Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Glycine max

CDS Sequence

CDS ID

KRH20368
CDS Infomation

cds chromosome:Glycine_max_v2.1:13:28761503:28763755:1 gene:GLYMA_13G173500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IFS2 description:hypothetical protein
Sequence

ATGTTGCTTGAACTTGCACTTGGTTTATTGGTTTTGGCTCTGTTTCTGCACTTGCGTCCC
ACACCCACTGCAAAATCAAAAGCACTTCGCCATCTCCCAAACCCACCAAGCCCAAAGCCT
CGTCTTCCCTTCATAGGACACCTTCATCTCTTAAAAGACAAACTTCTCCACTACGCACTC
ATCGACCTCTCCAAAAAACATGGTCCCTTATTCTCTCTCTACTTTGGCTCCATGCCAACC
GTTGTTGCCTCCACACCAGAATTGTTCAAGCTCTTCCTCCAAACGCACGAGGCAACTTCC
TTCAACACAAGGTTCCAAACCTCAGCCATAAGACGCCTCACCTATGATAGCTCAGTGGCC
ATGGTTCCCTTCGGACCTTACTGGAAGTTCGTGAGGAAGCTCATCATGAACGACCTTCTC
AACGCCACCACTGTAAACAAGTTGAGGCCTTTGAGGACCCAACAGATCCGCAAGTTCCTT
AGGGTTATGGCCCAAGGCGCAGAGGCACAGAAGCCCCTTGACTTGACCGAGGAGCTTCTG
AAATGGACCAACAGCACCATCTCCATGATGATGCTCGGCGAGGCTGAGGAGATCAGAGAC
ATCGCTCGCGAGGTTCTTAAGATCTTTGGCGAATACAGCCTCACTGACTTCATCTGGCCA
TTGAAGCATCTCAAGGTTGGAAAGTATGAGAAGAGGATCGACGACATCTTGAACAAGTTC
GACCCTGTCGTTGAAAGGGTCATCAAGAAGCGCCGTGAGATCGTGAGGAGGAGAAAGAAC
GGAGAGGTTGTTGAGGGTGAGGTCAGCGGGGTTTTCCTTGACACTTTGCTTGAATTCGCT
GAGGATGAGACCATGGAGATCAAAATCACCAAGGACCACATCAAGGGTCTTGTTGTCGAC
TTTTTCTCGGCAGGAACAGACTCCACAGCGGTGGCAACAGAGTGGGCATTGGCAGAACTC
ATCAACAATCCTAAGGTGTTGGAAAAGGCTCGTGAGGAGGTCTACAGTGTTGTGGGAAAG
GACAGACTTGTGGACGAAGTTGACACTCAAAACCTTCCTTACATTAGAGCAATCGTGAAG
GAGACATTCCGCATGCACCCGCCACTCCCAGTGGTCAAAAGAAAGTGCACAGAAGAGTGT
GAGATTAATGGATATGTGATCCCAGAGGGAGCATTGATTCTCTTCAATGTATGGCAAGTA
GGAAGAGACCCCAAATACTGGGACAGACCATCGGAGTTCCGTCCTGAGAGGTTCCTAGAG
ACAGGGGCTGAAGGGGAAGCAGGGCCTCTTGATCTTAGGGGACAACATTTTCAACTTCTC
CCATTTGGGTCTGGGAGGAGAATGTGCCCTGGAGTCAATCTGGCTACTTCGGGAATGGCA
ACACTTCTTGCATCTCTTATTCAGTGCTTCGACTTGCAAGTGCTGGGTCCACAAGGACAG
ATATTGAAGGGTGGTGACGCCAAAGTTAGCATGGAAGAGAGAGCCGGCCTCACTGTTCCA
AGGGCACATAGTCTTGTCTGTGTTCCACTTGCAAGGATCGGCGTTGCATCTAAACTCCTT
TCTTAA

Peptide Sequence

PEP ID

KRH20368
PEP Infomation

pep chromosome:Glycine_max_v2.1:13:28761503:28763755:1 gene:GLYMA_13G173500 transcript:KRH20368 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IFS2 description:hypothetical protein
Sequence

MLLELALGLLVLALFLHLRPTPTAKSKALRHLPNPPSPKPRLPFIGHLHLLKDKLLHYAL
IDLSKKHGPLFSLYFGSMPTVVASTPELFKLFLQTHEATSFNTRFQTSAIRRLTYDSSVA
MVPFGPYWKFVRKLIMNDLLNATTVNKLRPLRTQQIRKFLRVMAQGAEAQKPLDLTEELL
KWTNSTISMMMLGEAEEIRDIAREVLKIFGEYSLTDFIWPLKHLKVGKYEKRIDDILNKF
DPVVERVIKKRREIVRRRKNGEVVEGEVSGVFLDTLLEFAEDETMEIKITKDHIKGLVVD
FFSAGTDSTAVATEWALAELINNPKVLEKAREEVYSVVGKDRLVDEVDTQNLPYIRAIVK
ETFRMHPPLPVVKRKCTEECEINGYVIPEGALILFNVWQVGRDPKYWDRPSEFRPERFLE
TGAEGEAGPLDLRGQHFQLLPFGSGRRMCPGVNLATSGMATLLASLIQCFDLQVLGPQGQ
ILKGGDAKVSMEERAGLTVPRAHSLVCVPLARIGVASKLLS

