Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr1g055295.1
CDS Infomation

| PPR containing plant-like protein | HC | chr1:24439721-24443062 | 20140818
Sequence

ATGAGAGCATTATTAAAAATCAAACTCCGATCCTATGATTCATCTTTCCTTTCACATTCT
CATCATGTTTTTCATCTTTCTACATTCTCAAATTCATCAAAACTTTCACATTCTCACAAA
ACAACAGATCAACTTTCCAATTCAGACGTTGAACCCTCACGTGCACTTTTCAACGAGATT
ACTGAGATTTTAGGTTCCGATACTGTAATCCATGATAATTCCCCATCTGGGTTTTTGTTT
CCACTCGAAATTCGTGATACCCAGTTGGGTTTTAAGGAGAAACATGATTGCACTGAACCT
GTTTGTGAAAATGCTGCAGAGAGTGTGGTACTTGATAAAGACGAAAACTTTACCGTTTTG
GAAGATAACCAGTTGGTTAAATTGGGAGAAGAAGATATGTGTCGAATGGTGGGTGAGATT
ATGGAAATAATCCGAGGTGAAAATGGTTCGGTTTCTATGGAAGAGCGATTAGAAAAGATG
GGTTATTGTGAATTGAATGTTGAGGTTTTCGATAGAGTTTTGAAAAGGTGTTTTAAAATG
CCGCATTTGGGTTTGAGGGTTTTTAACTGGTTGAAGCTTAAAGGTGGTTTTCGTCATACG
ACACAGACTTATAATACCATGTTGTGTCTTGTCGGAGAAGGTAAGGAGTTTGGGTTGGTG
AAGAAGTTGGTGGATGAAATGGATGAATGTAGAGTTCAAAAGGATGTTAATACATGGACC
ATTCTTGTGTCTCTTTATGGGAAGGCGAAGAAAATCAGTGAAGCTTTGTTGGCTTTTGAA
AATATGCAAAAGTGTGGCTGCGAACCTGATGTGGTTTCATATAGAACGATCATTCGTTTG
CTTTGTAGTTCAGGTAAGGGTGATATTGCTATGGAGTTCTATAAGGACATGGTCAAGAAG
GATATTGTACTTGATGATGTAAGGTTGTATAAGATGCTTATGAACTGTATGGCAGAATCA
GGAGATGTTGCAGCTGTTAATTTGCTTGGAAATGACATGACTCGGTTGTGTCTGATGCCG
GAAAACAGTGTTTTTGGGTGTATGCTTAAGAGCTTTTGTATTTCTGGAAGGATTAAAGAA
GCTTTGGAATTGATTCGTGACCTCAAATATAAAGATGCAGTTCTTGAACCTGAATATTTT
GAGACCTTAGTGAGAGGGCTGTGTAAGGCAGGAAGGATTTCAGACGCTTTAGAGATTGTT
GAAATTATGAAGAGAAGGGACATTGTTGTGTGGAACGTTCAAGGGATTATCATAAATGGC
TATTTACGGAGAAACGATTTTTGCATGGCACTTGATGTGTTTCAAAGCATGAAAGAATCT
GGTTATGTGCCTACAGTTTCCTCATATACAGAACTGATACAGCATCTCTTTAAGTTGAGT
AGGTATGAAGAAGCTTGCATGATGTATGATGAGATGCTGGGAAAAGGAATTAAACCAGAT
ATCGTGGCCATGACAGCCATGGTTGCAGGCCATGTTTCACAAAATCGTATATCCGAAGCA
TGGAAAATTTTCAAGAGTATGGAAAGCCAAGGTATCAAGGCTACAGGGAAATCATATTCG
GTATTTATTAAGGAGCTTTGCAAGGCTTCAAGGACTGATGACATTGTCAAAGTATTGTAT
GAAATGCGGTCTTCAAAGATTGTATTCAAAGATGAAGTATTCCGTTGGGTTATAACTTAC
ATGGAAACCAAGGGGGAGTTTGCTTTAAAAGAGAAAGTGCAGAAGATGCATGCAACAACT
ATACTCCATCCTGAAAATTTTGAGGAGTCTGAAAATCGAGTGTCATTCAAAAATGAGGTG
GAAGAAGATAGAGTTGACCAACCAAAATCAGAAAAGGTAGACTGCTCATTACTATATCCA
ATTCTCAAGACTTACAGTGAACAAGATGTTCGCGATGTCTGTAGGATTCTTTCATCCTCT
CTAGATTGGTCTTCAATCCAAGAAAAGTTAGAGATAAGTAACATCGAGTTCACCCCGGAA
TTTGTTATGGAGATAATGCAAAGCTGCAGTATGCATGGCTGCACAGTGCTAAATTTCTTT
TCCTGGGTGGGAAAGAGACCTGGTTACAGACACACCACAGAATCATACAACATTGCAATC
AAAATTGCAGGGCGCGGGAAAGATTTCAAGCACATGCGCAGCCTGTTATATGAAATGAGA
AGAAACAATTATCTAATAACATCAGAAACATGGACGATCATGATAATGATTTACGGCCGA
ACAGGTTTGACAGAGATGGCCATGAATTGTTTCAAAGAGATGAAAGATGGTGGTTATAGC
CCAAGTAGGAGTACATACAAGTATCTGATAATCGCCTTATGTGGGAGGAAAGGAAGGAAA
ATTGATGATGCTCTCAAAATATACGGTGAGATGGTTAATTCCGGACATGTCCCAGACAAA
GAATTGATTGAAACCTACCTTGGTTGCTTATGTGAAATGGGTAGGATCTTAGACGCTAGG
AAATGCATAGATTCACTTCAAAGATTTGGCTACACAGTTCCTCTTTGTTACTCCTTGTTT
ATAAGAGCTCTTTGTAGAGCTGGAAAAGTTGAAGAAGCATTGAAACTAGTTGAAGAAGTT
GGTGCAGAGAAAATTAATGTTGAAAAGCTAACTTATGGAAGTATTGTACATGGTTTATTA
CAAAAGGGTAAACTAGAAGAAGCATTAACCAAGGTGAGTAGAATGAAACAAGAGGGAATA
ACACCTACAATACATGTTTACACATCTTTAATAGTTCATTTCTTTAAACAGAAACATGTA
GAAAAAGCTATTCAGATATACGCGGAAATGCTAGAATCGGGTTATGAACCAAATGTTGTT
ACATATTCTGCACTTATACGTGGGTACATGAACGTGGGGAGGTATAATGATGCATGGAAT
GTGTTCTACCGTATGAAATTCAAAGGACCATTTCCTGATTTTAAAACATATTCTATGTTC
CTTTCTTGTCTATGCAAAGCAGGGAGATCTGAAGAAGCAATGAGACTTATTTCTGAAATG
TTGGAGAGTGGGATTGTTCCTAGTACTATTAACTTTAGAACAGTTTTTTATGGGTTGAAT
AGAGAAGGGAAACAAGGTTTAGCACGTGTTGTGTTGCAACAAAAATCAGAACTGATTAGA
AAGCGCAAGCTCATAACTTGA

