Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr1g014680.1
CDS Infomation

| ubiquitin carboxy-terminal hydrolase | HC | chr1:3486908-3492992 | 20140818
Sequence

ATGCTTGTAATCGCTGGTGTATCGTGGGATCTCAATCGATTCCTTCAATTCATATTCACC
GCTCTTGTAATCGCTATTGGATTACACACTCTTGTCAAAAACACCGCTTCTAAATACTTC
GAAGTCGACGCTAATTTCGAAGGAGATCATCATCCTTCTTCTCCCACCTCCCCAATGCCC
GGTGTTCTTAACTCCGATGAGCCTGTTTGTGCTGTTTGTGCTTCTCATGCCACCAAGAAG
TGTTCGCGCTGTAAAGGCGTTCGATATTGCACAACAAAATGTCAACAGTCACATTGGAAT
TCCGGGCATAAGGAGAAATGCAAAAGTAATAGTGGTGCCAATGTATTTAACTCGGCTTCA
AATGGGGCAACTAATGGTGGGTTTAAGGCTTCTGCTGCTGGGGGTAAAGGATCAAATTTG
ATTGCACTGGTACCTGGTGGTTACAGTACTTCGAGGCCTATCAAGAAGCCTAAAGATGTT
CTTTTTCCTTATCATGAATTTGTTAAACTATTTAACTGGGACAACCCGGGATTTCCTCCT
TGTGGACTCTTGAATTGTGGAAACAGTTGTTTCGCGAATGTGGTTCTTCAGTGTCTCTCA
TTCACAAGGCCACTTGTTGCCTACTTGTTGGAGAAGGGCCACCGAAATGAATGCACTTGC
AATGATTGGTGCTTTCTATGTGAGTTTGAAAGTCATGTTGAAAGAGCAAGGCTAAGTTCA
CAGGCGTTTTCTCCAATGAATATTCTCTCTCGTTTGCCTAATATCGGTGGTACTTTAGGT
TATGGAAGACAAGAGGATGCTCACGAGTTCATGAGGTTTTCAATTGATACTATGCAATCT
GTTTGCCTTGATGAATTTGGTGGAGAAAAAGCTGTCCCTTCTAACCTTCAGGAGACAACC
ATTATCCAACACATTTTTGGTGGTCGCCTTCAATCTGAGGTTATTTGCACAAAGTGTGAT
AAGACTTCAAATCAGTATGAAAGTATGATGGACTTGACAGTTGAAATTCATGGAGATGCT
GCCTCGTTGGAGGAATGTCTAGATCAGTTTACTGTTAAAGAGTGGCTTGATGGGGAAAAT
ATGTATAAATGCGAGGGGTGTCAGGACTATGTAAAGGCGTGGAAACGTCTTACTGTAAAA
TGTGCTCCAAATATTCTTACAATTGCCTTGAAAAGATTTCAGAGTGGGAGGTTTGGAAAA
CTTAACAAGAGAGTAGCCTTCCCTGAGACTTTAAATCTTAGCCCTTACATGAGTGAAGCT
GGAGATGGATCTGATATCTATAATTTATATGCTGTTGTAGTCCATATTGATATGCTAAAT
GCTTCATTTTTTGGTCATTACATCTGCTACATCAAGGATTTCCGGGGAAACTGGTATAGG
ATTGATGACTCAAAGGTTGTTTGTGTGGAATTGGAGGAGGTGCTTTCTCAGGGAGCATAC
ATGCTGTTGTATAGAAGGTGTACTGCCCGACCATCAAGCCTTCAAATTCAAACTACTGAA
TCTTCAGGGAAAGTAGAAGAGCGAACAGTGGAAGTGGAACCTGGCAAAACTGAACAAGCT
GAATGCCTCTCAAATGTGAAGGCTTTGGTTTGCAATAGAGATTGTGAGGTTTCACCGTCT
GATATTAGTCCAGAATCAAAGGTTTCTTCTGGTGATGAATATGAGTCCTCCATTGAATTG
AACTCAGAAGCTAAAAGAGAGCAGTCTGAGGACACACTCTCAAACGTGAAGGTGTTGGCT
TGCAGTAGAGATTGTGAGATTTCACCATCTGATATTAGTCAAGAATTGAAGGTTTCTTCT
GGTTATGAATACGAGTCCTCCGTTCAATTGAACTCTGAAGCTAAAAGAGAGCAGTCTGCG
GACACACTCTCAAATGTGAAGGCTTTGGCTTGCCGTAGAGGTTGTGAGGTTTTACCATCT
GATATTAGTCCAGAATTGAAGGTTTCTTCCGGCTATGATTACGAGTCTTCTGTTGAAGTG
AACTCAGAAGCTAAAAGAGAGCAGTCTGAGGACACAAACATGATTGATATTGAGTCAACT
GATAATGGTAATGACATTTCTTATAGTGCTGTTGATGAATCTTCTTATTTACCCATTTCT
CATGTTGTCGAAAATTTGATGGATGTGGATATGGGAAGACCTATAGAAGAGACTTCAGGC
TGCGCCCAAGATCAAGATGATACTGGTGTGGCTGGATCTTGTCCTTCTCCAGGTTTACCA
AATGATTTTTCTTTCTTGGATAAGCATTCTTCTGTTTCAATAGATTATCGAAATGTGGAG
GAAGATTTGGAAGATACAGACGCGGTTAAATGCAAGTTGCTAACAGCTAACAATGATGCA
TATTATGGCAATGGATATGTTAGTGCAAACCTATCTGCTACTCCACATGAAGATACTGGT
ACTCTATTTTCCAGTGGTGCTTCCTTTCCCACAGAAAAGGACAGAGGAAATGGAATTAAG
AAAGTGGAAATATCAGCGGATAAGTTAATAATGTAG

