Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr1g111020.2
CDS Infomation

| pentatricopeptide (PPR) repeat protein | HC | chr1:50134416-50129873 | 20140818
Sequence

ATGGAACTCCACACCCACTTGATCAAGTTTGGATTTTCCCGCCACTCAAGTCTCAGAAAC
CATTTGTTAACATTCTATTCCAACTCTCGTCGTTTTGGGTATGCCTGCAACCTGCTTGAT
CAAAGTACTGAACCAAGAACGGTCGTTTCATGGTCTGCTTTGATATCTCGTTACGTGCAA
AATGGGTTTCATAAAGAAGCGTTATTGGCATTTAATGAGATGTGTACGTTGGGTGTTAAG
TCTAATGAGTTTACATTCCCAACTGTTCTCAAAGCATGTTCGATTAAGAAAGATTTGAAT
ATGGGAAAAAAGGTTCATGCCATGACTGTGGTCTCAGGGTTTGAATCAGATGCTTTTGTT
TCCAACACTTTAGTTGTTATGTATGCCAAATGCGGGCAGTTTAGTGATTCTAAGAAATTG
TTTGGTATGATTTTGGAGCCAGGTGTTGTTTCGTGGAATGCCTTGTTTTCTTGTCACGTG
CAAAGTGATTTCTTAGCTGAAACTGTTGATTTATTTAAACGGATGGTTGAGGGCAAAGTA
AGACCTAATGAGTACAGCCTTTCAATTATATTGAATGCCTGTGCTGGATTGCGGGATGGA
GGTATCGGAAGGACGGTTCATGGCCTTTTAATGAAGCTTGGACATGGTTTGGATCAATTT
TCTGCAAATGCCTTGGTTGATATGTATGCAAAAGCAGGGAGGATTGAAGATGCTGTTGAT
GTTTTTCGAGAAATGATTCACCCAGACACTGTTTCTTGGAATGCAATTATTGCTGGTTGT
GTTCTTCATGAGTATAATGATTTGGCTTTGATACTGTTGAATGAGATGAAAAAGTCTGGA
AGCTGTCCCAATGTGTTCACCTTATCAAGTGCCTTAAAAGCATGTGCTGCAATGGGGTTG
AAGGATTTGGGGAGACAGATACATTCTTGTTCGGTAAAGATTGATAGTGATTCAGATTTG
TTTGTGGCTGTTGGACTAATAGATTTGTATTCCAAGTGTGAGATGATGGATGATGCAAGA
AGAGCTTATGATTTGATGCCAACAAAAGACCATATTATTGCAGGGAATGCTTTGATCTCT
GGTTACTCGCAGTGTGGTGATGACGAACAAGCAATCTCACTTTTTTTTGAATTGCACCAT
GAAAATATAGATTTCAACCAAACTACTTTGTCAACAGTTCTTAAATCTGTGGCCAGCTTG
CAGCAAATCAAAGTATGTAAGCAAATTCACACGCTTTCCATCAAATGTGGAATTTATTCA
GATTTCTATGTTATAAACAGTCTGCTTGACACTTATGGAAAATGTAGTCATATAGATGAA
GCTTCAAAAATATTCGAAGAGCGCACTTGGGAAGATTTGGTGGCTTACACTTCTATGATA
ACTGCATATTCTCAACATGGGGATGCAGAAGAGGCTTTGAAGCTATATTTGCAAATGCAA
GTTGCAGACATCAAGCCTGATCCGTTTGTCTGCAGTTCTCTTTTAAATGCTTGCGCAAAC
TTGTCGGCATATGAGCAAGGGAAACAATTACATGTCCATGCCATTAAGTTTGGATTTATG
TCTGATATTTTTGCCAGCAATTCTCTTGTTAATATGTATGCAAAATGTGGAAGCATAGAG
GATGCTGATCGCGCCTTTTCCGAGATACCACAGAGAGGTATAGTCTCGTGGTCTGCAATG
ATTGGAGGGTTGGCTCAACATGGTCATGGTAAAGAGGCTCTTATCATGTTCAATCAAATG
CTTAAAGATTGTGTGTCACCAAACCATATTACATTAGTCAGTGTTCTCTGTGCATGTAAT
CATGCTGGTTTGGTAAATGAGGGGAAACAATATTTTGAAACAATGGAGGAAAAGTTTGGA
ATCAAACCAACACAAGAGCACCATGCTTGCATGATTGATCTCCTTGGAAGATCAGGGAAA
CTAAATGAAGCAGTGGAGCTTGTGAATTCCATTCCATTTGAAGCCGATGGATCCGTTTGG
GGGGCGCTTCTTGGTGCTGCAAGAATCCACAAAAATGTTGAACTTGGTGAGAAAGCTGCA
GAGAGGCTTTTCACTCTAGAGCCAGACAAATCTGGTACTCTTGTTCTCCTTGCAAACATT
TATGCATCAGCAGGGATGTGGGAAAATGTTGCAAATGTTAGAAAGGTTATGCAAAACAGC
AATGTGAAGAAGGAACCTGGAATGAGTTGGATTGAGGTCAAAGACAGGATACACACTTTC
ATTGTTGGAGATAGAAATCATTCTAGAAGTGATGAAATATTTGCTAAATTGGATGAGTTA
AGCGAACTTCTAAGTAAAGCTGGATACAGTCCCATCATAGAGACCGATATACATAATGTG
GAACGAAGTGAAAAGGAAAAGCTCTTATATCATCACAGTGAGAAACTTGCCGTGGCTTTT
GGATTAATTGTCACACCACCTGGAGCTCCAATAAGAGTAAAGAAGAATTTGAGAGTTTGC
GTTGACTGCCACACCTTTCTCAAATTAGTATCTAAGCTTGTTTCAAGGCAAATTGTTGTC
AGAGATATTAATAGGTTCCACCATTTTAAAAATGGATCATGTTCCTGTGGTGATTATTGG
TAA