Peptide Sequence

PEP ID

Medtr1g055295.1
PEP Infomation

| PPR containing plant-like protein | HC | chr1:24439721-24443062 | 20140818
Sequence

MRALLKIKLRSYDSSFLSHSHHVFHLSTFSNSSKLSHSHKTTDQLSNSDVEPSRALFNEI
TEILGSDTVIHDNSPSGFLFPLEIRDTQLGFKEKHDCTEPVCENAAESVVLDKDENFTVL
EDNQLVKLGEEDMCRMVGEIMEIIRGENGSVSMEERLEKMGYCELNVEVFDRVLKRCFKM
PHLGLRVFNWLKLKGGFRHTTQTYNTMLCLVGEGKEFGLVKKLVDEMDECRVQKDVNTWT
ILVSLYGKAKKISEALLAFENMQKCGCEPDVVSYRTIIRLLCSSGKGDIAMEFYKDMVKK
DIVLDDVRLYKMLMNCMAESGDVAAVNLLGNDMTRLCLMPENSVFGCMLKSFCISGRIKE
ALELIRDLKYKDAVLEPEYFETLVRGLCKAGRISDALEIVEIMKRRDIVVWNVQGIIING
YLRRNDFCMALDVFQSMKESGYVPTVSSYTELIQHLFKLSRYEEACMMYDEMLGKGIKPD
IVAMTAMVAGHVSQNRISEAWKIFKSMESQGIKATGKSYSVFIKELCKASRTDDIVKVLY
EMRSSKIVFKDEVFRWVITYMETKGEFALKEKVQKMHATTILHPENFEESENRVSFKNEV
EEDRVDQPKSEKVDCSLLYPILKTYSEQDVRDVCRILSSSLDWSSIQEKLEISNIEFTPE
FVMEIMQSCSMHGCTVLNFFSWVGKRPGYRHTTESYNIAIKIAGRGKDFKHMRSLLYEMR
RNNYLITSETWTIMIMIYGRTGLTEMAMNCFKEMKDGGYSPSRSTYKYLIIALCGRKGRK
IDDALKIYGEMVNSGHVPDKELIETYLGCLCEMGRILDARKCIDSLQRFGYTVPLCYSLF
IRALCRAGKVEEALKLVEEVGAEKINVEKLTYGSIVHGLLQKGKLEEALTKVSRMKQEGI
TPTIHVYTSLIVHFFKQKHVEKAIQIYAEMLESGYEPNVVTYSALIRGYMNVGRYNDAWN
VFYRMKFKGPFPDFKTYSMFLSCLCKAGRSEEAMRLISEMLESGIVPSTINFRTVFYGLN
REGKQGLARVVLQQKSELIRKRKLIT*

Transcript Sequence

Gene sequence data has not been registered.