Plant GARDEN
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TOP > About the Species(Medicago truncatula ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr1g054965.4
CDS Infomation

| carotenoid isomerase | HC | chr1:24154122-24148207 | 20140818
Sequence

ATGCTCAATTCCCCTATACTCTCCCTTTCTAACCACACCCCCATCATCTACCATCACACC
CCACCTACAAAGTTTCAATCTTTACCTTCATGTAGCTATGGAAGACCTGAATTTTCATCT
GGGTCATGCTCAAATGCTTTTAGAAGAAAAGGGGTGGTGGTGAAAGTGAAAGGGATGATG
AAGTTGGAGGAAGAAGTGGTGGAAAGTGGGAAGAGAGGTGATTTTGGTGAAGGGTTTGAT
GCAATTGTTATTGGGTCTGGGATTGGTGGGTTGGTTGCTGGGACTCAATTGGCTGTGAAA
GGTGCAAAAGTTTTGGTTTTGGAGAAGTATGTTATACCTGGTGGGAGTTCTGGGTTTTAT
CATAGGGAGGGGTATACTTTTGATGTTGGTTCTTCTGTTATGTTTGGTTTCAGTGATAAG
GGTAATCTCAACTTGATAACACAAGCATTGGAAGCAGTTGGTTGTCGGATGCAGGTAATA
CCTGATCCGACAACTGTTCATTTTCATCTACCAAACCACCTCTCTGTTCGAGTGCACAGA
GAATATGATAAGTTCATTGAAGAACTGACGAGTTACTTTCCCCACGAAAAGGACGGCATC
TTAAAATTCTATGGTGAATGCTGGAAGATTTTCAATGCTCTGAATTCGTTGGAGCTGAAA
TCGCTTGAGGAGCCACTCTACCTTTTTGGACAGTTTTTTCAGAAGCCACTTGAATGCTTG
ACATTAGCCTATTATTTGCCTCAAAATGCTGGAGCCATAGCCAGGAAGTATATTCAGGAT
CCACAGTTGTTGTCTTTCATAGATGCTGAGTGTTTTATAGTGAGCACCGTCAACGCTTTG
CAGACTCCAATGATTAATGCTAGCATGGTTCTGTGTGACAGACACTTTGGTGGGATTAAC
TACCCTCTCGGGGGTGTTGGTGGCATTGCAAAGTCCTTGGCAAAAGGTCTAGTTGATCAG
GGTAGTCAGATACTTTACAAGGCAAATGTCACGAGTATTATCACCGAGCAGGGCAAAGCC
GTAGGAGTGAGGCTTTCAGACGGCAGAGAGTTTTTTGCCAAAACCATAATATCAAATGCT
ACCAGATGGGACACATTTGGAAAGTTAGTAAAAGGAGAATCACTACCAAAAGAGGAAGAG
AACTTCCAAAAAGTTTATGTTAAAGCTCCATCTTTTCTTTCAATACACATGGGGGTTAAA
GCAGAGGTTTTACCACCAGATACAGATTGTCACCATTTTGTGCTTGAGAACAATTGGACC
AGTTTGGAGGAACCATATGGAAGTATCTTTTTGAGTATACCAACCATACTTGATTCATCA
TTAGCTCCTGAAGGTCGTCATATCCTTCATATATTCACAACTTCTTCAATGGACGATTGG
CAGGGTCTCTCAAGAATCGATTATGAGGCAAAGAAGCAGGTGGTAGCAGATGAAATCATA
AGCAGATTAGAGAAGAAATTGTTTCCAGGTCTTAGATCATCCATCGATTTTATAGAGGTA
GAACTAAAACCTCTGACCTCATTAATTTTGCTGTATATTTGCAACTCCATACATTGTTAA

Peptide Sequence

PEP ID

Medtr1g054965.4
PEP Infomation

| carotenoid isomerase | HC | chr1:24154122-24148207 | 20140818
Sequence

MLNSPILSLSNHTPIIYHHTPPTKFQSLPSCSYGRPEFSSGSCSNAFRRKGVVVKVKGMM
KLEEEVVESGKRGDFGEGFDAIVIGSGIGGLVAGTQLAVKGAKVLVLEKYVIPGGSSGFY
HREGYTFDVGSSVMFGFSDKGNLNLITQALEAVGCRMQVIPDPTTVHFHLPNHLSVRVHR
EYDKFIEELTSYFPHEKDGILKFYGECWKIFNALNSLELKSLEEPLYLFGQFFQKPLECL
TLAYYLPQNAGAIARKYIQDPQLLSFIDAECFIVSTVNALQTPMINASMVLCDRHFGGIN
YPLGGVGGIAKSLAKGLVDQGSQILYKANVTSIITEQGKAVGVRLSDGREFFAKTIISNA
TRWDTFGKLVKGESLPKEEENFQKVYVKAPSFLSIHMGVKAEVLPPDTDCHHFVLENNWT
SLEEPYGSIFLSIPTILDSSLAPEGRHILHIFTTSSMDDWQGLSRIDYEAKKQVVADEII
SRLEKKLFPGLRSSIDFIEVELKPLTSLILLYICNSIHC*

Transcript Sequence

Gene sequence data has not been registered.