Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre17.g738200.t1.2
CDS Infomation

pacid=30781953 polypeptide=Cre17.g738200.t1.2 locus=Cre17.g738200 ID=Cre17.g738200.t1.2.v5.5 annot-version=v5.6
Sequence

ATGGCGCTCGCACGGAGGCCAATTTACCAGCCGGTGCAGCCTCAACAGCCCGTGTTTCTT
AATTTGTCACAAGTCTCTGACAAGCAAGTCATCACGCGCAACACCGGCAAAAACCTGGGC
ACCATGGGCGAGGCCTGGGTCGACCCGCAACGCCTGGAGGTTGTGTCGTTTGAGGTCGAG
AGCAAGCGTGGTGTCGGCAGCTCAGTCACCGGCAACGTGCCGCTGGCGATGCTGAAGCAA
ATTGGGGATGTTGTTCTGGTCCAGGACGAGTTGCCACCCGACCAGGTGCCGTTGGACGCC
CGGTACGGCTTCGTCAAGCTGCTGGGATTGGAAGTGCGGACGCGGATGGGACGCGTGCTG
GGCAAGATCCGCGACATCACCTTCAATCCCGACACCGGCGCCATTTCCCGCATCGAGTAC
GACGACTTTGGGCTGCGCTTCCTGCCGGTCAACTTTTTCGACACGTTCAGCGTGCCAGCG
GAGCTGGTGGAATCTGCGGTGCTAGGCTATGTGCTGGTGGCTTCCGAGGGCGAGGCGTAC
CAGCGCCAGGAAAAGCAGGGCATCCTGTCGGGCATCCTGCGCGGCCTGGGCACGCGGCCA
CAGTCCATGGGGCTGCTGCTGACGGACGGCGGCCGCAACGAGGTGGCCGGCTACCTGCCG
CAGAACTACACGTACGAGAAGTGGGAGTCTGACATCCGGCGCTGGGAGGCGGAGACGGGC
ATGCGCTACGAGGAGTACATGATGGCGCAGCAGCAGCGCATGGGCGGCGGAGGGCCGGCG
GGCATGCTGCCGGCGCCAGGAGGCAGCACCGCCGCCGGCTACATGGCCCGCGGGCCCCAG
CAGCAGCAGCAGCAGCAGCAGCCGATGGGGGCGCAGCCAGGCTTGGGCAGGCCCGGGATG
GGCATGGGTGCGGGGCCGGGGCAGCAGCAGCAGCAGCAGCAGCGTTACGGGCCGGGCCCG
GCGGCGGCACCTGGCACGCCGGGCGGGTCGGGGGCGACGCGGCCGGGCATGCGGCCAGGC
GTGCCGGGGGCGCCGGCGCCTGGGGCGCTGCCGCCTCAGCAGCCTCAGCAGCAGCAGTAC
GGGGCTGCGGGTGCGGCGCCCGGGACGGCCTATGGAGCCGGGTACGGCGCAGGAGCGGAC
CCCAGGTTCCGGGGGGCAGCGCCGGCGGGCGCCGCACCGCCGCGTTTCGGCGGCCCTCAG
CAGCAGCCGGCACAGCAGCAGCAGGCGGGCTGGCCGGCCCAGCAACAGGCGCAGCAGCAG
CAGCAGGGTGGGGCTGCCGGCTGGCCGCCTGCCGGCGCCCCGACACCGGTGCAGCAGCGG
CAGCAGCCGCAGCAGCAGCCGGGAGGAGGCGGGCGACCGGGGGCTCAGGGCGCCCCGCAG
CAGCAGGCGGCGCCGCAGCAAGCGCAGCAGGCGGGGCAGTATGGCTGGCCGGCGTCGGAC
GGCGGTGCAGCGGGCGGGCCGGGCGCGGGCTCCGGACCGTCAGCATCCGCGAATGGCAAC
GGCAGCGGCGCAAGCGGCGGCGCGATGCGGGTAGAGGAGTGGCTTGCGCGAGAGGGCGTG
GCGCAGCCGCAGCCGGTGCAGGCAGAGCCGGCGGCGATGGCGAACGGCTGGGAGGGGCAG
GGCGGCCGCGGCGGCGCACAGTATTGA

