Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Glycine max

CDS Sequence

CDS ID

RCW19403
CDS Infomation

cds chromosome:Glycine_max_v2.1:5:33756641:33762577:-1 gene:GLYMA_05G143800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAAACTTTCTTCATCGGGTTTTAGTTCTCCACCTCAGGAAGGAGAAAAGCGAGTTCTA
GATTCAGAACTTTGGCATGCTTGTGCTGGTCCTCTTGTTTCTTTACCAGCTGTTGGAAGC
CGAGTGGTATACTTTCCACAAGGTCACAGTGAACAGGTTGCTGTGTCTACCAACAGGGAA
GTGGATGGCCATATACCTAACTATCCAAGCTTACCACCGCAGCTTATTTGTCAACTTCAT
AATGTGACTATGCATGCAGATACTGAGACAGATGAAGTGTATGCTCAGATGACCTTGCAA
CCTCTTAATCCTCAAGAACAGAAGGAGGCATACCTTCCAGCTGAGTTGGGCACACCGAGT
AAACAGCCAACAAACTACTTCTGCAAAATTTTGACAGCCAGTGACACTAGCACTCATGGG
GGATTCTCTGTTCCTCGCAGGGCAGCTGAAAAAGTTTTTCCTCCATTGGACTTTTCACAA
CAGCCTCCTTGTCAAGAGTTAATTGCAAGGGATTTGCATGGTAATGAGTGGAAATTTAGA
CATATCTTCCGTGGCCAGCCCAAAAGGCATCTACTTACAACAGGATGGAGTGTCTTTGTG
AGTGCTAAAAGACTTGTTGCTGGTGATTCAGTGCTGTTTATCTGGAATGAAAAGAATCAA
TTGCTTCTTGGCATTCGGCGGGCTAATCGACCTCAACCAGTGATGCCTTCATCAGTGTTG
TCAAGTGATAGCATGCACTTGGGGCTTCTTGCTGCTGCAGCTCATGCGGCTGCAACTAAT
AGTCGTTTTACCATCTTTTATAACCCACGTGCTAGCCCATCAGAATTTGTCATACCTTTT
GCAAAGTATGTTAAAGCCGTGTATCATACTCGAGTTTCAGTTGGTATGCGCTTCAGGATG
CTGTTTGAAACAGAGGAATCCAGTGTGCGTCGATACATGGGCACAATAACTGGCATTAGT
GACTTGGATTCAGTCCGGTGGCCAAATTCACATTGGCGCTCAGTCAAGGTTGGCTGGGAT
GAATCCACAGCAGGAGAGAGGCAACCTCGAGTGTCTTTATGGGAAATTGAGCCATTAACA
ACATTTCCAATGTATCCATCTCCATTCCCCCTTAGGCTTAAGAGACCGTGGCCTCCAGGA
CTGCCTTCATTCCATGCAGGCTTGAAGGATGATGATTTTGATATGTACCAAGCTATGGCT
GCCGCTGCACTTCAGGATATGTGGACTTCAGATCCTTCCAAACAGCATCCTACGTCCGCA
ATTCAATTTCAGCAACAGCAGAACTTCCCCAACAGGACTTCTGCCTTAATGCAAACCCAA
ATGTTGCAGCAGTCTCAACCTCAGCAGGCTTTTCCAAATAGTCAAGAAAATTCACATCCA
TCTCCATCTCCATCTCAATCTCAGGCTCAAACTCAAACACACTTTCAGCAGCATCTACAG
CATCAGCACTCATTCAATACTCAGAATCAGCATAATCTTCTGCAGCAGCAGCAACAATCG
CAATTGCAACAGCAACAAGTGGTAGATCATCAGCAGATTTCAAGTGCCGTCTCTACAATG
TCTCAGTTTGTTTCAGCACCTCAGTCTCAATCACCACCAATGCAAGCTATCTCTTCACTT
GGCCATCAGCAAAGCTTTTCTGATTCAAATGGGAACCCTGTGACTACTGCTGTTGTTTCT
CCCCTGCATAGTATATTGGGTTCATTTCCCCAGGATGACACATCTCACCTTCTCAACCTT
CCTAGATCCACCTCTTGGGTTCCTGTTCAACATTCAACTGCATGGCCGTCCTCCAAGCGT
GTTGCAGTGGATCCTCTCTTTTCTTCTGGAGCATCTCAATGTGTTCTACCTCAAGTGGAG
CAGTTAGGGCAGCCACAGAGTACCATGGCTCAAAATGGCATTGCATTGCCACCCTTTCCT
GGTAGGGAGTGTACAATAGAAGGAAGCAATGATCCACAAAATCATCTTTTGTTTGGTGTC
AATATAGAGCCCTCATCACTCCTAATGCATAATGGGATGTCAAGTCTTAAGGGAGTCAGC
AGCAACAGTGACTCACCCACCATACCTTTTCAATCATCTAATTACCTGAACACCACAGTA
CCTGATTCTTCATTGAATCCTGGAATGACACACAATATTGGTGAATCGGGCTTCCTGCAA
ACTCCAGAAAATGGGGGGCAAGGAAACCCAACTAACAAAACCTTTGTGAAGGTTTACAAG
TCAGGGTCCTTTGGAAGATCCTTGGACATCACTAAATTCACCAGCTACCCTGAGCTACGC
AGTGAGCTTGCTCGTATGTTTGGCCTGGAAGGTGAGTTGGAGGACCCTGTGAGATCAGGC
TGGCAGCTTGTATTCGTTGACCAAGAGAATGACGTTCTTCTCCTTGGTGATGGCCCGTGG
CCGGAATTTGTAAATAGTGTAGGGTGCATCAAGATACTTTCCCCTCAGGAAGTGCAGCAA
ATGGGCAACAATGGCCTTGAGCTTCTTAACTCTGTCCCCATTCAGAGGCTCTCTAACGGC
GTCTGTGACGACTACGCAGGCCGTGAGGACCCAAGAAATTTAAGCACTGGGATAACAATT
GTGGGGTCTTTAAACTACTGA

