Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr1g042800.1
CDS Infomation

| chromosome condensation regulator RCC1 repeat protein | HC | chr1:16011888-16018401 | 20140818
Sequence

ATGGCAGATCCTGAACGTGATATTGAACAAGCATTCATTACATTAAAAAGAGGAACCCAG
TTAGTTAAGTATAGTCGACAAGGGAAGCCGAAACTTTGTAATTTCAGGCTGTCACAGGAT
GAAACATCACTAATTTGGATTTCTCATGGAAAGGAAAAGAATCTGAAGTTGTCTTCGGTT
TTGCGCATCATCTCAGGACAGAGAACAGCTGTATTTAGAAGATATTTGCGACCTGAAAAG
GATTATCTATCATTTTCACTTATTTATAAAAAAGGCGAACGATCACTTGATCTGATCTGC
AAGGATACAGCTGAGGTTGAGGTATGGCTTTCGGGCCTTAAGGCATTAATTTCTACTGGA
CAGCTTAGAAATCGACGAACTAGAAGTGAATTAACAGATGACAGTAATGACATTTCTCCA
AATGATCGTCCTTTTGGTGGAGCACTAGAGTTTACTGCAAGTATTCCCAAGGGAAGGTTT
TCTTTTGAAGCAGTTCCTCGTGAATCCACATCGAATAGAAGATCTGATGCGGGGTCAGAG
CATACAAGTATGGCGCCAGTAAGGACAAGTGTTGGAGATGGTTCCCGTGTTAGTGTATCA
AGTACTAACTATGCTAGTAGTGTAGTATCAGGACCAGATGACATAGAGTCTCTTGGTGAT
GTTTTTATATGGGGAGAGGTTTGGGCTGAAGGCAATTCCTCCGATGGATTAGGGAGTCAA
GTCCCTTCCAAGATAGACATGTTGATTCCCAAGCCATTGGAATCTGATGTTGTTCTTGAT
GTTAATTATATAGAACCCGGTGTAAGTCACATTGCTCTAGTAACAAGGCAAGGTGAGATT
TTTACCTGGGGAGAGGACTCTGGTGGAAGACTTGGTCATGGGTTTGATAAAGATTATGGT
AAACCCCGTCTTGTTGATTCCCTAGCCATTACTAGTGTGAGTTTTGTTGCTTGTGGTGAA
TATCATACATGTGCAGTATCTATATCCGGGGATCTATACACCTGGGGTGATGGTACACAT
AACGCGGGAATTCTAGGTCATGGAACTGATGTTAGCCACTCCATACCAAAGAGGGTCACT
GGCCCTTTAGAAGGACATCAGGTTGTATCTATAGCATGTGGTGCATGGCATACGGCATTG
ATAACTTCCAATGGGAAACTTTTTACCTTTGGCGATGGAACGCTTGGTGTCTTGGGGCAT
GGAGACAGAGAGAGTGTGGCATATCCAAAGGAGTTACAGTTATTGAGTGGACATAAAGCT
GTTAAGGTTGCATGTGGAGTGTGGCACACAGCAGCAATTATAGAGGTTAATGATCAATCT
GGTTCAAGTTCAAATACTTCTTCGTCAAAGAAACTATTCACGTGGGGTGATGGAGACCAA
TATCGTTTAGGTCATGCTAACAAGGAAACTTACCTTCAACCAACTTGTGTGGCTGCACTT
GCTGATTATAATTTTCTACAGGTTGCATGTGGACATAGTTTGACCGTTGCGCTAACCGCA
TCCGGTCATGTTTTTACTATGGGGAGCAAGGCGTATGGTCAACTAGGAAATCCAACCTCC
GATGGAAAAGTGCCGATTCTAGTAAGAGATAAATTACAAGGAGAAACTGTTGAGGAAATA
TCGTGCGGCACACATCATGTTGCTGTATTGACTTCAAGAAGTGAACTATATACTTGGGGG
AGAGGTGCCAATGGAAGATTAGGGCATGGAGACATAGAAGATCAGAAAACTCCAATATTG
GTGGAAGCTTTGAAAGAAAGGCATGTAAAAAATATCGCATGTGGCGCAAATTTTACAACT
TGTATATGCATACATAAGTGGGTTTCAGGGAATGATCAATCGGTTTGCTCCGGTTGTAGA
CAGCCATTTGGTTTTACTAGAAAAAGGCATAATTGTTATCATTGTGGATTGGTGTATTGC
CATCCTTGTAGTTCAAAAAAGGCGCTGAAAGCAGCATTGGCTCCAACGCCTAGCAAACCG
CATCGTGTTTGTGATGCTTGTTATGCTAAACTTAAAGGTTGCGAGAATAGTAATGCTTCC
CATTTCAATAAAGAAATTACCCGTCCTTCTAGTTCCGTGTATGGAAGGGAAAAAACTGAG
AGGGTTGAGGTAAGACCTTCAAAATTTCTCCTGTCTTCTGCCACATGTCTAGTGAAATCC
CTTGGAAGTACACATGAATCATCTTCCATGGCCGGAGACGCGTTACAATTGAAAGATATC
ATATTTCCTGGTCCATCAAGTGCAACGCAGAAAGCTTCCAGGGCTCTTATTATGCAGCAA
AGCCAGGCTCCAACTCCACCTCCATCAGCTAATTCAAGACCAGCCTCGCCATATTCTAGA
AGACCGCCTAGCCCGACACGGTCTGTCTCCCCTGGATTTTCAAGAAGTCTTATTGATAGT
TTAAAGAAGAAAAATGAGCACCTGAATCAAGAAGTTTCAAAGTTGCAGAACCACATTCGA
AGTTTAAAGCAAAAGGGTGACATGCAAGATATAAAGATTCGGGAGCTTCAAAAAAATATC
GAGGAAGCCAATCTATTGGCTGGAGAGGAATCTTCTAAGCATAGAGAAGCAAAGGAATTC
ATCAAGTCTATAACAGAAGAGTTGAGCGAAGTGACTGAAAAGTTGCCACCAGAGATTCCC
GGCAGTGAAACCTTGAAAGTGATCCATGCTCAAGCTCAAAATCTTCTCAAAGAAAATTTA
GAATTTGAATCTTCCTTCCAACCGAGTTTCGAGTCTGAGCAACAACGTGCGCCTGATATA
CCAGCATCAGATGGTGACTCTTCAAACCTGCAAGAGCAAAGACTGGAAGGAAACAATGAA
GTTTCTGAGGTTGTTCGATCAACAAATGGAGCAGATGATCGTCAAGAAAGCAGTAGCAGC
TCGTATTTATCAACTAATGCAGTCTCTCCACCAAACTCGGAAAATAGTATCAGATCACAG
GAGTCGTCCAGGCCTGTGAGAGAAGGAGAAACATCGGTCATTGAACAATTTGAACGCGGT
GTTTATATCACAGCCATAGTAATAGCTGATGGCAGCAAAATTTTCAAACGTGTTAGATTC
AGTAGGAGAAGATTCAGTGAGCAACAAGCAGAAGAATGGTGGAGCAATAACAAAGATAGG
GTGTATAGAAGATATAACCCACCACCTATAAATAATGAAAGTATTGATTCATCTAGCACC
CCACCTCATGGCGAAAAAAATGTTGAAGCAGCCTCAATCAACCAAGTGTAG

