Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr3g054400.1
CDS Infomation

| pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 | HC | chr3:21592985-21589785 | 20140818
Sequence

ATGATGGAAAGTGGGCAGGCAGATACACGCAGGCATGAGTCTTACTCAGGAAGGGATTCA
CATGGTAGGTATTATGATCATGAATATGATAGAAAGCGAAACAGATATGAAGGTTCAAGG
AGAAAGCCTAACAGATATGACTTGCACAATCGCCGATGGGAATGGGAAGATGCTCCTCAA
AGGGAAGAAACTCCATGGCATACTCCTTGTTCGTCCTTTAATTCACTTTCTCCTTTGGAT
CATGTTTCTCCGTCTCCTTTTCCAATACGGGCTTCTGGCTCTTCACACAAATCTTCTGTT
GCTGGATATAATCGAAGATTGCATAAACTCGCTTTTTCTTCAGATGAGGAGGAAATAGCA
AATAAATCTGACTTGGGTGAAGAACATAAGTATGAGATTACTGAAAGCATGCGTCAAGAG
ATGGAATACAGTGCAGACCGAGCATGGTATGATAGAGAGGAAGGAAGTACATTGTTTGAT
TTTGATAACTCTTCACTTTTTGTTGGAGATGAGGCTTCGTTTCAGAAAAAAGAGGCCAAG
TTGGCCAAAAGATTGGTCCGAAGAGATGGCACTAAGATGTCCCTTTCTCAAAGCAAGAAA
TTATCTCAGCTTACTGATAATGCTCGATGGGAAGATCGGCAGCTGCTGAGATCAGGTGCT
GTTAGAGGCATAGAGGTTAAGACTGAATTTGATGATGAGGATGAAGGCAAGGTCGTTCTT
GTTGTGCATGATACAAAGCCTCATTTTCTTGATGGCAGAATTGTTTTTACCAAGCAGGCA
GAGCCAGTTATGCCGATAAAAGATCCAACATCTGACATGGCTATAATTTCTCGCAAAGGA
TCTGCGATGGTAAGAGAAATCCATGGGAAGCAGAGTTCAAACAAGTGTCGCCAACGCTTT
TGGGAACTTGCAGGCTCAAAACTTGGTGATATATTAGGCGTTGAAAAAACAGCAGAAAAT
ATTGATGCAGACACTTGTATCGTGGGTGAAGATGGTGAAATTGATTTTAAGGAGGAAGCT
AAGTTTTCAAACCACATGAAGAAGGAAGAAGCTGTGAGTGACTTTGCTGTGTCAAAAACT
CTTACCGAGCAAAGGCAATATCTGCCTATTTTTTCAGTGCGGGAAGAGCTATTACAGGTG
ATTCGTGAAAATCAGGTTGTGGTTGTAGTTGGGGAAACTGGTTCAGGAAAGACAACCCAA
TTGACACAATATCTATATGAAGATGGCTACACTATAGGCGGTATAGTAGGTTGCACCCAA
CCAAGGCGTGTGGCAGCGATGAGTGTTGCCAAGAGAGTTAGCGAGGAGATGGACACGGAG
TTGGGAGATAAAGTTGGCTATGCAATCCGTTTCGAAGATGTGACTGGACCGAATACCATA
ATAAAGTACATGACGGATGGGGTACTTCTACGTGAAACACTTAAAGACTCTGATTTAGAC
AAATATAGGGTTATTGTGATGGACGAAGCCCATGAAAGGTCATTAAGCACAGATGTCCTT
TTTGGAATATTGAAGAAAGTTGTAACCCAACGCCGAGATTTCAAACTGATTGTCACATCA
GCAACTTTGAATGCACAGAAATTTTCACATTTTTTTGGAAATGTTCCAATTTTTCATATT
CCCGGGAGAACATTTCCTATCAATATATTATGGAGTAAAATTCCGGTTGAAGATTATGTT
AAAGGTGCAGTGAAGCAGGCTATGACTATTCACATGACCAGCCCTCCAGGTGACATCCTT
ATCTTCATGACTGGCCAAGACGAGATTGAGGCAGCTTGCTACTCCCTTGCTGAAAAAATG
GAGCAGATGGTATCATCTTCAAATAAAGAAGTCCCGAAACTTTTGATTCTTCCCGTATAT
TCTCAGCTTCCAGCTGACTTGCAAGCAAAGATATTTCAGAAAGCTGAAGATGGTGCGCGC
AAATGCATTGTGGCCACTAATATTGCTGAGACATCACTAACCGTGGATGGTATCTTCTAT
GTTATAGACACGGGCTATGGTAAAATGAAGGTGTACAACCCTAGGATGGGTATGGACGCT
CTACAAGTCTTCCCGGTTAGCCAGGCTGCTGCTAACCAGCGTGCTGGTCGAGCTGGTCGA
ACTGGCCCTGGGACATGCTATCGGTTGTATACAGAGAGTGCTTACCTAAATGAAATGTTG
GCCAGTCCTGTTCCAGAGATTCAGAGAACTAACCTTGGCAATGTCGTCTTGTTGCTGAAA
TCTCTTAAAGTTGAAAATTTACTCGACTTTGATTTCATTGATCCACCTCCGCAGGATAAT
ATTCTTAATTCTATGTACCAGTTGTGGATGTTGGGTGCCCTTAACAATGCGGGGAGATTG
ACTGAACTTGGCTGGAAAATGGTTGAGTTTCCACTGGATCCTCCACTTGCCAAGATGCTT
TTGATGGGTGAGCAGTTCGGGTGTCTTGAGGAGGTTCTGACCATAGTTTCCATGCTTTCA
GTACCATCTGTTTTCTTTAGGCCAAAGGACCGAGCAGCGGAGAGTGATGCTGCACGCGAA
AGATTTTTTGTGCCAGAATCTGATCATTTAACGCTTTACAATGTCTATCAGCAATGGAAA
CAACATGATTACAGAGGTGATTGGTGCAATGACCATTTTTTGCATGTTAAAGGTCTAAGA
AAGGCTAGAGAGGTGAGATCCCAGCTGCTTGATATTCTCAAGACTCTAAAAATTCCGCTG
ACAACGTGCTTTCCTGATACAGACGTTGTTAGAAAAGCAATTTGTTCTGCATACTTCCAC
AATTCAGCAAGACTAATGGGTGTGGGGGAGTATGTTAACACGCGGAATGGAATGCCATGT
TATCTTCACCCCAGTAGTGCTCTCTATGGCATGGGTTGTACTCCCGAATATGTGGTTTAT
CACGAGTTAATCCTAACCACCAAGGAGTACATGCAATGTGCCACAGCCGTAGAGCCCAAG
TGGATGGCTGAGCTCGGACCCATGTTTTTCTCCGTGACGGAGTCTGATACATCACTAATG
GAGCATAAAAAGAAACAGAAACGAGAGAAAACGGCCATTGAGGAGGAAGTGGAGAATTTA
AAGAAGGAGCAAGCGAAGTTCGAGAGAGAAAATAAACGGAAGGAGATAGAAAAAAGGGCC
AAGAATCAGCAGCAGATTTCCATCCCAGGTTTAAAAAAGTGTTCTTCCACATTCTTGAGA
CCAAAGAAGTTTGGTTTGTAA