Peptide Sequence

PEP ID

RCW19403
PEP Infomation

pep chromosome:Glycine_max_v2.1:5:33756641:33762577:-1 gene:GLYMA_05G143800 transcript:RCW19403 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

MKLSSSGFSSPPQEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNRE
VDGHIPNYPSLPPQLICQLHNVTMHADTETDEVYAQMTLQPLNPQEQKEAYLPAELGTPS
KQPTNYFCKILTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHGNEWKFR
HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQPVMPSSVL
SSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPFAKYVKAVYHTRVSVGMRFRM
LFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
TFPMYPSPFPLRLKRPWPPGLPSFHAGLKDDDFDMYQAMAAAALQDMWTSDPSKQHPTSA
IQFQQQQNFPNRTSALMQTQMLQQSQPQQAFPNSQENSHPSPSPSQSQAQTQTHFQQHLQ
HQHSFNTQNQHNLLQQQQQSQLQQQQVVDHQQISSAVSTMSQFVSAPQSQSPPMQAISSL
GHQQSFSDSNGNPVTTAVVSPLHSILGSFPQDDTSHLLNLPRSTSWVPVQHSTAWPSSKR
VAVDPLFSSGASQCVLPQVEQLGQPQSTMAQNGIALPPFPGRECTIEGSNDPQNHLLFGV
NIEPSSLLMHNGMSSLKGVSSNSDSPTIPFQSSNYLNTTVPDSSLNPGMTHNIGESGFLQ
TPENGGQGNPTNKTFVKVYKSGSFGRSLDITKFTSYPELRSELARMFGLEGELEDPVRSG
WQLVFVDQENDVLLLGDGPWPEFVNSVGCIKILSPQEVQQMGNNGLELLNSVPIQRLSNG
VCDDYAGREDPRNLSTGITIVGSLNY

Transcript Sequence

Transcript ID

RCW19403
Transcript Infomation

cdna chromosome:Glycine_max_v2.1:5:33756641:33762577:-1 gene:GLYMA_05G143800 gene_biotype:protein_coding transcript_biotype:protein_coding description:hypothetical protein
Sequence