Peptide Sequence

PEP ID

Cre17.g738200.t1.2
PEP Infomation

pacid=30781953 transcript=Cre17.g738200.t1.2 locus=Cre17.g738200 ID=Cre17.g738200.t1.2.v5.5 annot-version=v5.6
Sequence

MALARRPIYQPVQPQQPVFLNLSQVSDKQVITRNTGKNLGTMGEAWVDPQRLEVVSFEVE
SKRGVGSSVTGNVPLAMLKQIGDVVLVQDELPPDQVPLDARYGFVKLLGLEVRTRMGRVL
GKIRDITFNPDTGAISRIEYDDFGLRFLPVNFFDTFSVPAELVESAVLGYVLVASEGEAY
QRQEKQGILSGILRGLGTRPQSMGLLLTDGGRNEVAGYLPQNYTYEKWESDIRRWEAETG
MRYEEYMMAQQQRMGGGGPAGMLPAPGGSTAAGYMARGPQQQQQQQQPMGAQPGLGRPGM
GMGAGPGQQQQQQQRYGPGPAAAPGTPGGSGATRPGMRPGVPGAPAPGALPPQQPQQQQY
GAAGAAPGTAYGAGYGAGADPRFRGAAPAGAAPPRFGGPQQQPAQQQQAGWPAQQQAQQQ
QQGGAAGWPPAGAPTPVQQRQQPQQQPGGGGRPGAQGAPQQQAAPQQAQQAGQYGWPASD
GGAAGGPGAGSGPSASANGNGSGASGGAMRVEEWLAREGVAQPQPVQAEPAAMANGWEGQ
GGRGGAQY*

