Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr3g102830.1
CDS Infomation

| ATP-dependent Clp protease ATP-binding subunit | HC | chr3:47377876-47383774 | 20140818
Sequence

ATGTCTAGGGTTTTGGCACAGTCGATTAATGTCCCCGGCCTAGTGGCTGGTCGAAGGCAT
GTCAATAACAACAATGGATCCGTGAGATCAAGACCTAGGTCTGTCAGAATGATGTATGCT
ACACAAACTGCTACAATGCGACTGTCTGGTTTCTCTGGATTACGTCCTTTGAACTCTTTG
GATTCTATGTTTAGACCCAGACAAGATTTTCATTCTAAGGTGCTCACTCAGATTGGTACT
AATAGAGCAAGGGGTGGTAGAGGTAGCAGATGTGTAACTAGAGCCATGTTTGAGCGTTTC
ACGGAGAAAGCAATCAAAGTTATTATGCTGGCTCAAGAGGAAGCTAGGCGGCTTGGTCAC
AATTTTGTCGGAACAGAACAAATTTTGTTGGGTCTTATTGGTGAAGGCACTGGTATTGGT
GCTAAGGTTCTAAAGTCTATGGGAATTAACCTGAAAGACTCTCGCGTGGAAGTTGAAAAG
ATAATTGGAAGGGGTAGCGGTTTTGTTGCTGTTGAGATTCCGTTTACTCCGCGTGCCAAG
AGAGTTTTGGAACTCTCATTGGAGGAAGCTCGCCAACTTGGTCACAATTATATCGGATCT
GAGCACCTGCTTTTGGGTCTTCTTCGAGAGGGTGAGGGTGTGGCCGCACGTGTTCTTGAA
AATTTGGGTGCTGATCCAACTAATATTCGCACCCAGGTTATTCGCATGGTTGGTGAGGGT
GCTGACAATGTTGGGGCTACTGTTGGCTCTGGAAGTAGTAATAGCAAGATGCCAACTTTG
GAGGAGTATGGCACCAATTTGACCAAGCTAGCAGAGGAGGGAAAATTGGATCCTGTTGTG
GGTAGGCAGCCACAAATTGAACGTGTTACTCAAATCTTGGGTCGTCGCACCAAAAATAAT
CCTTGTCTTATTGGGGAACCTGGTGTCGGAAAGACAGCTATTGCTGAAGGTCTCGCCCAA
CGGATTGCAAATGGTGATGTCCCTGAAACCATAGAGGGAAAGCAGGTTATAACCCTGGAT
ATGGGTCTACTTGTTGCTGGAACTAAATATCGTGGAGAATTTGAGGAGAGATTGAAAAAA
CTAATGGAGGAAATTAAACAAAGTGATGAAATAATACTTTTCATTGATGAAGTGCACACT
CTCATTGGAGCAGGAGCAGCTGAAGGGGCAATTGATGCGGCAAACATATTGAAACCAGCT
CTTGCTAGAGGTGAACTACAGTGTATAGGAGCCACAACACTAGATGAATACAGGAAGCAC
ATTGAAAAAGATCCAGCTTTGGAGAGGAGATTCCAGCCAGTTAAAGTGCCAGAGCCAACT
GTGAGTGAAACCATACAAATATTGAAAGGGCTTAGAGAGCGCTATGAGATTCACCACAAG
CTCCGTTATACCGATGATGCTCTTGTAGCTGCTGCAGAGCTGTCATATCAATATATCAGT
GATCGATTTTTGCCTGACAAAGCTATAGATTTGATTGATGAAGCTGGTTCCCGAGTTCGA
CTTCAACATGCACAGTTACCTGAAGAAGCAAGAGGGCTTGAAAAGGAGGTTAGGCAGATA
GTTAAGGAGAAAGATGAAGCTGTTCGCAATCAAGAATTTGAAAAGGCTGGAGAGCTACGG
GATAAAGAAATGGATCTTAAGGCTCAGATATCAGGACTAATACAAAAAAACAAGGAGATG
AGCAAGGCAGAGAGTGAGGCAGGAGATGTAGGTGCACTTGTGACTGAAGTTGACATACAA
CATATTGTTGCCGCCTGGACTGGTATCCCTGTTGATAAAGTCTCAGTTGACGAATCTGAT
CGCCTTCTCAAGATGGAAGAGACCTTACACAAACGCGTTATTGGTCAGCATGAAGCAGTA
GAAGCCATTAGCCGTGCTATCCGCCGAGCTCGTGTTGGACTTAAGAACCCTAACCGGCCG
ATTGCCAGCTTCATCTTTTCTGGCCCTACTGGTGTGGGGAAGTCTGAGTTGGCCAAAACA
TTGGCCTCATACTACTTTGGATCTGAAGAAGCCATGATTCGGCTTGACATGAGCGAATTT
ATGGAACGGCACACAGTCTCCAAACTCATCGGTTCACCTCCTGGATATGTTGGTTATACC
GAGGGTGGTCAATTGACTGAGGCAGTTCGGCGCCGTCCCTATACTGTTGTACTCTTTGAT
GAGATTGAGAAAGCCCATCCTGATGTCTTCAATATGATGCTTCAAATTCTGGAAGATGGG
AGGCTAACAGATAGTAAGGGAAGAACTGTCGACTTCAAGAACACACTTCTTATAATGACA
TCAAATGTTGGAAGCAGTGTGATTGAGAAAGGAGGTCGTCGCATAGGATTTGACCTTGAC
TATGATGAGAAGGACAGCAGTTATAACCGAATCAAAAGCTTGGTGACCGAGGAGCTGAAG
CAATACTTTAGGCCAGAGTTCTTGAATAGGCTGGATGAAATGATTGTTTTCAGGCAACTT
ACAAAACTGGAGGTTAAGGAGATAGCTGATATAATGCTGAAGGAGGTGTTCGAGAGACTG
AAAACCAAAGAGATTGAGCTCTCAGTGACAGAGAGATTTAGGGAGAGAGTGGTCGACGAA
GGTTATAATCCTAGTTATGGTGCCAGACCTCTAAGAAGAGCTATAATGCGACTTTTGGAA
GACAACATGGCTGAGAAGATGCTTGCTAGAGAGATTAAAGAGGGTGACTCTGTTATAGTG
GATGCTGATTCCGATGGAAATGTGATTGTGCTCAATGGTAGTAGTGGTGCTCCAAATTCA
TTGCCAGAGTCTCTTCCTGTGTAA