ATGAAACTTTCTTCATCGGGTTTTAGTTCTCCACCTCAGGAAGGAGAAAAGCGAGTTCTA
GATTCAGAACTTTGGCATGCTTGTGCTGGTCCTCTTGTTTCTTTACCAGCTGTTGGAAGC
CGAGTGGTATACTTTCCACAAGGTCACAGTGAACAGGTTGCTGTGTCTACCAACAGGGAA
GTGGATGGCCATATACCTAACTATCCAAGCTTACCACCGCAGCTTATTTGTCAACTTCAT
AATGTGACTATGCATGCAGATACTGAGACAGATGAAGTGTATGCTCAGATGACCTTGCAA
CCTCTTAATCCTCAAGAACAGAAGGAGGCATACCTTCCAGCTGAGTTGGGCACACCGAGT
AAACAGCCAACAAACTACTTCTGCAAAATTTTGACAGCCAGTGACACTAGCACTCATGGG
GGATTCTCTGTTCCTCGCAGGGCAGCTGAAAAAGTTTTTCCTCCATTGGACTTTTCACAA
CAGCCTCCTTGTCAAGAGTTAATTGCAAGGGATTTGCATGGTAATGAGTGGAAATTTAGA
CATATCTTCCGTGGCCAGCCCAAAAGGCATCTACTTACAACAGGATGGAGTGTCTTTGTG
AGTGCTAAAAGACTTGTTGCTGGTGATTCAGTGCTGTTTATCTGGAATGAAAAGAATCAA
TTGCTTCTTGGCATTCGGCGGGCTAATCGACCTCAACCAGTGATGCCTTCATCAGTGTTG
TCAAGTGATAGCATGCACTTGGGGCTTCTTGCTGCTGCAGCTCATGCGGCTGCAACTAAT
AGTCGTTTTACCATCTTTTATAACCCACGTGCTAGCCCATCAGAATTTGTCATACCTTTT
GCAAAGTATGTTAAAGCCGTGTATCATACTCGAGTTTCAGTTGGTATGCGCTTCAGGATG
CTGTTTGAAACAGAGGAATCCAGTGTGCGTCGATACATGGGCACAATAACTGGCATTAGT
GACTTGGATTCAGTCCGGTGGCCAAATTCACATTGGCGCTCAGTCAAGGTTGGCTGGGAT
GAATCCACAGCAGGAGAGAGGCAACCTCGAGTGTCTTTATGGGAAATTGAGCCATTAACA
ACATTTCCAATGTATCCATCTCCATTCCCCCTTAGGCTTAAGAGACCGTGGCCTCCAGGA
CTGCCTTCATTCCATGCAGGCTTGAAGGATGATGATTTTGATATGTACCAAGCTATGGCT
GCCGCTGCACTTCAGGATATGTGGACTTCAGATCCTTCCAAACAGCATCCTACGTCCGCA
ATTCAATTTCAGCAACAGCAGAACTTCCCCAACAGGACTTCTGCCTTAATGCAAACCCAA
ATGTTGCAGCAGTCTCAACCTCAGCAGGCTTTTCCAAATAGTCAAGAAAATTCACATCCA
TCTCCATCTCCATCTCAATCTCAGGCTCAAACTCAAACACACTTTCAGCAGCATCTACAG
CATCAGCACTCATTCAATACTCAGAATCAGCATAATCTTCTGCAGCAGCAGCAACAATCG
CAATTGCAACAGCAACAAGTGGTAGATCATCAGCAGATTTCAAGTGCCGTCTCTACAATG
TCTCAGTTTGTTTCAGCACCTCAGTCTCAATCACCACCAATGCAAGCTATCTCTTCACTT
GGCCATCAGCAAAGCTTTTCTGATTCAAATGGGAACCCTGTGACTACTGCTGTTGTTTCT
CCCCTGCATAGTATATTGGGTTCATTTCCCCAGGATGACACATCTCACCTTCTCAACCTT
CCTAGATCCACCTCTTGGGTTCCTGTTCAACATTCAACTGCATGGCCGTCCTCCAAGCGT
GTTGCAGTGGATCCTCTCTTTTCTTCTGGAGCATCTCAATGTGTTCTACCTCAAGTGGAG
CAGTTAGGGCAGCCACAGAGTACCATGGCTCAAAATGGCATTGCATTGCCACCCTTTCCT
GGTAGGGAGTGTACAATAGAAGGAAGCAATGATCCACAAAATCATCTTTTGTTTGGTGTC
AATATAGAGCCCTCATCACTCCTAATGCATAATGGGATGTCAAGTCTTAAGGGAGTCAGC
AGCAACAGTGACTCACCCACCATACCTTTTCAATCATCTAATTACCTGAACACCACAGTA
CCTGATTCTTCATTGAATCCTGGAATGACACACAATATTGGTGAATCGGGCTTCCTGCAA
ACTCCAGAAAATGGGGGGCAAGGAAACCCAACTAACAAAACCTTTGTGAAGGTTTACAAG
TCAGGGTCCTTTGGAAGATCCTTGGACATCACTAAATTCACCAGCTACCCTGAGCTACGC
AGTGAGCTTGCTCGTATGTTTGGCCTGGAAGGTGAGTTGGAGGACCCTGTGAGATCAGGC
TGGCAGCTTGTATTCGTTGACCAAGAGAATGACGTTCTTCTCCTTGGTGATGGCCCGTGG
CCGGAATTTGTAAATAGTGTAGGGTGCATCAAGATACTTTCCCCTCAGGAAGTGCAGCAA
ATGGGCAACAATGGCCTTGAGCTTCTTAACTCTGTCCCCATTCAGAGGCTCTCTAACGGC
GTCTGTGACGACTACGCAGGCCGTGAGGACCCAAGAAATTTAAGCACTGGGATAACAATT
GTGGGGTCTTTAAACTACTGA