Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr1g009650.1
CDS Infomation

| pentatricopeptide (PPR) repeat protein | HC | chr1:1414912-1421469 | 20140818
Sequence

ATGCTTCTAACTCACGCTTTCTCTTCAATCCATTCTTCATACATTCCCATTTCTTCGTGT
TCTTCATCTTCTCCAATACGACGTCGTTTATTTACCACTCCTCGCAAAACGAATCTGAAA
CACCTCACTTCACGAATAGTTCAACTAAGTCGCCGAAAACAGCTTCGCCAGATTCTGAAT
GAAATTGAAGTTGCAAAGAAACGTTTTGGAAAATTGAACACGATTGTGAAGAATGCGGTT
ATGGAAGCTTGTGTTCGTTGCGGTGATATTGATTCAGCTCTTAACATTTTTGATGAGATG
AAGAATCCTGATGCTTGTGGTGTTGATACTGTCACCTATGCCACGCTTTTGAAGGGTTTA
GGCAAGGCACATAGATTTGATGAAGCTTTTAGATTGCTTGAATCTGTCGAAAATGGTACT
GCCGTGGGAAATCCAAAGTTGTCAGCACCATTGGTCTTTGGTTTACTAAATGCCTTAGCA
GAAGCAGGAGACCTGCGTCGTGCAAATGGCCTCCTTGCCTGTTATGGTTCTGTGCTTCGT
GAAGGCGAACATTTTTCAGTCTCAGTATACAACCTTCTAATAAAGGGGCATATAAACTCA
GGCTGTCCTCATACTGCAATAAACATGCTCAATGAAATTTTACATCAAGGAATAATGCCT
GACAGGCTCACATATAACACACTAATTTTAGCATGTGTTCAGAGTGAAAAGTTGGATGTT
GCCATGCAATTATTTGGGGAAATGAAGGAAAAAGCGCAGGAATTCATCCATGATGATCTG
TTTCCAGATATCGTTACATACACAACATTGCTCAAGGGTTTGGGGCAGGCAAAGGATCTC
GTTTCAGTTATGCAAATAGTGCTGGAGATGAAATCATGTTCTCAGTTATACATTGACAGA
ACTGCTTACACTGCAATAGTTGATGCTTTACTAAAATGTGGCTCAGTTAAGGGTGCTCTG
TGTATTTTTGGAGAAATACAGAAACAGGTTGGTTGGAATCCAGAGTTGAGACCGAAGCCT
CATCTCTATCTTTCCATGATGCGTGCCTTTGCTTTTAGAGGAGATTATGATCTGGTTAAA
AATTTGCATAAGCGGATTTTGCCAGATACTTCAGGAACAATCTTACCGGTTTCCCAAGAA
GAAGCTGACCACCTTCTAATGGAAGCAGCCCTGAATGCTGGCCAGGTTGATGTCGCTACT
AAAACTCTTATGTATATTGTTTCAAGATGGAAGGGCATATCCTGGACGAGTCATGGAGGC
ATGGTTGCTTCTCGTATTGAGGCCTTGTCAGGATTCTCAGCATCTTTATTCAATCCTTTC
TTACTTCCCCAGGTTTCACCTTCTGAACCGATTGAGGGCTTCATGATGCCATTTAAAGCA
ACACGGCCCCTACTAGGTACCATAAAGCTGAAGGATGTGGTATCACGTTTCTTCAATGAT
GCAGTAGTTCCTATTGTAGATGAGTGGGGAAGCTGTACAGGGCTTTTGCACCGCAAAGAC
TGCACTCAGTTGGATGCTCCGCTTTCAACAATGATGAGAAGCCCTCCTCCCAGTGTTGCA
GCTTCAACATCTGTTGGTCATGTAATTGATTTAATTTTGGAGAAGGGTTACCCAATGGTT
ATCATTTTAAATTGCACCGACTCGTATGCTACTTCATACGGCTGTAGAGCAGTTGGAGTT
TTTACATTAGAACAACTGAATAGGCTCATCAAACCTGTATCTGAAGTGAAAGAGACAGAC
CTTTCACTCTGGCAAGTTTATTGCCTAATCGAGCCAAAAGTAGCTCAAGACAAGAAGCTC
CTCGTAGCTGCGCAAGCTAAGGAATTGTCAAAAGAGGTTGAACTATTTGATGAAGATTTT
GAGGATGTGAGTTGTCCTATAGAAGAAGGGAAGACGAAGGAAGAATCAACCGTTTTATAA

Peptide Sequence

PEP ID

Medtr1g009650.1
PEP Infomation

| pentatricopeptide (PPR) repeat protein | HC | chr1:1414912-1421469 | 20140818
Sequence

MLLTHAFSSIHSSYIPISSCSSSSPIRRRLFTTPRKTNLKHLTSRIVQLSRRKQLRQILN
EIEVAKKRFGKLNTIVKNAVMEACVRCGDIDSALNIFDEMKNPDACGVDTVTYATLLKGL
GKAHRFDEAFRLLESVENGTAVGNPKLSAPLVFGLLNALAEAGDLRRANGLLACYGSVLR
EGEHFSVSVYNLLIKGHINSGCPHTAINMLNEILHQGIMPDRLTYNTLILACVQSEKLDV
AMQLFGEMKEKAQEFIHDDLFPDIVTYTTLLKGLGQAKDLVSVMQIVLEMKSCSQLYIDR
TAYTAIVDALLKCGSVKGALCIFGEIQKQVGWNPELRPKPHLYLSMMRAFAFRGDYDLVK
NLHKRILPDTSGTILPVSQEEADHLLMEAALNAGQVDVATKTLMYIVSRWKGISWTSHGG
MVASRIEALSGFSASLFNPFLLPQVSPSEPIEGFMMPFKATRPLLGTIKLKDVVSRFFND
AVVPIVDEWGSCTGLLHRKDCTQLDAPLSTMMRSPPPSVAASTSVGHVIDLILEKGYPMV
IILNCTDSYATSYGCRAVGVFTLEQLNRLIKPVSEVKETDLSLWQVYCLIEPKVAQDKKL
LVAAQAKELSKEVELFDEDFEDVSCPIEEGKTKEESTVL*

Transcript Sequence

Gene sequence data has not been registered.