Peptide Sequence

PEP ID

Medtr3g054400.1
PEP Infomation

| pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 | HC | chr3:21592985-21589785 | 20140818
Sequence

MMESGQADTRRHESYSGRDSHGRYYDHEYDRKRNRYEGSRRKPNRYDLHNRRWEWEDAPQ
REETPWHTPCSSFNSLSPLDHVSPSPFPIRASGSSHKSSVAGYNRRLHKLAFSSDEEEIA
NKSDLGEEHKYEITESMRQEMEYSADRAWYDREEGSTLFDFDNSSLFVGDEASFQKKEAK
LAKRLVRRDGTKMSLSQSKKLSQLTDNARWEDRQLLRSGAVRGIEVKTEFDDEDEGKVVL
VVHDTKPHFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSAMVREIHGKQSSNKCRQRF
WELAGSKLGDILGVEKTAENIDADTCIVGEDGEIDFKEEAKFSNHMKKEEAVSDFAVSKT
LTEQRQYLPIFSVREELLQVIRENQVVVVVGETGSGKTTQLTQYLYEDGYTIGGIVGCTQ
PRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPNTIIKYMTDGVLLRETLKDSDLD
KYRVIVMDEAHERSLSTDVLFGILKKVVTQRRDFKLIVTSATLNAQKFSHFFGNVPIFHI
PGRTFPINILWSKIPVEDYVKGAVKQAMTIHMTSPPGDILIFMTGQDEIEAACYSLAEKM
EQMVSSSNKEVPKLLILPVYSQLPADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIFY
VIDTGYGKMKVYNPRMGMDALQVFPVSQAAANQRAGRAGRTGPGTCYRLYTESAYLNEML
ASPVPEIQRTNLGNVVLLLKSLKVENLLDFDFIDPPPQDNILNSMYQLWMLGALNNAGRL
TELGWKMVEFPLDPPLAKMLLMGEQFGCLEEVLTIVSMLSVPSVFFRPKDRAAESDAARE
RFFVPESDHLTLYNVYQQWKQHDYRGDWCNDHFLHVKGLRKAREVRSQLLDILKTLKIPL
TTCFPDTDVVRKAICSAYFHNSARLMGVGEYVNTRNGMPCYLHPSSALYGMGCTPEYVVY
HELILTTKEYMQCATAVEPKWMAELGPMFFSVTESDTSLMEHKKKQKREKTAIEEEVENL
KKEQAKFERENKRKEIEKRAKNQQQISIPGLKKCSSTFLRPKKFGL*

Transcript Sequence

Gene sequence data has not been registered.