Peptide Sequence

PEP ID

Medtr1g014680.1
PEP Infomation

| ubiquitin carboxy-terminal hydrolase | HC | chr1:3486908-3492992 | 20140818
Sequence

MLVIAGVSWDLNRFLQFIFTALVIAIGLHTLVKNTASKYFEVDANFEGDHHPSSPTSPMP
GVLNSDEPVCAVCASHATKKCSRCKGVRYCTTKCQQSHWNSGHKEKCKSNSGANVFNSAS
NGATNGGFKASAAGGKGSNLIALVPGGYSTSRPIKKPKDVLFPYHEFVKLFNWDNPGFPP
CGLLNCGNSCFANVVLQCLSFTRPLVAYLLEKGHRNECTCNDWCFLCEFESHVERARLSS
QAFSPMNILSRLPNIGGTLGYGRQEDAHEFMRFSIDTMQSVCLDEFGGEKAVPSNLQETT
IIQHIFGGRLQSEVICTKCDKTSNQYESMMDLTVEIHGDAASLEECLDQFTVKEWLDGEN
MYKCEGCQDYVKAWKRLTVKCAPNILTIALKRFQSGRFGKLNKRVAFPETLNLSPYMSEA
GDGSDIYNLYAVVVHIDMLNASFFGHYICYIKDFRGNWYRIDDSKVVCVELEEVLSQGAY
MLLYRRCTARPSSLQIQTTESSGKVEERTVEVEPGKTEQAECLSNVKALVCNRDCEVSPS
DISPESKVSSGDEYESSIELNSEAKREQSEDTLSNVKVLACSRDCEISPSDISQELKVSS
GYEYESSVQLNSEAKREQSADTLSNVKALACRRGCEVLPSDISPELKVSSGYDYESSVEV
NSEAKREQSEDTNMIDIESTDNGNDISYSAVDESSYLPISHVVENLMDVDMGRPIEETSG
CAQDQDDTGVAGSCPSPGLPNDFSFLDKHSSVSIDYRNVEEDLEDTDAVKCKLLTANNDA
YYGNGYVSANLSATPHEDTGTLFSSGASFPTEKDRGNGIKKVEISADKLIM*

Transcript Sequence

Gene sequence data has not been registered.