Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr1g099590.1
CDS Infomation

| pentatricopeptide (PPR) repeat protein | HC | chr1:44985847-44989750 | 20140818
Sequence

ATGCAAATGCTATGTACCAAAACTTTTTCACTATCCCGCTTCCAAGAAACTTGTTTACGT
GTTCTTTCATTCTGCAACTCAAACTCTCTCAAAGAAGGAATATGCATTCATAGCCCCATA
ATCAAACTTGGTCTTCAACATGACTTGTATTTAACCAACAATTTACTCTCTTTATATGCT
AAAACCTTTGGAGTTCATCGAGCACGCCACTTGTTCGATGAAATGCCTAACAGAGACGTC
GTATCATGGACAACGATTCTGTCTTCACACACCAAGACTAAGCATCATTCTGATGCCCTG
CAGTTGTTTGATATGATGATAGGTTCTGGTGAGTATCCGAATGAGTTTACACTGTCTAGT
GCGTTAAGGTCGTGTTTTGCTTTAGGAGAGTTTGAACGTGGGATGCAGATTCATTGTTCT
GCTGTGAAGCTTGGGTTAGAGATGAATCGTTTTGTTGGAACTTCTTTGGTTGAGTTTTAT
ACCAAGTGTGGTTGTTGTAGTGTTGAAGCGTGGAAATTGCTTTCGTTGGTGAAGGATGGC
GGTGATGTTGTGTCTTGGACGACAATGTTGTCTTCTTTAGTGGAAAATGGTAAATGGGGT
GAAGCTTTTGAAATCTATGTTAAAATGATTGAATCAGGTGTTTATCCGAATGAATTTACG
TTTGTTAAATTGTTAGGTGCCGTGTCTTCCTTTCTTGGTTTATCGTATGGGAAACTGCTG
CATGCACATTTAATCATGTTTGGTGCTGAATTGAATTTGGTGTTGAAGACAGCTGTTGTT
GATATGTATTCAAAATGCAGACGGATGGTCGATGCTATTAAGGTTTCTAATCTGACACCT
GAATATGATGTGTACTTATGGACCACCCTTATCTCTGGATTTACTCAAAATTTGCAGGTT
AGAGAGGCTATCAGTGTTTTTCGTGATATGGAATTATCTGGCCTCCTACCAAATAATTTT
ACGTATTCTAGTTTATTGAATGCTAGCTCCTCAATTTTATCATTGGACTTAGGGGAACAA
TTTCATTCGCGGGTTATCATTGTTGGACTTGAGGATGATCTTTATATAGGAAATGCACTG
GTTGATATGTACATGAAATGCTCCCACATCACTACAAATGCTGTGAAAGTTTTTAGAGAG
ATAACATCACCAAATGTCATGTGTTGGACTTCTTTGATTGCTGGTTTTGCAGAAAAAAGA
TTAGAAGATTCTTTTCAGTTGTTTGCTGAGATGCAAGCAGCAGGAGTAAGACCGAATTCC
TTTACAATGTCTGCCATTCTTGGAGCTTGCAGCAAAACGAGGTCTCTTGTTCCAACAATG
ATGCTCCATGGACATATCATAAAAACAAAAGTAGACATAGATATAGCTGTTGCGAATGCT
CTTGTAGATACTTATGCTGGAGTGGGGATGATTGACGAGGCATGGTCTGTAATTGGTACA
ATGAATCTTAGAGATTCAATCACGTACACATGTTTAGCCGCAAGGCTAAACCAGAAGGGG
CATCATGGAATGGCATTAAAAGTTTTGATTCACATGTGCAATGATGGGATTAAAATGGAT
GAATTTAGCTTGGCAAGTTTCTTATCAGCTGCAGCTGGCTTAGGCACTATGGAAACTGGA
AAGCAGCTGCATTGTTATTCTGTCAAATCAGGCTTCCAGAGATGTCACTCAGTTTCAAAC
AGCTTAGTTCACTTGTACAGCAAATGTGGTAGTATTCACGATGCAAATAGAGCTTTTAAA
GATATTAGTGAGCCAGATGCATTTTCATGGAACGGTTTGATATCTGGATTTTCTTGGAAT
GGCTTGATATCCCATGCTCTTTCTACTTTTGATGACATGAGGTTAGCAGGAGTTAAACCT
GATTCTATAACACTGTTGTCGCTGATTTCTGCTTGCAGCCATGGCGGCTTATTAGAACTG
GGTCTTGAGTATTTCCATTCTATGCAAAAAGAATACCATATAACCCCAAAACTAGATCAC
TACATGTGTTTAGTTGATCTTCTTGGTAGAGGTGGTCGCCTAGAGGAAGCTATGGGAGTT
ATTGAAAAAATGTCTTTCAAGCCAGACTCTTTGATTTGTAAAACTTTATTAAATGCTTGC
AATTTACACGGAAATGTTGCTCTAGGAGAAGATATGGCAAGGCGATGTCTTGAGCTTGAT
CCATCTGATCCTGCAATATATTTGTTGCTTGCAAACTTATATGACAACGCTGGACTCTCT
GATTTTGGAGAGAAGACACGTCGGTTGATGAGAGAAAGAGGTTTAAGGAGAAGTCCTGGG
CAGTGCTGGATGGAGATAAGAAGCAGAGTTCATCACTTCTCCGCAGGAGAGAAGATAAAC
GAAGACGAGATTACTGAAAAGCTGGAGTTTCTTATAACTGAATTTAGGAATAGGCGGTAT
CAATACCAAGAGAATGAAGATAAGTTTTACCACCCAGAGCAATTGGCAGTTGCATTTGGT
GTTCTTAATGCACCATCTACGTCTCCAATTCGTATATACAAGAATTCACTGATCTGCTCT
CACTGCCATACTTTTATAATGCTTTCCACGCAAGTGATTGGTAGGGAGATAATTATGAGG
GATAGGAAACGGTTCCATTTCTTTAAGGATGGACAATGTTCTTGCAGAGATATATTTTGT
ATCGCCCTTGTGAAAACGGATACTATGTCGTTGGAACAGGATAATCAGACTGTTGATCTT
GAAGCTTCCAAGCCTATTTCTTTAGTCCATGGAGGATGA

Peptide Sequence

PEP ID

Medtr1g099590.1
PEP Infomation

| pentatricopeptide (PPR) repeat protein | HC | chr1:44985847-44989750 | 20140818
Sequence

MQMLCTKTFSLSRFQETCLRVLSFCNSNSLKEGICIHSPIIKLGLQHDLYLTNNLLSLYA
KTFGVHRARHLFDEMPNRDVVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSS
ALRSCFALGEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDG
GDVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLL
HAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQV
REAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNAL
VDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFAEKRLEDSFQLFAEMQAAGVRPNS
FTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGT
MNLRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETG
KQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLISGFSWN
GLISHALSTFDDMRLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITPKLDH
YMCLVDLLGRGGRLEEAMGVIEKMSFKPDSLICKTLLNACNLHGNVALGEDMARRCLELD
PSDPAIYLLLANLYDNAGLSDFGEKTRRLMRERGLRRSPGQCWMEIRSRVHHFSAGEKIN
EDEITEKLEFLITEFRNRRYQYQENEDKFYHPEQLAVAFGVLNAPSTSPIRIYKNSLICS
HCHTFIMLSTQVIGREIIMRDRKRFHFFKDGQCSCRDIFCIALVKTDTMSLEQDNQTVDL
EASKPISLVHGG*

Transcript Sequence

Gene sequence data has not been registered.