Plant GARDEN
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TOP > About the Species(Medicago truncatula ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr1g080110.1
CDS Infomation

| pentatricopeptide (PPR) repeat protein | HC | chr1:35577637-35579719 | 20140818
Sequence

ATGACAACATTTTCAACCGAATTCCTCTCACACACGTTAAACTTCAGAATCCACACTTCA
AGCCATTCAAAACCCAACACAATCATCATCACTTCCTCAATTCTATTCCTAAACGAAGCC
AACAACAACAACAACAAACGAAGAAGAAGAACAAACAACAATGAACAACAACAATTCCGC
GTCAATGAAACAAAACCAACAAAACACGACCAAGACTACGATTTCCGAGACACCAATTTC
ATGAAAACCTTAAACAGATCATGCAAATCAGCTAAGTACGATGAATCTTTATACTTTCTT
CAACACATGGTTAATCGTGGTTATAAACCTGATGTTATTCTTTGCACTAAATTGATCAAG
GGTTTTTTTAATATGAAAAAGATCGAAAAAGCGATTCAGGTTATGGAGATTCTTGAGAAG
CACGGTAAGCCTGATGTTTTTGCTTACAATGCAGTTATAAGTGGGTTTTGTAAAGCTGAT
AGAGTTGATCATGCTAGTAAGGTGCTTGATAGAATGAAAAAGAGAGGCTTTGAGCCTGAT
GTTGTTACTTATAATATTTTGATTGGCAATTTTTGTGGAAGGGGCAGGCTTGATTTGGCT
TTAAGGGTTATGGATCAGTTGTTGAAAGATAATTGTAAGCCGACGGTTATAACTTATACG
ATATTGATTGAAGCAACCATTACTCAAGGTGGTATTGATGAGGCCATGAAGCTTCTGGAT
GAGATGTTGTCGAGAGGGTTGAGACCGGATAGGTATACGTATAATGTTGTTGTGAATGGT
ATGTGTAAAGAAGGGATGTTGGATAGAGCTTTTGAGTTTCTTAGTCGGATAAGTAAGAAT
GGCTGTGTTGCTGGTGTGAGTACTTATAATATTTTGTTGAGGGATCTTTTGAATGAAGGG
AAATGGGAATATGGGGAGAAGTTGATGTCTGATATGCTTGTTAAGGGTTGTGAGCCGAAT
CCTATAACGTATAGTACGTTGATTACTGCGTTATGTCGTGATGGAAAAATTGACGAGGCA
AAGAATGTGTTGAAGGTTATGAAGGAGAAAGCGCTGGCTCCTGATGGTTATAGTTATGAT
CCATTGATTTCTGCTCTTTGTAGAGAAGGAAAAGTGGATTTGGCTATTGAGTTTTTGGAT
GACATGATATCAGGTGGTCATTTGCCTGATATTCTTAGCTATAACTCAATCTTGGCATCT
TTGTGTAAGAATGGAAATGCCGATGAGGCTTTGAATATCTTTGAGAAGCTTGGTGAAGTG
GGTTGTCCTCCAAATGCAGGTTCTTATAATACATTGTTTGGTGCGTTGTGGAGTAGTGGC
GATAAAATTAGAGCGTTAGGGATGATTTTGGAGATGTTAAGTAATGGCATTGATCCTGAT
GAGATCACATATAATTCACTTATATCTTGTTTGTGCAGAGATGGATTGGTGGATCAGGCA
ATTGAGTTGTTGGTTGATATGTTTGAGAGTGAAAAGTGTCAGCCGACGGTTATTAGTTAC
AATACTGTTCTTCTTGGATTATGCAAAGTGCAAAGAATCATAGATGCTATTGAGGTGCTG
GCTGCTATGGTTAACGAAGGATGTCTGCCAAATGAAACCACTTACACATTGTTGATTCAA
GGGATTGGTTTTGCTGGATGGCGATATGACGCAATGGAGCTGGCTAACTTACTTGTTAAT
ATGGATGCAATTTCAGAAGATTCGTTCAAACGTTTTCAGAAAATATTTCCGGTGTTTGAT
GCGCACAAAGAGCTTGCTTTATCATCAGAATGA

Peptide Sequence

PEP ID

Medtr1g080110.1
PEP Infomation

| pentatricopeptide (PPR) repeat protein | HC | chr1:35577637-35579719 | 20140818
Sequence

MTTFSTEFLSHTLNFRIHTSSHSKPNTIIITSSILFLNEANNNNNKRRRRTNNNEQQQFR
VNETKPTKHDQDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIK
GFFNMKKIEKAIQVMEILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPD
VVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLD
EMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEG
KWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYD
PLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEV
GCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQA
IELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQ
GIGFAGWRYDAMELANLLVNMDAISEDSFKRFQKIFPVFDAHKELALSSE*

Transcript Sequence

Gene sequence data has not been registered.