Plant GARDEN
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr1g048080.1
CDS Infomation

| pentatricopeptide (PPR) repeat protein | HC | chr1:18204785-18193518 | 20140818
Sequence

ATGGAAGCTTTCAGTTTCTCATTATCCACTTCACACTTTCCCTTACACTCTAACCACAAT
CCTTCCTCCTTTTCCCTCTCTCCCGCCAAATCCATTTCCTTCTCCTTAAAACCACCTCCT
GACTCCAATAACAACTCCGCCTCTCCCACCTCTCTCCCCTTCCGCCGTCCTTCTAAACCC
CCCATTCTCAAAACTACACCCCCTCCTCCTAACCCTAAACCTAAACCTAACCCTAAACCT
TCTATCTCAAACCCTCTTAAAAACGCTTTCCATTCCTCTAATCCTCTTTCTAACAAGCTC
TGGCTCACTAGCAAAATCTCTCCTCCTCCACCACCACCACCACCACCACTACCAACTCCG
CCACCACCGTCACCGCCTGAATTGGAATCAGATGATGAAATTTTAGAAGAGGAAGTTGAT
GACGGAGAAGGTAAAAATTCCGGTTCCGATGACCGGAATCAATTCCGGCAACCGGGGAAA
ATATTTATAGGTAATTTACCAGGATGGGTGAAAAAACAAGAGGTTTCGGAGTTTTTTCGG
CAATTTGGACCGATAAATAGTGTGATTTTGATTCGAGGTCACAATGACGTTTCGAGAAAT
GCTGGGTTTGGGTTTGTGATTTATGAGGGTGAGACGGCGGAGAATTCTGCCATGAAGGCG
GTGGAATTCGACGGTGTTGAGTTTCATGGGAAAGTTTTGACAGTGAAGCTTGATGATGGG
AAGAGGTGGAGGGAGAAAAGGAGTGAGAGGGAAAAGTGGTTGAGTGGGAATGATGAGAAG
GAGTATCGGTCTGAGTGGCATGAAGAGAGGGATGGTTCTAGGAAGGAGTTTCAGAAGGTT
TTGGAAACTGAGCCGGAGAATTGGCAGGCGGTTGTTCGTGCTTTCGAGAGAGTTAACAAG
CCTGCAAGAAAAGAATATGGTTTGATGATTAAATATTATGCACGACGAGGGGACATGCAT
CATGCACGTCAAGCCTTTGAGAGCATGCGAGCCAGAGGAATTGAGCCATCTTCACATGTG
TACAGTAGTCTTATTCATGCTTATGCAGTTGGTAGAGACATGGAAGAAGCATTAAATTGT
GTAAGAAAGATGAAGGATGAGGGCATTGAAATGAGTATAGTGACCTACAGTATAATTGTG
GGCGGATTTGCTAAACTGGGCAATGCTGATGCTGCAGATAACTGGTTTAAGGAGGCTAAA
GAGAGTCTTCCATCTTTAAATGCAGTCATTTATGGGAGCATAATTTATGCACACTGTCAA
GCTTGCAAAATGGGCCGAGCTGAAGCCTTAGTGAGGGAAATGGAAGAACAGGGGATAGAT
GCTCCTATTGACATATATCATACCATGATGGATGGTTATACAATGATTGGCAATGAAGAG
AAATGCTTAATTGTGTTTGAAAGACTTAAGGAATGTGGTTTTTCTCCCTCGATTGTCAGC
TATGGTTGTCTTATTAATCTTTACACCAAGATAGGAAAAGTTTCTAAAGCATTGGAGATT
AGCAGAGTGATGAAAACTGTTGGCATAAAACATAACATGAAGACCTACTCTATGTTGTTC
AATGGTTTCGTGAAATTGAAAGATTGGGCCAATGCATTCTCCGTATTTGAAGACATTACT
AAAGATGGTTTGAAGCCTGATGTAATACTTTACAATAACATTGTAAAAGCTTTTTGTGGG
ATGGGTAATATGGATCGTGCCATTTGTATTGTGAAGCAAATGCAGAGGGAGAGGCATAGA
GCCACAACACGCACATTTTTGCCCATTATACATGGTTTTGCTAGAGCTGGAGAGACAAGG
AGAGCCTTGGAGATTTTTGATACGATGAGAAGGAGTGGCTGCATTCCCACTGTACACACA
TACAATGCTCTTATTCTTGGGCTTGTTGAGAAGTGTCAGATGGAAAAGGCTCTACAAATA
TTGGATGAAATGAATCTAGCTGGTGTTAGCCCAAACGAACACACATATACAACTCTTATG
CAAGGTTATGCTTCATTGGGTGATACTGAAAAGGCGTTTCAGTATTTCACGATATTGAAG
AATGATGGCCTGGAGATTGATGTATATACTTATGAGGCATTGTTGAAGGCATGTTGCAAG
TCAGGAAGAATGCAGAGTGCCCTAGCTGTCACAAAAGAAATGAGTTCGAAAAAGATTCCT
AGAAACACCTTTGTCTACAACATTCTAATTGATGGTTGGGCTCGGAGAGGTGATGTTTGG
GAAGCTGCAGACCTGATGCAACAAATGAGAAAGGAAGGTGTTCAACCGGATATCCATACC
TACACTTCTTTTATAAATGCTTGTTGTAAAGCTGGGGATATGCAGAATGCAACACAGGTT
ATTAAAGAAATGGAAGCACGTGGCATAAAACCAAACCTTAAAACCTACACCACTCTTATA
CACGGTTGGGCACGTGCTGCTTTTCCAGAGAAGGCTTTAAAGTGTTTTGAAGATTTGAAA
GTGGCTGGATTGAAACCAGACAGAGCAGTGTACCATTGTCTTATGACATCTTTGCTATCA
AGAGCCACCATTGCTCAATCATACATTTATAGTGGACTCTTGTCTATATGTAGAGAGATG
ATAGAATCTGAGATTACTATTGATATGGGAACTGCAGTTCACTGGTCGAGATGTTTGCGC
AAAATTGAAAGAACTGGAGGAGAACTGACTGAAGCCCTACAAAAGACCTTTCCTCCTGAT
TGGACATCGCATAATATTCTTGCTGTTAACTGTGAAATAGAAACCGCTGATCCTGAAATT
GATGTTCACGATGATATTGTATATTATTCCAGTGAAAGTGATAACGATGACTGTACTCAT
GACGAAGATTATGGTGATGAGACAGGTGATGATTTTTAA

