Plant GARDEN
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TOP > About the Species(Medicago truncatula ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr2g040060.1
CDS Infomation

| lycopene epsilon cyclase | HC | chr2:17570312-17577439 | 20140818
Sequence

ATGGAGTGCGTTGGAGCGAGAAACTTAACGGCAATGGCGTTTTGCATAAGTCCTTCTTTG
CGGTTAAGGAGAAAGAAGATTTGTTGGAGAAGAAGAGAAGTTTCATCGAACGTGATTCGG
TTGCGTTCGATGAAAGTGAATGCGAAAGCAGGTGGTGCAGGAAGTGAGAGTTGCGTTGTT
GCTAAAGAGGATTATGCTGATGAGGAGGATTTTGTTAAAGCTGGTGGTTCTGAACTTGTT
TTTGTTCAAATGCAGCAGAAAAAGTCTATGGACTTGCAATCTAAGCTTGCGGATAAGTTG
CCACCTATCTGTGTTGGAGATGGTATACTAGATCTAGTTGTTATTGGTTGTGGTCCTGCT
GGTCTTGCTCTAGCTGCTGAATCTGGCAAGTTAGGATTAAAAGTTGGACTTATTGGTCCG
GATCTCCCTTTCACAAACAACTATGGTGTGTGGGAGGACGAATTTAAAGGTCTTGGACTT
GAAGGTTGTATTGAGCATGTTTGGAAGGATACCGTTGTATATATTGATAATAAAAATCCC
ATTTCAATTGGACGTTCTTATGGCCGTGTCAGTCGGCATTTGCTTCACGAGGAATTGTTA
AGAAGGTGTGTCGAGTCAGGTGTCTCATATCTTGGCTCAAAAGTAGAAAGGATTGTTGAG
GCTAGCAATGGTCATAATCATGTTGTCTGTGAATATGATACTGTAGTGCCTTGCAGGCTT
GCTACTGTTGCATCAGGAGCAGCTTCAGGGAAACTATTGCAGTATGAGGTTGGGGGTCCA
AAGGTGTGTGTACAAACAGCTTATGGTGTGGAAGTTGAGGTTGAAAACAGTCCTTATGAT
CCAAACGTGATGGTTTTCATGGATTACAGAGACTATATGAAGAACAATGTTCAAAGTCTA
GAAGCTAAATATCCAACATTTCTTTATGCAATGCCCATGTCCCGTTCAAAAGTGTTCTTT
GAGGAAACATGTTTGGCGTCTAAAGATGCCATGCCTTTTGATTTATTAAAGAAAAAGCTC
TTATCAAGATTAAAGACAATGGGGATCAAAGTTACAAAAACTTATGAAGAGGAATGGTCT
TATATCCCAGTTGGTGGATCCTTACCAAACACAGAGCAGAAGAACCTTGCGTTTGGTGCA
GCTGCCAGCATGGTGCATCCAGCCACAGGCTACTCTGTTGTGAGATCGTTGTCAGAAGCT
CCGCAATATGCTTCAGTAATTGCTACAATTTTGAATGACGGTACTGCAAGGGACATTGTT
ACTTATGGAAGAAGTAAGGAGAATCCATCCATGCGAGCTTGGAATACACTTTGGCCACAA
GAAAGGAAACGACAGAGATCATTCTTTCTTTTTGGATTAGCACTAATTGTGCAGCTGGAC
ATTGAAGGCACTAGAACATTCTTTCGTACTTTCTTCTGCTTACCTGAGTGGATGTGGCAA
GGATTTCTTGGTTCTTCTCTGTCCTCGAAAGATCTTCTATTGTTTGCACTCTACATGTTC
ATAATAGCACCAAATAACTTAAGAATGTCTCTAGTCAGACATCTGCTTTCAGATCCTACA
GGGTCAACTATGATAAAAACCTACTTGACGATATAG

Peptide Sequence

PEP ID

Medtr2g040060.1
PEP Infomation

| lycopene epsilon cyclase | HC | chr2:17570312-17577439 | 20140818
Sequence

MECVGARNLTAMAFCISPSLRLRRKKICWRRREVSSNVIRLRSMKVNAKAGGAGSESCVV
AKEDYADEEDFVKAGGSELVFVQMQQKKSMDLQSKLADKLPPICVGDGILDLVVIGCGPA
GLALAAESGKLGLKVGLIGPDLPFTNNYGVWEDEFKGLGLEGCIEHVWKDTVVYIDNKNP
ISIGRSYGRVSRHLLHEELLRRCVESGVSYLGSKVERIVEASNGHNHVVCEYDTVVPCRL
ATVASGAASGKLLQYEVGGPKVCVQTAYGVEVEVENSPYDPNVMVFMDYRDYMKNNVQSL
EAKYPTFLYAMPMSRSKVFFEETCLASKDAMPFDLLKKKLLSRLKTMGIKVTKTYEEEWS
YIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPQYASVIATILNDGTARDIV
TYGRSKENPSMRAWNTLWPQERKRQRSFFLFGLALIVQLDIEGTRTFFRTFFCLPEWMWQ
GFLGSSLSSKDLLLFALYMFIIAPNNLRMSLVRHLLSDPTGSTMIKTYLTI*

Transcript Sequence

Gene sequence data has not been registered.