Plant GARDEN
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TOP > About the Species(Medicago truncatula ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Medicago truncatula

CDS Sequence

CDS ID

Medtr0172s0010.1
CDS Infomation

| DNA topoisomerase type I | HC | scaffold0172:9308-1932 | 20140818
Sequence

ATGGCTCAACCAAACTTGTCTAAAAAATTTGATGACTACGACGACGACGATGATGATGAT
GATCAGCCGATAACTTTCAAAAGATTCGCTAAGAAGAGTCCGTTGCATTCTGAAGTAAAG
AAAGCAACTTCTAACAGTCATGGAGGACAGTCAAATGGAAAGATTACTGATGTCCATTCT
TCAAATGGCCAAACTTCTAAGCCGTCACCCATGAAACCTTGTGCAGGAATCGCAAAACAA
TCGAATTCGCCTTCATTAGGGGATAAACCAAATATTGTTAATGTGAAGAATGAAACGAAA
CCTATCGAACACTCTAGTAAAGGTTATTGTGAAGATTCAGAGGATGACGATGATGATAAA
CCATTGAGTTCTAAGTGGAAGATCAAATCTAATCATGATAACAAAGTTGTAGCTCCTGTT
GTTATCAAGAAATCTTCTCAAGACTCGGATGATGATGATGATGATGTCCCTCTGTCAGCA
AAGTTCTTACGGAAACCTAATTCGAGAACATCCGATAAGAAGCCTGTTTCAAAAGTTCAG
AAAGAGCGGCAAAATGGTTCCAGCACTAGTAGTAAACAGCAAAAGTCATCTACACTACCA
GTTAAGAGAGAACTAGAAAATTGTGATTCCGTGCACTCTTCGGTTAAGAAATCAAAGGTC
TCGGATTCAGCTGCTTCAATCAAAACTAAGCAAGTTTCTGTCAAGTGTGAGCTTAAGGCT
AAGGAGGAAGAAGATGACGATGATGATAAACTTCCCATTTCCCACTCTTCAGTTAAGAAG
CCAAAGGTCTCAGATTCAGCTGGTTCAATCAAAACTAAGCAAGTCTCTGTCAAGTGTGAG
ATTAAGGCTAAGGAGGAAGAAGATGACGATGATGATGAACTTCCCATTTCCCACAGATTC
AAGAAGTCACCAAAATTAACCGATAAACCATCTTCCACTAAGAAGATATCGACAAAAGTT
ACTAAAGTGAATAAGTCTGGTTCAACATCTTTTAAGAAACAGACCAAGAGCAAACAGACC
AAGAACAAGTCTAAACGATCAGGCAGAGACTCGGAATATTCCATATCTTCAACACTTCTT
CCTAGCTCTGGTGATGGGCAGAAAAAATGGACTACGTTGGTTCACAATGGTGTCATTTTC
CCTCCTCCTTACCAGCCCCATGGAGTAAAAATTCTTTATAAGGGGAAGCCTGTTGATTTG
ACTCCTGAGCAAGAGGAGGTTGCTACAATGTATGCAGTTATGCGAGATACAGATTACATG
CAGAAAGATAAGTTCAAGGAGAATTTCTGGAATGACTGGCGAGAGGTGCTAGGAAGAAAG
CATGTAATTCAGAACTTGAAAGATTGTGACTTCACCCCAATCTATGACTGGCACGAAATT
GAAAAGGAAAAGAAGAAACAAATGACTACAGAAGAGAAGAAAGCTCTGAAAGAAGAAAAG
ATGAAGCAAGAGGAGAAATACACGTGGGCTATTGTCGATGGTGTTAAAGAGAAGGTTGGA
AATTTCAGAGTTGAACCTCCAGGATTGTTCCGTGGCCGTGGAGAGCATCCCAAGATGGGA
AAATTGAAAAAACGCATTCATCCAAGTGACATCACAATTAATATTGGAAAGGATGCACCA
ATTCCTGAATGTCCCATTCCGGGTGAATGCTGGAAGGATATAAGACACGACAATACAGTT
ACATGGTTATGCTATTGGAATGACCCAATTAATTCAAAGCTATTCAAGTATGTGTTTCTG
GCAGCTAGTAGTTCCTTGAAGGGTCAAAGTGACAAGGAAAAGTACGAGAAGGCTAGGTTG
TTGAAGGATTATATAGAGAACATCAGGGCTGCCTACACGAAAGATTTTACGAGTAAGGAT
ATTACAAAGCAGCAGATAGCTGTTGCTACTTATCTTATTGATAAACTGGCTCTGAGGGCT
GGTAATGAGAAGGATGACGATGAAGCTGATACTGTTGGCTGCTGCACATTAAAAGTAGAG
AATGTGACAAGAGAAGCCCCCAACAAATTGATGTTTAACTTCCTTGGTAAAGATTCAATC
AAGTATGAAAATACAGTTGAGGTTGAACTTCCTGTTTATAATGCAATTTTGAAGTTCCAA
AAAGATAAAAGCCCTGGTGAAAGTCTCTTTGATATGCTGGATACAAATAAATTAAATACT
CATCTGAAGGAACTCATGCCCGGCTTAACAGCAAAAGTCTTCCGTACATTCAATGCATCT
ATCACATTAGATGATAAGTTGAATAAGGACACTAAAGATGGTGATGTTGCAGAAAAGATT
GTTGTTTATAATCATGCAAATAAAGAGGTTGCAATTATCTGTAATCATCAACGGAGTGTT
TCAAAATCTCACAGTCAACAAATGACAAAATTAAATGAGAAAATCGACGAACTTCAGGCT
GATCTGAAGGAGCTGAAAGTAGATTTGGACAGGGCAAGGAAAGGAAAACCCCCTACAAAG
AGTTCAGATGGAAAAAGCAAACGGAACTTAACTCCCGAAGCGTTAGAGAAAAAGATAACT
CAAACCAATGCAAAAATTGAGAAAATGCAACGTGATATGAGGACAAAAGAAGATCTTAAA
ACTGTAGCATTAGGCACATCCAAGATAAACTACCTCGACCCCAGGATTACAGTTGCCTGG
TGCAAGCGGCACGAGGTTCCCATTGAAAAGATGTTCACCAAATCTCTGCTGGCAAAATTT
GCTTGGGCAATGGACGTGGACCCTGACTTTAGATTCTGA

