Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr1g090850.1
CDS Infomation

| histidine kinase 1 | HC | chr1:40899727-40895395 | 20140818
Sequence

ATGGCATTACAGCCTTTGTCTATCGTGATCTTACTGGCATATGGTGCACTGATAACTCTT
ATCTCATTGACACCATGTTGGTATGTCATGGTAACACATATCGAGAAACAAGCGAATTTG
AGCTCAGAAAATATTGTAACCCAACTCCAATCAGAAATTAAGTACTCAGCTGAACTGTTG
CACCCGATGAAATCATCATCGACAAATTTAGCAAGATTGTTGAGTTCAAGACTTGATTCT
ACTAACATCTCTTTCTCTGATATTGAAACCAAGGTTGCTCCATTATTATTTGAAGCATTT
GAGACAATTCCTCACTTAACACAAATCTCATACATTGGAATGGAAGGTCTCTTTTTCTCA
TATTGCAGTGATCATGATCAAGCTCTTGCAATATACTCAAACTCATCATCAAATAAAATC
TTGTACTATGTCCATCCTGTGAATAATGAAACTGGAAAGGTTTTTGGAGAAGCCATAATA
TCAAACTCTTCTATCAGCACAAGTTGGATTAAGAAAGCAGCTAATATTTCAAATGAATTT
GCCTCATTGGGAACCAGGTGGACCAATGGACATGATCTTTTGTTTCTAAATTCTGCTAGA
GTCAACAAAATAGGAGTGATCTCTCTAGGATTTTCAGCAAAAGCAATAACTGATTCTGTT
ACTCGTGTCAACCGTTTAGGAACGGGCACATATTTGGCTACAAAAGATGGACAAATTCTT
GTCGAAGGGATTCAACATATTCGTTTGGTTATTTCTAATGATTCGGTTTCATTCCAATCA
GTGAATGCAAATGGAGATGTGATAAAGAATTATGAGGGTACTGTCACATGCAAGGATGAA
GCTAATGCTTCTAGTTTGAATATTCAAAATACTCAATATCTAATCCGCTGCTCTCCGATT
GATATATTGGGAATAGAATCTGTGAATGTTTTGGCTGTACCAAGAAATGGATTTGATGTG
AGTTACAAGAAAATGGGATTGGCTCTATTGAATGTAATGTTAGTAATGATACTTGTTGCT
GTCTTAGGTTTTCTATTTATAGATGGTAGAGCCATAAGGAGAGAAATGCATTTGTGTGCC
TCACTTATCAAACAAAAAGAGGCCACTCACCAAGCTGAGAGAAAAAATATGAACAAGAGC
CTCGCCGTTGCTAGCGCTAGCCATGATGTTCGCACTTCTCTCGCAGGCATTACTGCTCTC
ATAAAAATTTCATCTAAGTTAGTTCCACCTGGTTCAGAATTGGCTTCCAATTTAATCCAA
ATGGAGGATTGTACACAAGACTTACTAGGACTATTGAACTCTATACTTGACACAAGCAAA
ATTGAGGTAGGAAAAATGGAACTTGTGGAAGAAGAATTTGATTTATCTCATTTCTTGGAA
GAAGTGGTTGATATATACCATCTTGTGGCGATGGAGAAAGGTGTAGATCTTGTATTGGAC
CCTTGTAATGGTTCTGTTATAAAATATTCGCGCGTTAAAGGCGACAGGGGAAGACTTAAA
CAAGTTTTGTGTAATTTACTGAACAATGCTGTTAAATTTACAAATGAAGGACACATAACG
GTTCGAGTGTGGGCTCGGAAGCAAACATTAAGTAGCTCAATAATCAAGACTAACCAAAAT
AGTTTCATGAAACAATTGTCATGGTTGTTTTCTAAGAAAAAAAATGAAGCAGATGAGGAC
ATAGAAAAAACTATGAATTCAATTCAACAAGATCCTCCGCGTTCTATGGATTTCACATTT
GAAGTTGATGACACAGGAAAAGGAATTCCTAAAGAGAATTACAAGTCTGTATTTGAGAAT
TATGTTCAAGTCAAAGAAACTAATCCTGTCCAAGAAGGAACAGGCTTAGGACTTGGAATT
GTGCAGTCTTTGGTACGTTTGATGCATGGAGATATTGAAATTGTGGACAAGAATATTGGT
GAAAAAGGAACATGTTTTAGGTTCAATGTTCTCCTCGGTTTATGTGAAGGTGAAACAGTG
ACAGATTTTAGCACAAAGGAAGGTCTTGAGTATGGAACAAGTAACGGCACTCAAGCTCGA
GGGAGAACCACTCATGCTACTAGTTCTAGTTCAAACATTTGTTCCATGAGTCCCATGTAT
CATATGTGCAACTCTAGTCCTAGGCTCGAGCCATCCCGTGTTGTTCTTTTCATTGGAAAT
GTGGAGCGTCGGAGGACTTGTAAAAGGTTTATGAAGAGCTTAGGGATTAAAGTTAAGGTT
GTGAAGTGTCAAAAAGATCTGTTTGATACTCTAGAGGAGATCAAACAGAAAGGTCGTCGT
TCAAATGGCCCAAGTTCTCCAGAATCCTCTTCCAATTTGAGTTCTTCTCATAATTCATTT
TCTAGAGCTAAAGGTGTTCCCTTGAGTTTTATGGATGGAACTGAGTATATGTCTCCAGTG
TTCAAAAAGACAAACTTCGGAACTGTAGCATGTTTTGTCTTGATTGTCATCGATGCAAAT
GCAGGATCGTCATTTTCTGAACTCTTTGGGATTGTATCCAAATTCAAGAAAGGCCTTTCG
AACTCTTGTAACGTTGTTTGGTTGGATAATCCACATATGCATCGTATCGATTCCAGAATA
ATTGATCAAAATGACATTGTCATATCGAAACCATTTCACGGTAGTCGTTTGTTCCAAGTC
ATAATGCTTCTTCCTGAGTATGATAATGGTAGTGTTTGGCAAAGCATTAAGAAACCTCAC
ACTAGAAATTCTCCGGTTCACCAAGGAGAAATTCAAGAATGTGAAGACTCAAGCTGTTAC
AAACCTTTGCATTGCAAGAAGTTTTTGGTTGTTGAGGATACTAAAATTTTACGTGTTATA
GCGACAAATATATTGGGTTCGCTTGGTGCAACTGTCGAACAATGTGAGAATGGCAAAGAA
GCTGTAATGCTAGTTGTTGAAGGTCTAAAAAGAGATGATCCTAATCCTCCTTATGATTAC
ATCTTAATGGATTGCCAGATGCCGGTGATGGATGGATTTGAGGCAACAAGGCGGATACGA
GAGATGGAGAAGCCGTTCGGTGTTCGTATTCCTATCATTGCATTAAGTGCAGATATTGAT
AGATCGACGACGGTGACTGGAATGGACTTTTATATAGAGAAGCCACTTAGAAAAGAGCAT
TTACTTGAAGCCATCAGAATCTTAAACAGTTAA

