGAAGCTATACTTGATGGAATT
CCAATTGAGGTAATTGAGCAACGCTGTTTTCTTGATAAACTTTAG

Peptide Sequence

PEP ID

Medtr3g107740.2
PEP Infomation

| 1-deoxy-D-xylulose-5-phosphate synthase | HC | chr3:49718014-49711963 | 20140818
Sequence

MMGTVCARYPFVIPFHSQTLTRRLDCSISQFPLSRITYSSSSRILIHRVCSRPDIDDFYW
EKVPTPILDTVQNPLCLKNLSQQELKQLAAEIRLELSSILSGTQILLNPSMAVVDLTVAI
HHVFHAPVDKILWDVGDQTYAHKILTGRRSLMKTIRKKNGLSGFTSRFESEYDAFGAGHG
CNSISAGLGMAVARDIKGRRERVVAVISNWTTMSGQVYEAMSNAGYLDSNLVVILNDSRH
SLLPKIEDGSKTSVNALSSTLSRLQSSKSFRKFREAAKGVTKRIGRGMHELAAKVDEYAR
GMMGPPGSTLFEELGLYYIGPVDGHNIEDLISVLQEVASLDSMGPVLIHVITNENQVEEH
NKKSYMTDKQQDESVSFDLLDNAGRLQTYGDCFVESLVAEAEKDKDIVVVHAGITTEPSL
KLFMEKFPDRIFNVGIAEQHAVTFASGLSCGGLKPFCIIPSSFLQRAYDQVVHDVDQQKV
PVRFVITSAGLVGSDGPLQCGAFDITFMSCLPNMIVMAPSDEAELVHMVATAAHINDQPV
CFRYPRGALVGKDEAILDGIPIEVIEQRCFLDKL*

Transcript Sequence

Gene sequence data has not been registered.