Peptide Sequence

PEP ID

Medtr1g111020.2
PEP Infomation

| pentatricopeptide (PPR) repeat protein | HC | chr1:50134416-50129873 | 20140818
Sequence

MELHTHLIKFGFSRHSSLRNHLLTFYSNSRRFGYACNLLDQSTEPRTVVSWSALISRYVQ
NGFHKEALLAFNEMCTLGVKSNEFTFPTVLKACSIKKDLNMGKKVHAMTVVSGFESDAFV
SNTLVVMYAKCGQFSDSKKLFGMILEPGVVSWNALFSCHVQSDFLAETVDLFKRMVEGKV
RPNEYSLSIILNACAGLRDGGIGRTVHGLLMKLGHGLDQFSANALVDMYAKAGRIEDAVD
VFREMIHPDTVSWNAIIAGCVLHEYNDLALILLNEMKKSGSCPNVFTLSSALKACAAMGL
KDLGRQIHSCSVKIDSDSDLFVAVGLIDLYSKCEMMDDARRAYDLMPTKDHIIAGNALIS
GYSQCGDDEQAISLFFELHHENIDFNQTTLSTVLKSVASLQQIKVCKQIHTLSIKCGIYS
DFYVINSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAYSQHGDAEEALKLYLQMQ
VADIKPDPFVCSSLLNACANLSAYEQGKQLHVHAIKFGFMSDIFASNSLVNMYAKCGSIE
DADRAFSEIPQRGIVSWSAMIGGLAQHGHGKEALIMFNQMLKDCVSPNHITLVSVLCACN
HAGLVNEGKQYFETMEEKFGIKPTQEHHACMIDLLGRSGKLNEAVELVNSIPFEADGSVW
GALLGAARIHKNVELGEKAAERLFTLEPDKSGTLVLLANIYASAGMWENVANVRKVMQNS
NVKKEPGMSWIEVKDRIHTFIVGDRNHSRSDEIFAKLDELSELLSKAGYSPIIETDIHNV
ERSEKEKLLYHHSEKLAVAFGLIVTPPGAPIRVKKNLRVCVDCHTFLKLVSKLVSRQIVV
RDINRFHHFKNGSCSCGDYW*

Transcript Sequence

Gene sequence data has not been registered.