Transcript Sequence

Transcript ID

KRH20368
Transcript Infomation

cdna chromosome:Glycine_max_v2.1:13:28761503:28763755:1 gene:GLYMA_13G173500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IFS2 description:hypothetical protein
Sequence

AACAACAAAATTCCCCATAAGTAGAGTATGGTGGAGTAGATGCTTATAAATTGGAATCTT
AGAAGGTTGTTTCCTCAGGCCAAGAGCTTGGAAAATTAGCCTCACAAAAGCAAAGATCAA
ACAAACCAAGGACGAGAACACGATGTTGCTTGAACTTGCACTTGGTTTATTGGTTTTGGC
TCTGTTTCTGCACTTGCGTCCCACACCCACTGCAAAATCAAAAGCACTTCGCCATCTCCC
AAACCCACCAAGCCCAAAGCCTCGTCTTCCCTTCATAGGACACCTTCATCTCTTAAAAGA
CAAACTTCTCCACTACGCACTCATCGACCTCTCCAAAAAACATGGTCCCTTATTCTCTCT
CTACTTTGGCTCCATGCCAACCGTTGTTGCCTCCACACCAGAATTGTTCAAGCTCTTCCT
CCAAACGCACGAGGCAACTTCCTTCAACACAAGGTTCCAAACCTCAGCCATAAGACGCCT
CACCTATGATAGCTCAGTGGCCATGGTTCCCTTCGGACCTTACTGGAAGTTCGTGAGGAA
GCTCATCATGAACGACCTTCTCAACGCCACCACTGTAAACAAGTTGAGGCCTTTGAGGAC
CCAACAGATCCGCAAGTTCCTTAGGGTTATGGCCCAAGGCGCAGAGGCACAGAAGCCCCT
TGACTTGACCGAGGAGCTTCTGAAATGGACCAACAGCACCATCTCCATGATGATGCTCGG
CGAGGCTGAGGAGATCAGAGACATCGCTCGCGAGGTTCTTAAGATCTTTGGCGAATACAG
CCTCACTGACTTCATCTGGCCATTGAAGCATCTCAAGGTTGGAAAGTATGAGAAGAGGAT
CGACGACATCTTGAACAAGTTCGACCCTGTCGTTGAAAGGGTCATCAAGAAGCGCCGTGA
GATCGTGAGGAGGAGAAAGAACGGAGAGGTTGTTGAGGGTGAGGTCAGCGGGGTTTTCCT
TGACACTTTGCTTGAATTCGCTGAGGATGAGACCATGGAGATCAAAATCACCAAGGACCA
CATCAAGGGTCTTGTTGTCGACTTTTTCTCGGCAGGAACAGACTCCACAGCGGTGGCAAC
AGAGTGGGCATTGGCAGAACTCATCAACAATCCTAAGGTGTTGGAAAAGGCTCGTGAGGA
GGTCTACAGTGTTGTGGGAAAGGACAGACTTGTGGACGAAGTTGACACTCAAAACCTTCC
TTACATTAGAGCAATCGTGAAGGAGACATTCCGCATGCACCCGCCACTCCCAGTGGTCAA
AAGAAAGTGCACAGAAGAGTGTGAGATTAATGGATATGTGATCCCAGAGGGAGCATTGAT
TCTCTTCAATGTATGGCAAGTAGGAAGAGACCCCAAATACTGGGACAGACCATCGGAGTT
CCGTCCTGAGAGGTTCCTAGAGACAGGGGCTGAAGGGGAAGCAGGGCCTCTTGATCTTAG
GGGACAACATTTTCAACTTCTCCCATTTGGGTCTGGGAGGAGAATGTGCCCTGGAGTCAA
TCTGGCTACTTCGGGAATGGCAACACTTCTTGCATCTCTTATTCAGTGCTTCGACTTGCA
AGTGCTGGGTCCACAAGGACAGATATTGAAGGGTGGTGACGCCAAAGTTAGCATGGAAGA
GAGAGCCGGCCTCACTGTTCCAAGGGCACATAGTCTTGTCTGTGTTCCACTTGCAAGGAT
CGGCGTTGCATCTAAACTCCTTTCTTAATTAAGATCATCGTCATCATCATCATATGTAAT
ATTTACTTTTTGTGTGTTGATAATCATCATTTCAATAAGGTCTCATTCATCTACTTTTTA
TGAAGTATATAAGCCCTTCCATGCACATTGTATCATCTCCCATTTGTCTTCGTTTGCTAC
CTAAGGCAATCTTTTTTTTTTTTTGAATCACATCATCTACTATAAACTATCAATCCTTAT
ATTAATTTTGAGTTGCCACATCATTTATCCCAATTTCAATATTTCATTTTCAATTTATAA
GATGAGTAATTCATTCCATCTGTCCTGTATCGTGGTTGGATTCTAGATAAGATTCAAATA
ATTTTAATTTTGTAAAACTTTCTATCCTCCAAAATAAGTTATTGAAAATTGCTATTCCAG
TACAAAGATTGGTGCCC