Plant GARDEN
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TOP > About the Species(Medicago truncatula ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr1g088980.1
CDS Infomation

| DegP protease | HC | chr1:39969497-39960538 | 20140818
Sequence

ATGGCTGTTGCACTTTCAAGTTACTGTTCCATGTTCTCTGTGTTATCTTCTTCCACTGTC
AAATTCCGCTACTCACATAGGCACACTCATACACCTTCACAGAGACCCTTCATTTCCATT
CGTTGCAGCCGCACTCCTTCCAATTCTGACCCCAATTTCAAAGGACAGAATTCGTTGGAG
GAAAGGTCCACTGGAGGGAATGTGGTGCCAGCTTCTTTTAAGTCTTCAAGGAAAAATAAG
GACTTTGTGGTAGACTCCAAGGATCAGCAGGGTGAATCAAGTGTTTTACAAGATTCGGCT
TTCCTCAATGCTGTTGTGAAGGTTTACTGCACGCATACTGCCCCAGATTATTCACTTCCA
TGGCAAAAACAGAGACAATTCACAAGCACTGGAAGTGCGTTTATGATTGGAGGCAAGAAA
CTATTAACCAACGCACATTGTGTGGAGCACGATACACAGGTTAAGGTCAAGAGAAGAGGG
GATGACTCGAAATATGTGGCTAAGGTTTTAGCCAGAGCTGCTGGTTGTGATTTAGCTTTG
CTTTCAGTAGAAAGCGAGGAGTTTTGGAGAGATGTAGAACCTCTTAGATTTGGACATTTG
CCACATCTACAGGATTCTGTAACGGTTGTGGGATATCCTTTTGGAGGAGACACAATTTCA
GTGACAAAGGGAGTTGTATCTCGTGTAGAGGTTACATCATATGCTCATGGATCATCTGAG
TTGTTAGGCATTCAAATTGATGCAGCAATAAATCCTGGCAATAGCGGAGGCCCAGCATTC
AATGATCAAGGAGAGTGCATTGGGGTGGCATTTCAGGTCTACAGATCTGAAGATGCTGAG
AATATTGGATATGTGATTCCATCAACAGTTGTATCTCATTTTCTGACTGACTACGAAAAG
AATGGCAAGTATACTGGTTTCCCTTGTCTTGGAGTACTTATACAAAAGTTAGAGAATCCT
GCACTGCGAGCATGTTTGAAACTACAGTCTAATGAGGGTGTATTGGTACGTAGAGTTGAA
CCAACTTCTGATGCAAATAATGTATTAAAGGAGGGTGATGTGATTGTCAGCTTTGATGAT
ATACGTGTTGGATGTGAAGGAACAGTTCCATTCCGCTCAAATGAGAGAATTGCCTTCCAC
TACCTCATTAGTCAAAAATTTGCAGGTGATACTGCAGAACTTGGTATCGTCAGAGACGGA
ACATCAATGAAAGCTAAAGTTATTTTAAACCCACGAGTTCATTTGGTTCCCTTTCATATT
GATGAAGGTCAGCCTTCCTACTTAATTATTGCCGGCTTAGTGTTCACACCTCTTTCAGAA
CCATTGATTGAGGAGGAACGTGAAGATTGTATAGGGCTAAAGTTATTGGCAAAGGCGCGT
TATTCATTTGCAAGGTTTAAAGGGGAACAGATTGTAATTCTCTCACAGGTCTTGGCAAAT
GAACTCAACATAGGTTATGAGGATATGAGCAATCAGCAGATTATAAAATTCAACGGAGTT
CGAATTAAAAACATCCATCATCTTGCTCATCTCATTGATTCATGCAAGAACAAATATCTG
TGTTTTGAATTTGAAGATTGCTATGCTGCTGTTTTGGAGAGAGAAGCCGTTGCTGCCGCA
TCGTCATCTTTGCTGAGAGACTATGGTATTCCATCTGAAAGATCTTCTGATCTTTTGCAA
CCATATGTGGATTCACAAGAAGTAGAAGGTGACCAACCACCAGACCAGGAATTTGGTGAT
AGCCCGGTTTCAAATTTTGAAGTTGGCCACGATGGATTGCTCTGGGCATAA

Peptide Sequence

PEP ID

Medtr1g088980.1
PEP Infomation

| DegP protease | HC | chr1:39969497-39960538 | 20140818
Sequence

MAVALSSYCSMFSVLSSSTVKFRYSHRHTHTPSQRPFISIRCSRTPSNSDPNFKGQNSLE
ERSTGGNVVPASFKSSRKNKDFVVDSKDQQGESSVLQDSAFLNAVVKVYCTHTAPDYSLP
WQKQRQFTSTGSAFMIGGKKLLTNAHCVEHDTQVKVKRRGDDSKYVAKVLARAAGCDLAL
LSVESEEFWRDVEPLRFGHLPHLQDSVTVVGYPFGGDTISVTKGVVSRVEVTSYAHGSSE
LLGIQIDAAINPGNSGGPAFNDQGECIGVAFQVYRSEDAENIGYVIPSTVVSHFLTDYEK
NGKYTGFPCLGVLIQKLENPALRACLKLQSNEGVLVRRVEPTSDANNVLKEGDVIVSFDD
IRVGCEGTVPFRSNERIAFHYLISQKFAGDTAELGIVRDGTSMKAKVILNPRVHLVPFHI
DEGQPSYLIIAGLVFTPLSEPLIEEEREDCIGLKLLAKARYSFARFKGEQIVILSQVLAN
ELNIGYEDMSNQQIIKFNGVRIKNIHHLAHLIDSCKNKYLCFEFEDCYAAVLEREAVAAA
SSSLLRDYGIPSERSSDLLQPYVDSQEVEGDQPPDQEFGDSPVSNFEVGHDGLLWA*

Transcript Sequence

Gene sequence data has not been registered.