Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr3g085530.1
CDS Infomation

| PIF1-like helicase | LC | chr3:38658911-38655923 | 20140818
Sequence

ATGTTTACAGTTATATATACTATTGAATTTCAAAAATGTGGACTACCGCATGCACACATA
CTGGTGTTTTTGAAGCCAACTTATCGGTGCAAGAAACCTGAGGATCTTGATAAGATTATA
TCAGCAGAGATTCCAAACAAAGATACAGATGGGGAGTTATTTAATATTGTGACTACGCTC
ATGATTCACGGCCCATGTGGTGACCAAAACACAAGATCGCCTTGCATGCTAAATAATAAA
TGTAGCAAGCACTTTCCAATGAAATTTGTTGATCAAATTGTGATCGATAAAGATGATAAT
AGGTTTGTTGTGCCGTATAATAAAACACTCCTCTTGAAGTACAAAGCCCATATCAATGTA
GAGTGGTGCAACCAAATTCGGTCAATCAAGTACCTTTTCAAATATGTAAACAAAGGACAT
GATCGCGTCACCGCAAACTTTTACGGTAATGGATGTGAAAATAGTTTGGATGAGATAAAG
ATGTATTATGATTGTCGGTATTTGTCCGCGTGTGAAGCGGCCTGGAGAATATTCTCTTTT
GACATAAATTACAGAGAACCTTCGGTGGAACGCTTAAATTATCATTTGGAAAATGAGCAT
TCAGTTTTGTACGAAGAAAACGACGACATTGAACAAGTCATTGAGAGATCGCATAGAAAA
ACTACAAAGTTTTTGGCTTGGATGAAAGCAAATGAAAAGTATCCAGAAGCTAGAAATTTG
ACTTACAATCAATTCCCGACCCAGTTTGTGTGGAAGGAAAAAGACCACGAATGGACTCCT
AGACGGTGTGGTTTTTCGATAGGGCGGGTCCATTTTGCTCCGCCTGGTTCCGGCGAAAGG
TTTTACCTAAGAACTCTCTTGAATTACATCAAAGGTCTTACATCTTTCAATGACATCAAG
ACGGTCGATGATGTCAAATATAATACTTTCAAGGAAGCCTGCTTCGCTATGGGGTTACTC
GATGATGACAAGGAGTTTATAGACGCGATAATTGAAGCCAGTCTTTGGGGCATTGGTATT
TATTTACGTAGACTATTCGTAGCACTGATGGTGACAGATCAATTTGCCAGACCAGAGGTC
GTGTGGAATTCTACAAACGAAAATTTAATTGATGACATACTCCACAAACAAAGGCGGCTT
CTTGGATTGAAGGCGTATGCGTTGGCCGAACTAGAAACGATGTTGCAAAGTTTTGGAAAG
AGTTTGTCTGATTTTCCTCCAATGCCAAAGGCGGATGCATCTTTAGTACCGGATGTCGAG
AGTAGGTTGATTCACGATGAGATGAGTTATAATAGGCCTGTACTAGCTGCTCAACATGAC
CGGATGATGTCAACCATGACTTCAGAGCAACGTAATGTATATGATAAAATAATGACAAGA
GTTAAGGAAGACAAATCTGGGTTGTTCTTCCTGTATGGTTATGGTGGTACTGGGAAAACA
TTTATTTGGAGGGCTTTATGTGCTGCTTTGAGGTCTGATGGTGGGATTGTTTTGGCATGT
GCATCAAGTGGGATTGCTGCCTTGCTTATACCCGGTGGAAGAACTGCACATTCAAGATTC
GGTATCCCTTTTACAATAGACGAATGCTCTATGTGTGGAGTTACACCAAATACACCGTTG
GCATCGCTCACTTACCCAATTGGGGAAATCAATGATGTCGACATATCTGTTGTTATCCCG
TCCGACTTGGTTATTCCAAGTTCAGGTAATCCTGTTGCATCTATCGTTGATAGCACTTAC
CCAAATTTGTTAGGAAACATTGGTAAAGCAAAATATTTTCAAAGTAGAGCAATATTGGCG
CCAAAGAATACCATTGTTGAACAGGTTAATGATTATGTGTTCAACTTGATTCCTGGTGAA
GAAAAAATCTATTTGAGTTACGATACACCTTATCATAAAAACATAGATGGTGACGCCGTA
GATGACATCCACACTCCTGAATTCCTCAACACCATTGTGGCGTCCGGATTTCCAAATCAT
CGGTTGCGACTGAAAGTAGGAGCACCTGTCATGTTACTCAGGAACATGGATCAAAGTTTG
GGCTTATGTAACGGTACGAGATTGATCATTACAAAGATGGGAAAATTTATGCTCGAAGGA
CGGGTAATATCTGGTTCTAATATCATTGAGAAGGTGTTTATTCCAAGGTTATCGCTAACA
CCATCTGATAATAGAATTCCTTTCAAATTTAAACGAAGGCAGTTTCCGATATTTGTCTCA
TTTTTGTACGTCGCAATATCACGGGTTACTTCGAGGGGTGGTTTAAAAATATTGATTGCT
GACGACGACGGCGATGATATCGATGTTGCATCAAATGTGGTCTACAGAGAAGTTTTCCGT
AATGTGTAG

Peptide Sequence

PEP ID

Medtr3g085530.1
PEP Infomation

| PIF1-like helicase | LC | chr3:38658911-38655923 | 20140818
Sequence

MFTVIYTIEFQKCGLPHAHILVFLKPTYRCKKPEDLDKIISAEIPNKDTDGELFNIVTTL
MIHGPCGDQNTRSPCMLNNKCSKHFPMKFVDQIVIDKDDNRFVVPYNKTLLLKYKAHINV
EWCNQIRSIKYLFKYVNKGHDRVTANFYGNGCENSLDEIKMYYDCRYLSACEAAWRIFSF
DINYREPSVERLNYHLENEHSVLYEENDDIEQVIERSHRKTTKFLAWMKANEKYPEARNL
TYNQFPTQFVWKEKDHEWTPRRCGFSIGRVHFAPPGSGERFYLRTLLNYIKGLTSFNDIK
TVDDVKYNTFKEACFAMGLLDDDKEFIDAIIEASLWGIGIYLRRLFVALMVTDQFARPEV
VWNSTNENLIDDILHKQRRLLGLKAYALAELETMLQSFGKSLSDFPPMPKADASLVPDVE
SRLIHDEMSYNRPVLAAQHDRMMSTMTSEQRNVYDKIMTRVKEDKSGLFFLYGYGGTGKT
FIWRALCAALRSDGGIVLACASSGIAALLIPGGRTAHSRFGIPFTIDECSMCGVTPNTPL
ASLTYPIGEINDVDISVVIPSDLVIPSSGNPVASIVDSTYPNLLGNIGKAKYFQSRAILA
PKNTIVEQVNDYVFNLIPGEEKIYLSYDTPYHKNIDGDAVDDIHTPEFLNTIVASGFPNH
RLRLKVGAPVMLLRNMDQSLGLCNGTRLIITKMGKFMLEGRVISGSNIIEKVFIPRLSLT
PSDNRIPFKFKRRQFPIFVSFLYVAISRVTSRGGLKILIADDDGDDIDVASNVVYREVFR
NV*

Transcript Sequence

Gene sequence data has not been registered.