Peptide Sequence

PEP ID

Medtr1g048080.1
PEP Infomation

| pentatricopeptide (PPR) repeat protein | HC | chr1:18204785-18193518 | 20140818
Sequence

MEAFSFSLSTSHFPLHSNHNPSSFSLSPAKSISFSLKPPPDSNNNSASPTSLPFRRPSKP
PILKTTPPPPNPKPKPNPKPSISNPLKNAFHSSNPLSNKLWLTSKISPPPPPPPPPLPTP
PPPSPPELESDDEILEEEVDDGEGKNSGSDDRNQFRQPGKIFIGNLPGWVKKQEVSEFFR
QFGPINSVILIRGHNDVSRNAGFGFVIYEGETAENSAMKAVEFDGVEFHGKVLTVKLDDG
KRWREKRSEREKWLSGNDEKEYRSEWHEERDGSRKEFQKVLETEPENWQAVVRAFERVNK
PARKEYGLMIKYYARRGDMHHARQAFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALNC
VRKMKDEGIEMSIVTYSIIVGGFAKLGNADAADNWFKEAKESLPSLNAVIYGSIIYAHCQ
ACKMGRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFERLKECGFSPSIVS
YGCLINLYTKIGKVSKALEISRVMKTVGIKHNMKTYSMLFNGFVKLKDWANAFSVFEDIT
KDGLKPDVILYNNIVKAFCGMGNMDRAICIVKQMQRERHRATTRTFLPIIHGFARAGETR
RALEIFDTMRRSGCIPTVHTYNALILGLVEKCQMEKALQILDEMNLAGVSPNEHTYTTLM
QGYASLGDTEKAFQYFTILKNDGLEIDVYTYEALLKACCKSGRMQSALAVTKEMSSKKIP
RNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVQPDIHTYTSFINACCKAGDMQNATQV
IKEMEARGIKPNLKTYTTLIHGWARAAFPEKALKCFEDLKVAGLKPDRAVYHCLMTSLLS
RATIAQSYIYSGLLSICREMIESEITIDMGTAVHWSRCLRKIERTGGELTEALQKTFPPD
WTSHNILAVNCEIETADPEIDVHDDIVYYSSESDNDDCTHDEDYGDETGDDF*

Transcript Sequence

Gene sequence data has not been registered.