Peptide Sequence

PEP ID

Medtr1g042800.1
PEP Infomation

| chromosome condensation regulator RCC1 repeat protein | HC | chr1:16011888-16018401 | 20140818
Sequence

MADPERDIEQAFITLKRGTQLVKYSRQGKPKLCNFRLSQDETSLIWISHGKEKNLKLSSV
LRIISGQRTAVFRRYLRPEKDYLSFSLIYKKGERSLDLICKDTAEVEVWLSGLKALISTG
QLRNRRTRSELTDDSNDISPNDRPFGGALEFTASIPKGRFSFEAVPRESTSNRRSDAGSE
HTSMAPVRTSVGDGSRVSVSSTNYASSVVSGPDDIESLGDVFIWGEVWAEGNSSDGLGSQ
VPSKIDMLIPKPLESDVVLDVNYIEPGVSHIALVTRQGEIFTWGEDSGGRLGHGFDKDYG
KPRLVDSLAITSVSFVACGEYHTCAVSISGDLYTWGDGTHNAGILGHGTDVSHSIPKRVT
GPLEGHQVVSIACGAWHTALITSNGKLFTFGDGTLGVLGHGDRESVAYPKELQLLSGHKA
VKVACGVWHTAAIIEVNDQSGSSSNTSSSKKLFTWGDGDQYRLGHANKETYLQPTCVAAL
ADYNFLQVACGHSLTVALTASGHVFTMGSKAYGQLGNPTSDGKVPILVRDKLQGETVEEI
SCGTHHVAVLTSRSELYTWGRGANGRLGHGDIEDQKTPILVEALKERHVKNIACGANFTT
CICIHKWVSGNDQSVCSGCRQPFGFTRKRHNCYHCGLVYCHPCSSKKALKAALAPTPSKP
HRVCDACYAKLKGCENSNASHFNKEITRPSSSVYGREKTERVEVRPSKFLLSSATCLVKS
LGSTHESSSMAGDALQLKDIIFPGPSSATQKASRALIMQQSQAPTPPPSANSRPASPYSR
RPPSPTRSVSPGFSRSLIDSLKKKNEHLNQEVSKLQNHIRSLKQKGDMQDIKIRELQKNI
EEANLLAGEESSKHREAKEFIKSITEELSEVTEKLPPEIPGSETLKVIHAQAQNLLKENL
EFESSFQPSFESEQQRAPDIPASDGDSSNLQEQRLEGNNEVSEVVRSTNGADDRQESSSS
SYLSTNAVSPPNSENSIRSQESSRPVREGETSVIEQFERGVYITAIVIADGSKIFKRVRF
SRRRFSEQQAEEWWSNNKDRVYRRYNPPPINNESIDSSSTPPHGEKNVEAASINQV*

Transcript Sequence

Gene sequence data has not been registered.