Peptide Sequence

PEP ID

Medtr0172s0010.1
PEP Infomation

| DNA topoisomerase type I | HC | scaffold0172:9308-1932 | 20140818
Sequence

MAQPNLSKKFDDYDDDDDDDDQPITFKRFAKKSPLHSEVKKATSNSHGGQSNGKITDVHS
SNGQTSKPSPMKPCAGIAKQSNSPSLGDKPNIVNVKNETKPIEHSSKGYCEDSEDDDDDK
PLSSKWKIKSNHDNKVVAPVVIKKSSQDSDDDDDDVPLSAKFLRKPNSRTSDKKPVSKVQ
KERQNGSSTSSKQQKSSTLPVKRELENCDSVHSSVKKSKVSDSAASIKTKQVSVKCELKA
KEEEDDDDDKLPISHSSVKKPKVSDSAGSIKTKQVSVKCEIKAKEEEDDDDDELPISHRF
KKSPKLTDKPSSTKKISTKVTKVNKSGSTSFKKQTKSKQTKNKSKRSGRDSEYSISSTLL
PSSGDGQKKWTTLVHNGVIFPPPYQPHGVKILYKGKPVDLTPEQEEVATMYAVMRDTDYM
QKDKFKENFWNDWREVLGRKHVIQNLKDCDFTPIYDWHEIEKEKKKQMTTEEKKALKEEK
MKQEEKYTWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIHPSDITINIGKDAP
IPECPIPGECWKDIRHDNTVTWLCYWNDPINSKLFKYVFLAASSSLKGQSDKEKYEKARL
LKDYIENIRAAYTKDFTSKDITKQQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVE
NVTREAPNKLMFNFLGKDSIKYENTVEVELPVYNAILKFQKDKSPGESLFDMLDTNKLNT
HLKELMPGLTAKVFRTFNASITLDDKLNKDTKDGDVAEKIVVYNHANKEVAIICNHQRSV
SKSHSQQMTKLNEKIDELQADLKELKVDLDRARKGKPPTKSSDGKSKRNLTPEALEKKIT
QTNAKIEKMQRDMRTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKMFTKSLLAKF
AWAMDVDPDFRF*

Transcript Sequence

Gene sequence data has not been registered.