Peptide Sequence

PEP ID

Medtr3g102830.1
PEP Infomation

| ATP-dependent Clp protease ATP-binding subunit | HC | chr3:47377876-47383774 | 20140818
Sequence

MSRVLAQSINVPGLVAGRRHVNNNNGSVRSRPRSVRMMYATQTATMRLSGFSGLRPLNSL
DSMFRPRQDFHSKVLTQIGTNRARGGRGSRCVTRAMFERFTEKAIKVIMLAQEEARRLGH
NFVGTEQILLGLIGEGTGIGAKVLKSMGINLKDSRVEVEKIIGRGSGFVAVEIPFTPRAK
RVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGEG
ADNVGATVGSGSSNSKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNN
PCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKQVITLDMGLLVAGTKYRGEFEERLKK
LMEEIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKH
IEKDPALERRFQPVKVPEPTVSETIQILKGLRERYEIHHKLRYTDDALVAAAELSYQYIS
DRFLPDKAIDLIDEAGSRVRLQHAQLPEEARGLEKEVRQIVKEKDEAVRNQEFEKAGELR
DKEMDLKAQISGLIQKNKEMSKAESEAGDVGALVTEVDIQHIVAAWTGIPVDKVSVDESD
RLLKMEETLHKRVIGQHEAVEAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKT
LASYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFD
EIEKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD
YDEKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERL
KTKEIELSVTERFRERVVDEGYNPSYGARPLRRAIMRLLEDNMAEKMLAREIKEGDSVIV
DADSDGNVIVLNGSSGAPNSLPESLPV*

Transcript Sequence

Gene sequence data has not been registered.