Transcript Sequence

Transcript ID

Cre17.g738200.t1.2
Transcript Infomation

pacid=30781953 locus=Cre17.g738200 annot-version=v5.6
Sequence

CAGATAGTAAAAATGAATCTCAACACGTCTCAACGCGTGCGCACTGACGCGAGCACTAGC
TCGCCTGCAACTCGCGTGCCTCCGCACTGGCGGAGGTCGCAAAGCGTTCCGGTGACGCCT
TCAATTGCATCTAAGCCATCCTATGGCTCCAAGAGTACCATCATTTGTAACGCACAACAG
TATGGCCGTGGCCAGCCGCCGAACCAGCCTCAGCAGCCGATGGCGCTCGCACGGAGGCCA
ATTTACCAGCCGGTGCAGCCTCAACAGCCCGTGTTTCTTAATTTGTCACAAGTCTCTGAC
AAGCAAGTCATCACGCGCAACACCGGCAAAAACCTGGGCACCATGGGCGAGGCCTGGGTC
GACCCGCAACGCCTGGAGGTTGTGTCGTTTGAGGTCGAGAGCAAGCGTGGTGTCGGCAGC
TCAGTCACCGGCAACGTGCCGCTGGCGATGCTGAAGCAAATTGGGGATGTTGTTCTGGTC
CAGGACGAGTTGCCACCCGACCAGGTGCCGTTGGACGCCCGGTACGGCTTCGTCAAGCTG
CTGGGATTGGAAGTGCGGACGCGGATGGGACGCGTGCTGGGCAAGATCCGCGACATCACC
TTCAATCCCGACACCGGCGCCATTTCCCGCATCGAGTACGACGACTTTGGGCTGCGCTTC
CTGCCGGTCAACTTTTTCGACACGTTCAGCGTGCCAGCGGAGCTGGTGGAATCTGCGGTG
CTAGGCTATGTGCTGGTGGCTTCCGAGGGCGAGGCGTACCAGCGCCAGGAAAAGCAGGGC
ATCCTGTCGGGCATCCTGCGCGGCCTGGGCACGCGGCCACAGTCCATGGGGCTGCTGCTG
ACGGACGGCGGCCGCAACGAGGTGGCCGGCTACCTGCCGCAGAACTACACGTACGAGAAG
TGGGAGTCTGACATCCGGCGCTGGGAGGCGGAGACGGGCATGCGCTACGAGGAGTACATG
ATGGCGCAGCAGCAGCGCATGGGCGGCGGAGGGCCGGCGGGCATGCTGCCGGCGCCAGGA
GGCAGCACCGCCGCCGGCTACATGGCCCGCGGGCCCcagcagcagcagcagcagcagcag
cCGATGGGGGCGCAGCCAGGCTTGGGCAGGCCCGGGATGGGCATGGGTGCGGGGCCGGGg
cagcagcagcagcagcagcagcGTTAcgggccgggcccggcggcggcacctggcacgccg
ggcgggtcgggggcgacgcggccgggcatgcggccaggcgtgccgggggcgccggcgcct
ggggcgcTGCCGCCTCAGCAGCCTCAGCAGCAGCAGTACGGGGCTGCGGGTGCGGCGCCC
GGGACGGCCTATGGAGCCGGGTACGGCGCAGGAGCGGACCCCAGGTTccggggggcagcg
ccggcgggcgccgcaccgccgcgTTTCGGCGGCCCTcagcagcagccggcacagcagcag
caggcgggctggccggcccagcaacaggcgcagcagcagcagcagGGTGGGGCTGCCGGC
TGGCCGCCTGCCGGCGCCCCGACACCGGTgcagcagcggcagcagccgcagcagcagcCG
GGAGGAGGCGGGCGACCGGGGGCTCAGGGCGCCCCGCAGCAGCAGGCGGCGCCGCAGCAA
GCGCAGCAGGCGGGGCAGTATGGCTGGCCGGCGTCGGACGGCGGTGCAgcgggcgggccg
ggcgcgggcTCCGGACCGTCAGCATCCGCGAATGGCAACGGCAGCGGCGCAAGCGGCGGC
GCGATGCGGGTAGAGGAGTGGCTTGCGCGAGAGGGCGTGGCGCAGCCGCAGCCGGTGCAG
GCAGAGCCGGCGGCGATGGCGAACGGCTGGGAGGGGCAGGGCGGCCGCGGCGGCGCACAG
TATTGAGCTGGCGGCTGCTGTAGATGGTTACTGACGGCGGCGGCGTGTCTCGGTGGACTT
GGCAACTGCCCAAGGGGGGCGGTGTACGGTAATAGGGTGGCAGCGGAGCGGAGCGTCGGT
ACAATTGCACGTTTGGCCGATTGCGCTGCTGGCGGTCGGCGTCGACCAAGTGCGCCCAAC
ACGCGTGCTCATGCTGGAAAACCAGAATCCGGGAGCACGGTTGCGGGACGAGGGAGGCGG
CTGCGCTTTTTGCGGGTGGCAGGTAGCGGACGGCGGCGCTGGCATGGATGGGGCAGGGAA
CCAGGTGTGGGGGTTATCAGAACCGAATCCTCAAGTCCGCCGAGCTGCACTGCAGTGGGA
ACCAGGTGTGGGGGGAACATGTACGCATGAGACAGATGGGCAGCAGCAGGTTAACAAGAT
GCGCGTGAGGTGCTGTGTGTTGTGACGGTTCCGCGCTGACACATAGGCAGACATTTGGAT
GTAGGCAGGATATCATAAGCGCAGGAGGCCACGGGCTCAAGGCAGTGCAGGCATGTGTGG
GTGTGTGAAACAACGAAGACGGGATGAGATATGTGTTGTGTGTGCGTGTATGGCATTGTC
ATGCTTTGCAGACTCCGCCATCTTACATTGGGGGCGCCAAGAACTGTTGTATATTGTGTA
CCGAAGGCGCAAGAAGTACATCATACATTGCGCAAGGGACGATCGAGTACTGAACTGTAG
GCGAGGGGAGGAATGAATAAGCCTCTGGGTCACGCGGATGTGCAAACGGGACGGGCACGC
CGCCATGCAGGGCCATGTGCATGTAACATGAGTGGTTG