Peptide Sequence

PEP ID

Medtr1g090850.1
PEP Infomation

| histidine kinase 1 | HC | chr1:40899727-40895395 | 20140818
Sequence

MALQPLSIVILLAYGALITLISLTPCWYVMVTHIEKQANLSSENIVTQLQSEIKYSAELL
HPMKSSSTNLARLLSSRLDSTNISFSDIETKVAPLLFEAFETIPHLTQISYIGMEGLFFS
YCSDHDQALAIYSNSSSNKILYYVHPVNNETGKVFGEAIISNSSISTSWIKKAANISNEF
ASLGTRWTNGHDLLFLNSARVNKIGVISLGFSAKAITDSVTRVNRLGTGTYLATKDGQIL
VEGIQHIRLVISNDSVSFQSVNANGDVIKNYEGTVTCKDEANASSLNIQNTQYLIRCSPI
DILGIESVNVLAVPRNGFDVSYKKMGLALLNVMLVMILVAVLGFLFIDGRAIRREMHLCA
SLIKQKEATHQAERKNMNKSLAVASASHDVRTSLAGITALIKISSKLVPPGSELASNLIQ
MEDCTQDLLGLLNSILDTSKIEVGKMELVEEEFDLSHFLEEVVDIYHLVAMEKGVDLVLD
PCNGSVIKYSRVKGDRGRLKQVLCNLLNNAVKFTNEGHITVRVWARKQTLSSSIIKTNQN
SFMKQLSWLFSKKKNEADEDIEKTMNSIQQDPPRSMDFTFEVDDTGKGIPKENYKSVFEN
YVQVKETNPVQEGTGLGLGIVQSLVRLMHGDIEIVDKNIGEKGTCFRFNVLLGLCEGETV
TDFSTKEGLEYGTSNGTQARGRTTHATSSSSNICSMSPMYHMCNSSPRLEPSRVVLFIGN
VERRRTCKRFMKSLGIKVKVVKCQKDLFDTLEEIKQKGRRSNGPSSPESSSNLSSSHNSF
SRAKGVPLSFMDGTEYMSPVFKKTNFGTVACFVLIVIDANAGSSFSELFGIVSKFKKGLS
NSCNVVWLDNPHMHRIDSRIIDQNDIVISKPFHGSRLFQVIMLLPEYDNGSVWQSIKKPH
TRNSPVHQGEIQECEDSSCYKPLHCKKFLVVEDTKILRVIATNILGSLGATVEQCENGKE
AVMLVVEGLKRDDPNPPYDYILMDCQMPVMDGFEATRRIREMEKPFGVRIPIIALSADID
RSTTVTGMDFYIEKPLRKEHLLEAIRILNS*

Transcript Sequence

Gene sequence data has not been registered.